RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 LINC00308Q8TCZ7 52 aa9.79□□□□□ -0.84
MSH5-202ENST00000375740 VWFP04275 2813 aa9.78□□□□□ -0.84
MSH5-202ENST00000375740 TRBV6-8A0A0A6YYG3 113 aa9.78□□□□□ -0.84
MSH5-202ENST00000375740 C5orf47Q569G3 176 aa9.78□□□□□ -0.84
MSH5-202ENST00000375740 SMIM1B2RUZ4 78 aa9.78□□□□□ -0.84
MSH5-202ENST00000375740 GAGE2AQ6NT46 116 aa9.78□□□□□ -0.84
MSH5-202ENST00000375740 Q9HAA7 133 aa9.78□□□□□ -0.84
MSH5-202ENST00000375740 J3KT08 172 aa9.77□□□□□ -0.85
MSH5-202ENST00000375740 HIVEP1P15822 2718 aa9.77□□□□□ -0.85
MSH5-202ENST00000375740 F5H768 121 aa9.76□□□□□ -0.85
MSH5-202ENST00000375740 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
MSH5-202ENST00000375740 Q9H8V8 135 aa9.76□□□□□ -0.85
MSH5-202ENST00000375740 IGLV4-60A0A075B6I1 120 aa9.76□□□□□ -0.85
MSH5-202ENST00000375740 TIMM17BO60830 172 aa9.76□□□□□ -0.85
MSH5-202ENST00000375740 TENM1Q9UKZ4 2725 aa9.75□□□□□ -0.85
MSH5-202ENST00000375740 GYPEP15421 78 aa9.75□□□□□ -0.85
MSH5-202ENST00000375740 DEFB135Q30KP9 77 aa9.75□□□□□ -0.85
MSH5-202ENST00000375740 FAM222AQ5U5X8 452 aa9.75□□□□□ -0.85
MSH5-202ENST00000375740 IGKV3OR2-268A0A0C4DH90 116 aa9.74□□□□□ -0.85
MSH5-202ENST00000375740 DEFB4AO15263 64 aa9.74□□□□□ -0.85
MSH5-202ENST00000375740 CRYGAP11844 174 aa9.74□□□□□ -0.85
MSH5-202ENST00000375740 A0A1B0GX51 115 aa9.73□□□□□ -0.85
MSH5-202ENST00000375740 CIRBPQ14011 172 aaKnown RBP9.73□□□□□ -0.85
MSH5-202ENST00000375740 A0A087WVE0 104 aa9.73□□□□□ -0.85
MSH5-202ENST00000375740 IGKV3D-7A0A0C4DH55 119 aa9.73□□□□□ -0.85
MSH5-202ENST00000375740 OXTP01178 125 aa9.73□□□□□ -0.85
MSH5-202ENST00000375740 HIST1H4AP62805 103 aaKnown RBP9.73□□□□□ -0.85
MSH5-202ENST00000375740 CXCL5P42830 114 aa9.72□□□□□ -0.85
MSH5-202ENST00000375740 APOC4P55056 127 aa9.72□□□□□ -0.85
MSH5-202ENST00000375740 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
MSH5-202ENST00000375740 NBEAL2Q6ZNJ1 2754 aa9.72□□□□□ -0.85
MSH5-202ENST00000375740 LYRM9A8MSI8 78 aa9.71□□□□□ -0.85
MSH5-202ENST00000375740 ATP5G1P05496 136 aa9.71□□□□□ -0.85
MSH5-202ENST00000375740 TRACP01848 142 aa9.71□□□□□ -0.86
MSH5-202ENST00000375740 PRIMA1Q86XR5 153 aa9.71□□□□□ -0.86
MSH5-202ENST00000375740 WFDC9Q8NEX5 89 aa9.71□□□□□ -0.86
MSH5-202ENST00000375740 A0A096LPF7 62 aa9.7□□□□□ -0.86
MSH5-202ENST00000375740 IGHV4-28A0A0C4DH34 117 aa9.7□□□□□ -0.86
MSH5-202ENST00000375740 DSCR8Q96T75 97 aa9.7□□□□□ -0.86
MSH5-202ENST00000375740 PAX4O43316 350 aa9.69□□□□□ -0.86
MSH5-202ENST00000375740 DPH3Q96FX2 82 aa9.69□□□□□ -0.86
MSH5-202ENST00000375740 TEP1Q99973 2627 aaKnown RBP9.69□□□□□ -0.86
MSH5-202ENST00000375740 C14orf132Q9NPU4 83 aa9.69□□□□□ -0.86
MSH5-202ENST00000375740 ATOX1O00244 68 aa9.68□□□□□ -0.86
MSH5-202ENST00000375740 MALP21145 153 aa9.68□□□□□ -0.86
MSH5-202ENST00000375740 ATRQ13535 2644 aa9.68□□□□□ -0.86
MSH5-202ENST00000375740 IGHV3OR16-9A0A0B4J2B5 98 aa9.68□□□□□ -0.86
MSH5-202ENST00000375740 RPS28P62857 69 aaKnown RBP9.68□□□□□ -0.86
MSH5-202ENST00000375740 RPL18AQ02543 176 aaKnown RBP9.67□□□□□ -0.86
MSH5-202ENST00000375740 C4orf26Q17RF5 130 aa9.67□□□□□ -0.86
MSH5-202ENST00000375740 COX7B2Q8TF08 81 aa9.67□□□□□ -0.86
MSH5-202ENST00000375740 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
MSH5-202ENST00000375740 LINC00959A0A1B0GUT2 108 aa9.67□□□□□ -0.86
MSH5-202ENST00000375740 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
MSH5-202ENST00000375740 DAD1P61803 113 aa9.66□□□□□ -0.86
MSH5-202ENST00000375740 Q8NAQ8 132 aa9.66□□□□□ -0.86
MSH5-202ENST00000375740 UPK3BQ9BT76 320 aa9.66□□□□□ -0.86
MSH5-202ENST00000375740 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
MSH5-202ENST00000375740 A0A087WYN8 130 aa9.66□□□□□ -0.86
MSH5-202ENST00000375740 INAFM2P0DMQ5 153 aa9.66□□□□□ -0.86
MSH5-202ENST00000375740 IGHV4-30-4P0DP06 118 aa9.66□□□□□ -0.86
MSH5-202ENST00000375740 WIPF1O43516 503 aa9.65□□□□□ -0.86
MSH5-202ENST00000375740 LINC01561Q8N1V8 128 aa9.65□□□□□ -0.86
MSH5-202ENST00000375740 A0A1B0GUV1 79 aa9.65□□□□□ -0.87
MSH5-202ENST00000375740 MIFP14174 115 aa9.65□□□□□ -0.87
MSH5-202ENST00000375740 OR13C6PQ8NH95 151 aa9.65□□□□□ -0.87
MSH5-202ENST00000375740 A0A087WZ39 114 aa9.64□□□□□ -0.87
MSH5-202ENST00000375740 LINC00337Q8N6G1 96 aa9.64□□□□□ -0.87
MSH5-202ENST00000375740 DNAL4O96015 105 aa9.63□□□□□ -0.87
MSH5-202ENST00000375740 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
MSH5-202ENST00000375740 CLPSL2Q6UWE3 100 aa9.62□□□□□ -0.87
MSH5-202ENST00000375740 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
MSH5-202ENST00000375740 SPART-AS1P0CW21 52 aa9.62□□□□□ -0.87
MSH5-202ENST00000375740 XCL1P47992 114 aa9.62□□□□□ -0.87
MSH5-202ENST00000375740 SS18Q15532 418 aa9.62□□□□□ -0.87
MSH5-202ENST00000375740 SERP2Q8N6R1 65 aa9.62□□□□□ -0.87
MSH5-202ENST00000375740 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
MSH5-202ENST00000375740 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
MSH5-202ENST00000375740 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
MSH5-202ENST00000375740 NCR3O14931 201 aa9.61□□□□□ -0.87
MSH5-202ENST00000375740 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
MSH5-202ENST00000375740 SLPIP03973 132 aa9.6□□□□□ -0.87
MSH5-202ENST00000375740 HTN3P15516 51 aa9.6□□□□□ -0.87
MSH5-202ENST00000375740 Q5XG85 94 aa9.6□□□□□ -0.87
MSH5-202ENST00000375740 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
MSH5-202ENST00000375740 TMEM258P61165 79 aa9.6□□□□□ -0.87
MSH5-202ENST00000375740 TRRAPQ9Y4A5 3859 aa9.59□□□□□ -0.87
MSH5-202ENST00000375740 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
MSH5-202ENST00000375740 SMIM11BQ8TCY0 68 aa9.59□□□□□ -0.87
MSH5-202ENST00000375740 LINC00158P58513 81 aa9.59□□□□□ -0.88
MSH5-202ENST00000375740 LINC00269Q8N2A0 174 aa9.59□□□□□ -0.88
MSH5-202ENST00000375740 Q8N3U1 123 aa9.59□□□□□ -0.88
MSH5-202ENST00000375740 KRTAP10-11P60412 298 aa9.58□□□□□ -0.88
MSH5-202ENST00000375740 Q6JHZ5 121 aa9.58□□□□□ -0.88
MSH5-202ENST00000375740 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
MSH5-202ENST00000375740 CRPP02741 224 aa9.57□□□□□ -0.88
MSH5-202ENST00000375740 KRTAP24-1Q3LI83 254 aa9.57□□□□□ -0.88
MSH5-202ENST00000375740 C11orf68Q9H3H3 251 aaKnown RBP9.57□□□□□ -0.88
MSH5-202ENST00000375740 F8P00451 2351 aa9.57□□□□□ -0.88
MSH5-202ENST00000375740 LECT2O14960 151 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms