RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
LDB3-204ENST00000372066 PLECQ15149 4684 aaKnown RBP9.75□□□□□ -0.85
LDB3-204ENST00000372066 TRBV30A0A0K0K1B3 111 aa9.75□□□□□ -0.85
LDB3-204ENST00000372066 EIF4EBP3O60516 100 aaPredicted RBP9.75□□□□□ -0.85
LDB3-204ENST00000372066 PSMB2P49721 201 aa9.75□□□□□ -0.85
LDB3-204ENST00000372066 IGHV3OR16-9A0A0B4J2B5 98 aa9.74□□□□□ -0.85
LDB3-204ENST00000372066 SCGB1C2P0DMR2 95 aa9.74□□□□□ -0.85
LDB3-204ENST00000372066 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
LDB3-204ENST00000372066 A0A087WZ39 114 aa9.73□□□□□ -0.85
LDB3-204ENST00000372066 SS18Q15532 418 aa9.73□□□□□ -0.85
LDB3-204ENST00000372066 Q1RN00 199 aa9.73□□□□□ -0.85
LDB3-204ENST00000372066 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
LDB3-204ENST00000372066 LINC00959A0A1B0GUT2 108 aa9.72□□□□□ -0.85
LDB3-204ENST00000372066 WFDC2Q14508 124 aa9.72□□□□□ -0.85
LDB3-204ENST00000372066 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
LDB3-204ENST00000372066 M0QXV9 152 aa9.71□□□□□ -0.85
LDB3-204ENST00000372066 TCL1BO95988 128 aa9.71□□□□□ -0.85
LDB3-204ENST00000372066 COX6CP09669 75 aa9.71□□□□□ -0.86
LDB3-204ENST00000372066 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.86
LDB3-204ENST00000372066 TMEM262E9PQX1 116 aa9.7□□□□□ -0.86
LDB3-204ENST00000372066 ALMS1Q8TCU4 4167 aa9.69□□□□□ -0.86
LDB3-204ENST00000372066 LY6G6CO95867 125 aa9.69□□□□□ -0.86
LDB3-204ENST00000372066 ATXN8Q156A1 80 aa9.69□□□□□ -0.86
LDB3-204ENST00000372066 CELA1Q9UNI1 258 aa9.69□□□□□ -0.86
LDB3-204ENST00000372066 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
LDB3-204ENST00000372066 IGKV3OR2-268A0A0C4DH90 116 aa9.68□□□□□ -0.86
LDB3-204ENST00000372066 DEFB4AO15263 64 aa9.68□□□□□ -0.86
LDB3-204ENST00000372066 H7C2G1 150 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 TRIAP1O43715 76 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 ETDBQ3ZM63 59 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 LINC00476Q8WZB0 136 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 IBA57-AS1B1ANH7 110 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 RPL13AP40429 203 aaKnown RBP9.67□□□□□ -0.86
LDB3-204ENST00000372066 NPC2P61916 151 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 LELP1Q5T871 98 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 LINC01600Q96MT4 127 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
LDB3-204ENST00000372066 SMCPP49901 116 aaPredicted RBP9.66□□□□□ -0.86
LDB3-204ENST00000372066 Q8IZM0 81 aa9.66□□□□□ -0.86
LDB3-204ENST00000372066 DAND5Q8N907 189 aa9.66□□□□□ -0.86
LDB3-204ENST00000372066 TOMM7Q9P0U1 55 aa9.66□□□□□ -0.86
LDB3-204ENST00000372066 A0A0J9YWU9 116 aa9.65□□□□□ -0.86
LDB3-204ENST00000372066 H3BNG1 76 aa9.65□□□□□ -0.86
LDB3-204ENST00000372066 TEN1Q86WV5 123 aa9.65□□□□□ -0.86
LDB3-204ENST00000372066 A0A096LPF7 62 aa9.64□□□□□ -0.87
LDB3-204ENST00000372066 GAGE12HA6NDE8 117 aa9.64□□□□□ -0.87
LDB3-204ENST00000372066 NUPR2A6NF83 97 aa9.64□□□□□ -0.87
LDB3-204ENST00000372066 CXCL5P42830 114 aa9.64□□□□□ -0.87
LDB3-204ENST00000372066 SOSTDC1Q6X4U4 206 aa9.64□□□□□ -0.87
LDB3-204ENST00000372066 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
LDB3-204ENST00000372066 MTURNQ8N3F0 131 aa9.64□□□□□ -0.87
LDB3-204ENST00000372066 C11orf68Q9H3H3 251 aaKnown RBP9.64□□□□□ -0.87
LDB3-204ENST00000372066 LINC01620Q4KN68 170 aa9.63□□□□□ -0.87
LDB3-204ENST00000372066 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
LDB3-204ENST00000372066 PPDPFLQ8WWR9 84 aa9.63□□□□□ -0.87
LDB3-204ENST00000372066 TRAV13-2A0A0B4J235 113 aa9.63□□□□□ -0.87
LDB3-204ENST00000372066 SLC25A20O43772 301 aa9.63□□□□□ -0.87
LDB3-204ENST00000372066 XCL1P47992 114 aa9.63□□□□□ -0.87
LDB3-204ENST00000372066 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
LDB3-204ENST00000372066 C9JAW5 83 aa9.62□□□□□ -0.87
LDB3-204ENST00000372066 ANGP03950 147 aaKnown RBP9.62□□□□□ -0.87
LDB3-204ENST00000372066 FOXI1Q12951 378 aa9.62□□□□□ -0.87
LDB3-204ENST00000372066 C6orf226Q5I0X4 101 aa9.62□□□□□ -0.87
LDB3-204ENST00000372066 KLK5Q9Y337 293 aaPredicted RBP9.62□□□□□ -0.87
LDB3-204ENST00000372066 COX7A2LO14548 114 aa9.61□□□□□ -0.87
LDB3-204ENST00000372066 HTN3P15516 51 aa9.61□□□□□ -0.87
LDB3-204ENST00000372066 LINC00158P58513 81 aa9.61□□□□□ -0.87
LDB3-204ENST00000372066 REG3AQ06141 175 aa9.61□□□□□ -0.87
LDB3-204ENST00000372066 LINC00269Q8N2A0 174 aa9.61□□□□□ -0.87
LDB3-204ENST00000372066 MIR7-3HGQ8N6C7 128 aa9.61□□□□□ -0.87
LDB3-204ENST00000372066 TRBV10-2A0A0K0K1G8 114 aa9.6□□□□□ -0.87
LDB3-204ENST00000372066 H3BT86 120 aa9.6□□□□□ -0.87
LDB3-204ENST00000372066 LST1O00453 97 aa9.6□□□□□ -0.87
LDB3-204ENST00000372066 CRPP02741 224 aa9.59□□□□□ -0.87
LDB3-204ENST00000372066 ANKRD29Q8N6D5 301 aa9.59□□□□□ -0.87
LDB3-204ENST00000372066 CHCHD10Q8WYQ3 142 aaPredicted RBP9.59□□□□□ -0.87
LDB3-204ENST00000372066 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
LDB3-204ENST00000372066 COX17Q14061 63 aa9.58□□□□□ -0.88
LDB3-204ENST00000372066 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
LDB3-204ENST00000372066 CKS1BP61024 79 aa9.57□□□□□ -0.88
LDB3-204ENST00000372066 CFAP161Q6P656 301 aa9.57□□□□□ -0.88
LDB3-204ENST00000372066 KRTAP17-1Q9BYP8 105 aa9.57□□□□□ -0.88
LDB3-204ENST00000372066 PRR34Q9NV39 138 aa9.57□□□□□ -0.88
LDB3-204ENST00000372066 MALP21145 153 aa9.55□□□□□ -0.88
LDB3-204ENST00000372066 RPL28P46779 137 aaKnown RBP9.55□□□□□ -0.88
LDB3-204ENST00000372066 LYPD5Q6UWN5 251 aa9.55□□□□□ -0.88
LDB3-204ENST00000372066 CARD19Q96LW7 228 aa9.55□□□□□ -0.88
LDB3-204ENST00000372066 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
LDB3-204ENST00000372066 CCL18P55774 89 aa9.54□□□□□ -0.88
LDB3-204ENST00000372066 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
LDB3-204ENST00000372066 A0A1B0GV72 72 aa9.54□□□□□ -0.88
LDB3-204ENST00000372066 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
LDB3-204ENST00000372066 KMT2AQ03164 3969 aa9.53□□□□□ -0.88
LDB3-204ENST00000372066 TRACP01848 142 aa9.53□□□□□ -0.88
LDB3-204ENST00000372066 PFN2P35080 140 aa9.53□□□□□ -0.88
LDB3-204ENST00000372066 C2orf82Q6UX34 121 aa9.53□□□□□ -0.88
LDB3-204ENST00000372066 FRAS1Q86XX4 4008 aa9.52□□□□□ -0.89
LDB3-204ENST00000372066 NANOS2P60321 138 aaKnown RBP9.52□□□□□ -0.89
LDB3-204ENST00000372066 C11orf45Q8TAV5 145 aa9.52□□□□□ -0.89
LDB3-204ENST00000372066 IGKV2-28A0A075B6P5 120 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms