RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 KLK12Q9UKR0 248 aa8.83□□□□□ -1
TRIM40-206ENST00000376724 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
TRIM40-206ENST00000376724 ESRGQ1W209 222 aa8.82□□□□□ -1
TRIM40-206ENST00000376724 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
TRIM40-206ENST00000376724 CARD19Q96LW7 228 aa8.82□□□□□ -1
TRIM40-206ENST00000376724 CHCHD10Q8WYQ3 142 aaPredicted RBP8.81□□□□□ -1
TRIM40-206ENST00000376724 TRAV10A0A0B4J240 114 aa8.81□□□□□ -1
TRIM40-206ENST00000376724 A4D1N5 150 aa8.81□□□□□ -1
TRIM40-206ENST00000376724 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
TRIM40-206ENST00000376724 PSMB2P49721 201 aa8.8□□□□□ -1
TRIM40-206ENST00000376724 CIRBPQ14011 172 aaKnown RBP8.8□□□□□ -1
TRIM40-206ENST00000376724 TEN1Q86WV5 123 aa8.8□□□□□ -1
TRIM40-206ENST00000376724 CFC1BP0CG36 223 aa8.8□□□□□ -1
TRIM40-206ENST00000376724 CFC1P0CG37 223 aa8.8□□□□□ -1
TRIM40-206ENST00000376724 MIAQ16674 131 aa8.8□□□□□ -1
TRIM40-206ENST00000376724 CD164L2Q6UWJ8 174 aa8.8□□□□□ -1
TRIM40-206ENST00000376724 SPANXDQ9BXN6 97 aa8.8□□□□□ -1
TRIM40-206ENST00000376724 SPANXCQ9NY87 97 aa8.8□□□□□ -1
TRIM40-206ENST00000376724 B5MCH6 92 aa8.79□□□□□ -1
TRIM40-206ENST00000376724 LYRM7Q5U5X0 104 aa8.79□□□□□ -1
TRIM40-206ENST00000376724 TIMM17BO60830 172 aa8.78□□□□□ -1
TRIM40-206ENST00000376724 HERV-K104P63124 156 aa8.78□□□□□ -1
TRIM40-206ENST00000376724 COX7A2LO14548 114 aa8.78□□□□□ -1
TRIM40-206ENST00000376724 C6orf226Q5I0X4 101 aa8.78□□□□□ -1
TRIM40-206ENST00000376724 ENHOQ6UWT2 76 aa8.78□□□□□ -1
TRIM40-206ENST00000376724 UBE2WQ96B02 151 aa8.78□□□□□ -1
TRIM40-206ENST00000376724 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
TRIM40-206ENST00000376724 EIF4EBP3O60516 100 aaPredicted RBP8.77□□□□□ -1.01
TRIM40-206ENST00000376724 CRPP02741 224 aa8.77□□□□□ -1.01
TRIM40-206ENST00000376724 NHLRC4P0CG21 123 aaPredicted RBP8.77□□□□□ -1.01
TRIM40-206ENST00000376724 MALP21145 153 aa8.77□□□□□ -1.01
TRIM40-206ENST00000376724 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
TRIM40-206ENST00000376724 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
TRIM40-206ENST00000376724 PRR34Q9NV39 138 aa8.76□□□□□ -1.01
TRIM40-206ENST00000376724 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
TRIM40-206ENST00000376724 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.75□□□□□ -1.01
TRIM40-206ENST00000376724 H7C2G1 150 aa8.75□□□□□ -1.01
TRIM40-206ENST00000376724 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
TRIM40-206ENST00000376724 PRO1854Q9UHT4 67 aa8.75□□□□□ -1.01
TRIM40-206ENST00000376724 IFITM1P13164 125 aa8.74□□□□□ -1.01
TRIM40-206ENST00000376724 Q8IZM0 81 aa8.74□□□□□ -1.01
TRIM40-206ENST00000376724 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
TRIM40-206ENST00000376724 LINC00308Q8TCZ7 52 aa8.74□□□□□ -1.01
TRIM40-206ENST00000376724 B9D2Q9BPU9 175 aa8.74□□□□□ -1.01
TRIM40-206ENST00000376724 TCL1BO95988 128 aa8.73□□□□□ -1.01
TRIM40-206ENST00000376724 PFN2P35080 140 aa8.73□□□□□ -1.01
TRIM40-206ENST00000376724 LINC00158P58513 81 aa8.73□□□□□ -1.01
TRIM40-206ENST00000376724 LINC01561Q8N1V8 128 aa8.73□□□□□ -1.01
TRIM40-206ENST00000376724 NDUFV3P56181 108 aaKnown RBP8.73□□□□□ -1.01
TRIM40-206ENST00000376724 GAGE2BQ13066 116 aa8.73□□□□□ -1.01
TRIM40-206ENST00000376724 GAGE2EQ4V326 116 aa8.73□□□□□ -1.01
TRIM40-206ENST00000376724 ANKRD29Q8N6D5 301 aa8.73□□□□□ -1.01
TRIM40-206ENST00000376724 GAGE2DQ9UEU5 116 aa8.73□□□□□ -1.01
TRIM40-206ENST00000376724 A0A0B4J2C4 111 aa8.72□□□□□ -1.01
TRIM40-206ENST00000376724 M0QXV9 152 aa8.72□□□□□ -1.01
TRIM40-206ENST00000376724 SOSTDC1Q6X4U4 206 aa8.72□□□□□ -1.01
TRIM40-206ENST00000376724 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
TRIM40-206ENST00000376724 DNAH9Q9NYC9 4486 aa8.72□□□□□ -1.01
TRIM40-206ENST00000376724 Q6Q795 121 aa8.71□□□□□ -1.01
TRIM40-206ENST00000376724 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
TRIM40-206ENST00000376724 Q1RN00 199 aa8.71□□□□□ -1.02
TRIM40-206ENST00000376724 LINC00588Q9Y4M8 146 aa8.71□□□□□ -1.02
TRIM40-206ENST00000376724 SNCGO76070 127 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 TTC32Q5I0X7 151 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 LINC01556Q5JQF7 62 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 LINC00526Q96FQ7 95 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 IBA57-AS1B1ANH7 110 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 CCDC179H3BU77 68 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 SCGB1C2P0DMR2 95 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 CCL18P55774 89 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 COPS9Q8WXC6 57 aa8.7□□□□□ -1.02
TRIM40-206ENST00000376724 C6orf223Q8N319 242 aa8.69□□□□□ -1.02
TRIM40-206ENST00000376724 SMIM20Q8N5G0 67 aa8.69□□□□□ -1.02
TRIM40-206ENST00000376724 SPAG11BQ08648 103 aa8.68□□□□□ -1.02
TRIM40-206ENST00000376724 SLC25A20O43772 301 aa8.68□□□□□ -1.02
TRIM40-206ENST00000376724 KLK5Q9Y337 293 aaPredicted RBP8.68□□□□□ -1.02
TRIM40-206ENST00000376724 IGKV2D-24A0A075B6R9 120 aa8.67□□□□□ -1.02
TRIM40-206ENST00000376724 DNAH10OSP0CZ25 163 aa8.67□□□□□ -1.02
TRIM40-206ENST00000376724 Q9HAA7 133 aa8.67□□□□□ -1.02
TRIM40-206ENST00000376724 DNHD1Q96M86 4753 aa8.67□□□□□ -1.02
TRIM40-206ENST00000376724 CXCL5P42830 114 aa8.66□□□□□ -1.02
TRIM40-206ENST00000376724 C9orf116Q5BN46 136 aaPredicted RBP8.66□□□□□ -1.02
TRIM40-206ENST00000376724 C1orf43Q9BWL3 253 aa8.66□□□□□ -1.02
TRIM40-206ENST00000376724 RPL13AP40429 203 aaKnown RBP8.66□□□□□ -1.02
TRIM40-206ENST00000376724 C10orf25Q5T742 122 aa8.65□□□□□ -1.02
TRIM40-206ENST00000376724 KRTAP26-1Q6PEX3 210 aa8.65□□□□□ -1.02
TRIM40-206ENST00000376724 UNQ6190/PRO20217Q6UXQ8 127 aa8.65□□□□□ -1.02
TRIM40-206ENST00000376724 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.03
TRIM40-206ENST00000376724 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
TRIM40-206ENST00000376724 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
TRIM40-206ENST00000376724 SND1-IT1Q9HBX3 110 aa8.64□□□□□ -1.03
TRIM40-206ENST00000376724 C9JAW5 83 aa8.64□□□□□ -1.03
TRIM40-206ENST00000376724 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
TRIM40-206ENST00000376724 TRIAP1O43715 76 aa8.62□□□□□ -1.03
TRIM40-206ENST00000376724 NTN5Q8WTR8 489 aaPredicted RBP8.61□□□□□ -1.03
TRIM40-206ENST00000376724 COX17Q14061 63 aa8.61□□□□□ -1.03
TRIM40-206ENST00000376724 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
TRIM40-206ENST00000376724 TRBV30A0A0K0K1B3 111 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms