RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 H3BT86 120 aa10.27□□□□□ -0.77
TCOF1-202ENST00000377797 A0A1B0GX51 115 aa10.27□□□□□ -0.77
TCOF1-202ENST00000377797 DIRC1Q969H9 104 aa10.27□□□□□ -0.77
TCOF1-202ENST00000377797 ATOX1O00244 68 aa10.26□□□□□ -0.77
TCOF1-202ENST00000377797 TRIAP1O43715 76 aa10.26□□□□□ -0.77
TCOF1-202ENST00000377797 IGKV2-24A0A0C4DH68 120 aa10.25□□□□□ -0.77
TCOF1-202ENST00000377797 SYCNQ0VAF6 134 aa10.25□□□□□ -0.77
TCOF1-202ENST00000377797 KRTAP1-1Q07627 177 aa10.24□□□□□ -0.77
TCOF1-202ENST00000377797 MYO15AQ9UKN7 3530 aa10.24□□□□□ -0.77
TCOF1-202ENST00000377797 ZZEF1O43149 2961 aa10.24□□□□□ -0.77
TCOF1-202ENST00000377797 A0A087WZ39 114 aa10.24□□□□□ -0.77
TCOF1-202ENST00000377797 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
TCOF1-202ENST00000377797 CELA1Q9UNI1 258 aa10.24□□□□□ -0.77
TCOF1-202ENST00000377797 PKIGQ9Y2B9 76 aa10.24□□□□□ -0.77
TCOF1-202ENST00000377797 TMEM258P61165 79 aa10.23□□□□□ -0.77
TCOF1-202ENST00000377797 Q8IZM0 81 aa10.23□□□□□ -0.77
TCOF1-202ENST00000377797 LOC400499M0QZD8 3231 aa10.23□□□□□ -0.77
TCOF1-202ENST00000377797 TRBV30A0A0K0K1B3 111 aa10.23□□□□□ -0.77
TCOF1-202ENST00000377797 X6R8D5 127 aa10.23□□□□□ -0.77
TCOF1-202ENST00000377797 MT-ATP8P03928 68 aa10.22□□□□□ -0.77
TCOF1-202ENST00000377797 hADV29S1A0JD25 119 aa10.21□□□□□ -0.77
TCOF1-202ENST00000377797 A0A1B0GUV1 79 aa10.21□□□□□ -0.77
TCOF1-202ENST00000377797 J3KT08 172 aa10.21□□□□□ -0.77
TCOF1-202ENST00000377797 CYSRT1A8MQ03 144 aa10.2□□□□□ -0.78
TCOF1-202ENST00000377797 C14orf177Q52M58 125 aa10.2□□□□□ -0.78
TCOF1-202ENST00000377797 A8MTW9 85 aa10.19□□□□□ -0.78
TCOF1-202ENST00000377797 UNQ6190/PRO20217Q6UXQ8 127 aa10.19□□□□□ -0.78
TCOF1-202ENST00000377797 TEX15Q9BXT5 2789 aa10.19□□□□□ -0.78
TCOF1-202ENST00000377797 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-202ENST00000377797 COX7BP24311 80 aa10.19□□□□□ -0.78
TCOF1-202ENST00000377797 ADAMTSL4-AS1Q5T5F5 129 aa10.19□□□□□ -0.78
TCOF1-202ENST00000377797 C5orf47Q569G3 176 aa10.18□□□□□ -0.78
TCOF1-202ENST00000377797 C6orf99Q4VX62 202 aa10.18□□□□□ -0.78
TCOF1-202ENST00000377797 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
TCOF1-202ENST00000377797 WFDC9Q8NEX5 89 aa10.18□□□□□ -0.78
TCOF1-202ENST00000377797 WFDC10BQ8IUB3 73 aa10.17□□□□□ -0.78
TCOF1-202ENST00000377797 JMJD7-PLA2G4BH0Y9G9 81 aa10.16□□□□□ -0.78
TCOF1-202ENST00000377797 TMEM256-PLSCR3K7ERE1 68 aa10.16□□□□□ -0.78
TCOF1-202ENST00000377797 C9orf116Q5BN46 136 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-202ENST00000377797 NDUFV3P56181 108 aaKnown RBP10.16□□□□□ -0.78
TCOF1-202ENST00000377797 LINC00643Q86TS7 51 aa10.16□□□□□ -0.78
TCOF1-202ENST00000377797 KALRNO60229 2985 aa10.16□□□□□ -0.78
TCOF1-202ENST00000377797 TEX49A0A1B0GTD5 131 aa10.15□□□□□ -0.78
TCOF1-202ENST00000377797 KRTAP10-3P60369 221 aa10.15□□□□□ -0.78
TCOF1-202ENST00000377797 SLPIP03973 132 aa10.15□□□□□ -0.79
TCOF1-202ENST00000377797 USP34Q70CQ2 3546 aa10.14□□□□□ -0.79
TCOF1-202ENST00000377797 LRBAP50851 2863 aa10.14□□□□□ -0.79
TCOF1-202ENST00000377797 COX17Q14061 63 aa10.14□□□□□ -0.79
TCOF1-202ENST00000377797 GCN1Q92616 2671 aaKnown RBP10.14□□□□□ -0.79
TCOF1-202ENST00000377797 SMIM11BQ8TCY0 68 aa10.13□□□□□ -0.79
TCOF1-202ENST00000377797 M0R2N4 97 aa10.13□□□□□ -0.79
TCOF1-202ENST00000377797 UBE2AP49459 152 aa10.13□□□□□ -0.79
TCOF1-202ENST00000377797 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
TCOF1-202ENST00000377797 FUSP35637 526 aaKnown RBP eCLIP10.12□□□□□ -0.79
TCOF1-202ENST00000377797 CR1P17927 2039 aa10.12□□□□□ -0.79
TCOF1-202ENST00000377797 C19orf73Q9NVV2 129 aa10.12□□□□□ -0.79
TCOF1-202ENST00000377797 IGHV3OR16-9A0A0B4J2B5 98 aa10.12□□□□□ -0.79
TCOF1-202ENST00000377797 LST1O00453 97 aa10.12□□□□□ -0.79
TCOF1-202ENST00000377797 FAM19A5Q7Z5A7 132 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-202ENST00000377797 H3BQ85 93 aa10.11□□□□□ -0.79
TCOF1-202ENST00000377797 CSNK1G2-AS1Q8NCQ2 148 aa10.11□□□□□ -0.79
TCOF1-202ENST00000377797 Q8NAQ8 132 aa10.11□□□□□ -0.79
TCOF1-202ENST00000377797 M0QXV9 152 aa10.1□□□□□ -0.79
TCOF1-202ENST00000377797 HIGD2AQ9BW72 106 aa10.1□□□□□ -0.79
TCOF1-202ENST00000377797 TACC2O95359 2948 aa10.1□□□□□ -0.79
TCOF1-202ENST00000377797 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
TCOF1-202ENST00000377797 NREPQ16612 68 aa10.1□□□□□ -0.79
TCOF1-202ENST00000377797 CFAP47Q6ZTR5 3102 aa10.1□□□□□ -0.79
TCOF1-202ENST00000377797 IGKV2-28A0A075B6P5 120 aa10.09□□□□□ -0.79
TCOF1-202ENST00000377797 IGKV2D-28P01615 120 aa10.09□□□□□ -0.79
TCOF1-202ENST00000377797 STAB1Q9NY15 2570 aa10.09□□□□□ -0.79
TCOF1-202ENST00000377797 TRAV23DV6A0A075B6W5 121 aa10.09□□□□□ -0.79
TCOF1-202ENST00000377797 GIG44P09565 113 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-202ENST00000377797 COL6A5A8TX70 2615 aa10.09□□□□□ -0.79
TCOF1-202ENST00000377797 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
TCOF1-202ENST00000377797 SBSPONQ8IVN8 264 aa10.09□□□□□ -0.79
TCOF1-202ENST00000377797 MUC7Q8TAX7 377 aa10.09□□□□□ -0.79
TCOF1-202ENST00000377797 EGFEM1PQ0D2K5 195 aa10.08□□□□□ -0.8
TCOF1-202ENST00000377797 PRR3P79522 188 aaKnown RBP10.08□□□□□ -0.8
TCOF1-202ENST00000377797 M0R378 163 aa10.07□□□□□ -0.8
TCOF1-202ENST00000377797 CCDC179H3BU77 68 aa10.06□□□□□ -0.8
TCOF1-202ENST00000377797 MUC3AQ02505 3323 aa10.06□□□□□ -0.8
TCOF1-202ENST00000377797 UQCRQO14949 82 aa10.06□□□□□ -0.8
TCOF1-202ENST00000377797 ESRGQ1W209 222 aa10.05□□□□□ -0.8
TCOF1-202ENST00000377797 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
TCOF1-202ENST00000377797 NUPR2A6NF83 97 aa10.05□□□□□ -0.8
TCOF1-202ENST00000377797 Q6ZQY7 126 aa10.05□□□□□ -0.8
TCOF1-202ENST00000377797 UBR5O95071 2799 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-202ENST00000377797 ITPR1Q14643 2758 aa10.05□□□□□ -0.8
TCOF1-202ENST00000377797 NDUFC2O95298 119 aa10.05□□□□□ -0.8
TCOF1-202ENST00000377797 SETXQ7Z333 2677 aaKnown RBP10.05□□□□□ -0.8
TCOF1-202ENST00000377797 USP17L23D6RBM5 183 aa10.04□□□□□ -0.8
TCOF1-202ENST00000377797 SDIM1Q6ZPB5 146 aa10.04□□□□□ -0.8
TCOF1-202ENST00000377797 FAM19A1Q7Z5A9 133 aa10.04□□□□□ -0.8
TCOF1-202ENST00000377797 ITPR2Q14571 2701 aa10.04□□□□□ -0.8
TCOF1-202ENST00000377797 XGP55808 180 aa10.04□□□□□ -0.8
TCOF1-202ENST00000377797 ZNF575Q86XF7 245 aa10.03□□□□□ -0.8
TCOF1-202ENST00000377797 LINC01561Q8N1V8 128 aa10.03□□□□□ -0.8
TCOF1-202ENST00000377797 LOC107984640A0A0U1RRK4 108 aa10.03□□□□□ -0.8
TCOF1-202ENST00000377797 NDUFS5O43920 106 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms