RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 TRAV13-1A0A0B4J241 112 aa9.84□□□□□ -0.83
SMPDL3B-201ENST00000373888 IGKV3OR2-268A0A0C4DH90 116 aa9.84□□□□□ -0.83
SMPDL3B-201ENST00000373888 LINC00959A0A1B0GUT2 108 aa9.84□□□□□ -0.83
SMPDL3B-201ENST00000373888 K7EP34 96 aa9.84□□□□□ -0.83
SMPDL3B-201ENST00000373888 SRSF9Q13242 221 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMPDL3B-201ENST00000373888 MIAQ16674 131 aa9.84□□□□□ -0.83
SMPDL3B-201ENST00000373888 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
SMPDL3B-201ENST00000373888 ALMS1Q8TCU4 4167 aa9.84□□□□□ -0.83
SMPDL3B-201ENST00000373888 FXYD2P54710 66 aa9.83□□□□□ -0.84
SMPDL3B-201ENST00000373888 TRAV8-3A0A0A6YYJ7 113 aa9.82□□□□□ -0.84
SMPDL3B-201ENST00000373888 TRAV8-4A0A0B4J246 113 aa9.82□□□□□ -0.84
SMPDL3B-201ENST00000373888 SS18Q15532 418 aa9.82□□□□□ -0.84
SMPDL3B-201ENST00000373888 ANAPC13Q9BS18 74 aa9.82□□□□□ -0.84
SMPDL3B-201ENST00000373888 CDKN2A-AS1Q9UH64 79 aa9.82□□□□□ -0.84
SMPDL3B-201ENST00000373888 C9orf118A6NHY6 69 aa9.82□□□□□ -0.84
SMPDL3B-201ENST00000373888 IGHV3-64A0A075B6Q5 118 aa9.81□□□□□ -0.84
SMPDL3B-201ENST00000373888 SPINK8P0C7L1 97 aa9.81□□□□□ -0.84
SMPDL3B-201ENST00000373888 Q6ZR54 194 aa9.81□□□□□ -0.84
SMPDL3B-201ENST00000373888 IGLV10-54A0A075B6I4 117 aa9.8□□□□□ -0.84
SMPDL3B-201ENST00000373888 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
SMPDL3B-201ENST00000373888 A0A1B0GWB2 263 aa9.8□□□□□ -0.84
SMPDL3B-201ENST00000373888 B5MCH6 92 aa9.8□□□□□ -0.84
SMPDL3B-201ENST00000373888 Q6ZVH6 145 aa9.8□□□□□ -0.84
SMPDL3B-201ENST00000373888 CHCHD10Q8WYQ3 142 aaPredicted RBP9.8□□□□□ -0.84
SMPDL3B-201ENST00000373888 NHP2Q9NX24 153 aaKnown RBP9.8□□□□□ -0.84
SMPDL3B-201ENST00000373888 NDUFA12Q9UI09 145 aa9.8□□□□□ -0.84
SMPDL3B-201ENST00000373888 COX6A2Q02221 97 aa9.79□□□□□ -0.84
SMPDL3B-201ENST00000373888 Q9HAA7 133 aa9.79□□□□□ -0.84
SMPDL3B-201ENST00000373888 A0A0J9YXY3 114 aa9.78□□□□□ -0.84
SMPDL3B-201ENST00000373888 LCE6AA0A183 80 aa9.78□□□□□ -0.84
SMPDL3B-201ENST00000373888 NDUFA1O15239 70 aa9.78□□□□□ -0.84
SMPDL3B-201ENST00000373888 TIMM17BO60830 172 aa9.78□□□□□ -0.84
SMPDL3B-201ENST00000373888 XCL1P47992 114 aa9.78□□□□□ -0.84
SMPDL3B-201ENST00000373888 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
SMPDL3B-201ENST00000373888 RMI2Q96E14 147 aa9.78□□□□□ -0.84
SMPDL3B-201ENST00000373888 C1orf43Q9BWL3 253 aa9.78□□□□□ -0.84
SMPDL3B-201ENST00000373888 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.84
SMPDL3B-201ENST00000373888 M0R2N4 97 aa9.77□□□□□ -0.84
SMPDL3B-201ENST00000373888 KRTAP26-1Q6PEX3 210 aa9.77□□□□□ -0.84
SMPDL3B-201ENST00000373888 IGKV2D-24A0A075B6R9 120 aa9.77□□□□□ -0.85
SMPDL3B-201ENST00000373888 SMIM1B2RUZ4 78 aa9.77□□□□□ -0.85
SMPDL3B-201ENST00000373888 FOXI1Q12951 378 aa9.77□□□□□ -0.85
SMPDL3B-201ENST00000373888 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.85
SMPDL3B-201ENST00000373888 KMT2AQ03164 3969 aa9.76□□□□□ -0.85
SMPDL3B-201ENST00000373888 CIRBPQ14011 172 aaKnown RBP9.75□□□□□ -0.85
SMPDL3B-201ENST00000373888 RAB37Q96AX2 223 aa9.75□□□□□ -0.85
SMPDL3B-201ENST00000373888 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
SMPDL3B-201ENST00000373888 H3BUT2 72 aa9.74□□□□□ -0.85
SMPDL3B-201ENST00000373888 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
SMPDL3B-201ENST00000373888 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
SMPDL3B-201ENST00000373888 DNAH6Q9C0G6 4158 aa9.73□□□□□ -0.85
SMPDL3B-201ENST00000373888 A0A087WZ39 114 aa9.73□□□□□ -0.85
SMPDL3B-201ENST00000373888 COPS9Q8WXC6 57 aa9.73□□□□□ -0.85
SMPDL3B-201ENST00000373888 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 A0A1W2PPM0 123 aa9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 COX7A2LO14548 114 aa9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 FABP2P12104 132 aa9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 IFITM1P13164 125 aa9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 Q6ZRN7 208 aaPredicted RBP9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 K7ERJ3 54 aa9.72□□□□□ -0.85
SMPDL3B-201ENST00000373888 F8W1H4 67 aa9.71□□□□□ -0.86
SMPDL3B-201ENST00000373888 SEC61GP60059 68 aa9.71□□□□□ -0.86
SMPDL3B-201ENST00000373888 LITAFQ99732 161 aa9.71□□□□□ -0.86
SMPDL3B-201ENST00000373888 C1orf134Q5TEV5 83 aa9.7□□□□□ -0.86
SMPDL3B-201ENST00000373888 COX7B2Q8TF08 81 aa9.7□□□□□ -0.86
SMPDL3B-201ENST00000373888 ZNF625Q96I27 306 aaPredicted RBP9.7□□□□□ -0.86
SMPDL3B-201ENST00000373888 SACSQ9NZJ4 4579 aa9.7□□□□□ -0.86
SMPDL3B-201ENST00000373888 A0A0B4J2C4 111 aa9.69□□□□□ -0.86
SMPDL3B-201ENST00000373888 MALP21145 153 aa9.69□□□□□ -0.86
SMPDL3B-201ENST00000373888 LYRM7Q5U5X0 104 aa9.69□□□□□ -0.86
SMPDL3B-201ENST00000373888 PSCAO43653 123 aa9.68□□□□□ -0.86
SMPDL3B-201ENST00000373888 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
SMPDL3B-201ENST00000373888 A0A1B0GX51 115 aa9.67□□□□□ -0.86
SMPDL3B-201ENST00000373888 APOMO95445 188 aa9.67□□□□□ -0.86
SMPDL3B-201ENST00000373888 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
SMPDL3B-201ENST00000373888 PRSS2P07478 247 aa9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 CFC1BP0CG36 223 aa9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 CFC1P0CG37 223 aa9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 C15orf56Q8N910 161 aa9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 PRO1854Q9UHT4 67 aa9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 KMT2CQ8NEZ4 4911 aaKnown RBP9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 RPS28P62857 69 aaKnown RBP9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 MEIG1Q5JSS6 88 aa9.66□□□□□ -0.86
SMPDL3B-201ENST00000373888 DNAH10Q8IVF4 4471 aa9.65□□□□□ -0.86
SMPDL3B-201ENST00000373888 J3KT08 172 aa9.65□□□□□ -0.86
SMPDL3B-201ENST00000373888 ADAMTSL4-AS1Q5T5F5 129 aa9.65□□□□□ -0.86
SMPDL3B-201ENST00000373888 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
SMPDL3B-201ENST00000373888 Q8IZM0 81 aa9.64□□□□□ -0.87
SMPDL3B-201ENST00000373888 NAA38Q9BRA0 125 aaKnown RBP9.64□□□□□ -0.87
SMPDL3B-201ENST00000373888 TOMM7Q9P0U1 55 aa9.64□□□□□ -0.87
SMPDL3B-201ENST00000373888 GVQW2A0A096LPI5 108 aaPredicted RBP9.63□□□□□ -0.87
SMPDL3B-201ENST00000373888 LRCOL1A6NCL2 159 aa9.63□□□□□ -0.87
SMPDL3B-201ENST00000373888 Q6Q795 121 aa9.63□□□□□ -0.87
SMPDL3B-201ENST00000373888 RTL8CO15255 209 aa9.62□□□□□ -0.87
SMPDL3B-201ENST00000373888 CXCL5P42830 114 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms