RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 TAX1BP3O14907 124 aa11.26□□□□□ -0.61
PHGDH-202ENST00000369409 KRTAP26-1Q6PEX3 210 aa11.26□□□□□ -0.61
PHGDH-202ENST00000369409 IGKV2D-24A0A075B6R9 120 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 APOMO95445 188 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 CIRBPQ14011 172 aaKnown RBP11.25□□□□□ -0.61
PHGDH-202ENST00000369409 CFAP161Q6P656 301 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 TMEM238LA0A1B0GVL6 79 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 A6NJY4 79 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 NPC2P61916 151 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 UBE2V1Q13404 147 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 MUSTN1Q8IVN3 82 aa11.25□□□□□ -0.61
PHGDH-202ENST00000369409 IBA57-AS1B1ANH7 110 aa11.24□□□□□ -0.61
PHGDH-202ENST00000369409 SMIM13P0DJ93 91 aa11.24□□□□□ -0.61
PHGDH-202ENST00000369409 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
PHGDH-202ENST00000369409 PLECQ15149 4684 aaKnown RBP11.24□□□□□ -0.61
PHGDH-202ENST00000369409 CKS1BP61024 79 aa11.23□□□□□ -0.61
PHGDH-202ENST00000369409 SFTA2Q6UW10 78 aa11.23□□□□□ -0.61
PHGDH-202ENST00000369409 RAB37Q96AX2 223 aa11.23□□□□□ -0.61
PHGDH-202ENST00000369409 DNAH1Q9P2D7 4330 aa11.23□□□□□ -0.61
PHGDH-202ENST00000369409 STARD9Q9P2P6 4700 aa11.23□□□□□ -0.61
PHGDH-202ENST00000369409 A4D1N5 150 aa11.21□□□□□ -0.61
PHGDH-202ENST00000369409 CXCL5P42830 114 aa11.21□□□□□ -0.61
PHGDH-202ENST00000369409 RPL24P83731 157 aaKnown RBP11.21□□□□□ -0.61
PHGDH-202ENST00000369409 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.61
PHGDH-202ENST00000369409 A0A1B0GWB2 263 aa11.21□□□□□ -0.62
PHGDH-202ENST00000369409 COX11Q9Y6N1 276 aa11.21□□□□□ -0.62
PHGDH-202ENST00000369409 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-202ENST00000369409 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
PHGDH-202ENST00000369409 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
PHGDH-202ENST00000369409 IFITM1P13164 125 aa11.19□□□□□ -0.62
PHGDH-202ENST00000369409 PFN2P35080 140 aa11.19□□□□□ -0.62
PHGDH-202ENST00000369409 LINC00158P58513 81 aa11.19□□□□□ -0.62
PHGDH-202ENST00000369409 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
PHGDH-202ENST00000369409 LINC00308Q8TCZ7 52 aa11.19□□□□□ -0.62
PHGDH-202ENST00000369409 NAA38Q9BRA0 125 aaKnown RBP11.19□□□□□ -0.62
PHGDH-202ENST00000369409 TENM2Q9NT68 2774 aa11.18□□□□□ -0.62
PHGDH-202ENST00000369409 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
PHGDH-202ENST00000369409 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
PHGDH-202ENST00000369409 KRTAP1-5Q9BYS1 174 aa11.18□□□□□ -0.62
PHGDH-202ENST00000369409 CFC1BP0CG36 223 aa11.17□□□□□ -0.62
PHGDH-202ENST00000369409 CFC1P0CG37 223 aa11.17□□□□□ -0.62
PHGDH-202ENST00000369409 SOSTDC1Q6X4U4 206 aa11.17□□□□□ -0.62
PHGDH-202ENST00000369409 C9orf118A6NHY6 69 aa11.16□□□□□ -0.62
PHGDH-202ENST00000369409 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
PHGDH-202ENST00000369409 UNQ6190/PRO20217Q6UXQ8 127 aa11.16□□□□□ -0.62
PHGDH-202ENST00000369409 RMI2Q96E14 147 aa11.16□□□□□ -0.62
PHGDH-202ENST00000369409 H3BUT2 72 aa11.15□□□□□ -0.62
PHGDH-202ENST00000369409 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.15□□□□□ -0.63
PHGDH-202ENST00000369409 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.63
PHGDH-202ENST00000369409 C9orf116Q5BN46 136 aaPredicted RBP11.15□□□□□ -0.63
PHGDH-202ENST00000369409 NTN5Q8WTR8 489 aaPredicted RBP11.15□□□□□ -0.63
PHGDH-202ENST00000369409 COPS9Q8WXC6 57 aa11.15□□□□□ -0.63
PHGDH-202ENST00000369409 CASC10Q5T4H9 136 aa11.14□□□□□ -0.63
PHGDH-202ENST00000369409 A0A0B4J2C4 111 aa11.13□□□□□ -0.63
PHGDH-202ENST00000369409 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
PHGDH-202ENST00000369409 VPS25Q9BRG1 176 aa11.13□□□□□ -0.63
PHGDH-202ENST00000369409 TGP01266 2768 aa11.13□□□□□ -0.63
PHGDH-202ENST00000369409 PGPEP1Q9NXJ5 209 aa11.12□□□□□ -0.63
PHGDH-202ENST00000369409 GVQW2A0A096LPI5 108 aaPredicted RBP11.12□□□□□ -0.63
PHGDH-202ENST00000369409 CAMK2N2Q96S95 79 aa11.12□□□□□ -0.63
PHGDH-202ENST00000369409 K7ERU9 68 aa11.11□□□□□ -0.63
PHGDH-202ENST00000369409 PRO1854Q9UHT4 67 aa11.11□□□□□ -0.63
PHGDH-202ENST00000369409 VPS13DQ5THJ4 4388 aa11.11□□□□□ -0.63
PHGDH-202ENST00000369409 COX17Q14061 63 aa11.1□□□□□ -0.63
PHGDH-202ENST00000369409 C6orf48Q9UBA6 75 aa11.1□□□□□ -0.63
PHGDH-202ENST00000369409 TSPAN13O95857 204 aa11.1□□□□□ -0.63
PHGDH-202ENST00000369409 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
PHGDH-202ENST00000369409 PPDPFQ9H3Y8 114 aa11.1□□□□□ -0.63
PHGDH-202ENST00000369409 USP17L23D6RBM5 183 aa11.09□□□□□ -0.63
PHGDH-202ENST00000369409 VAMP3Q15836 100 aa11.09□□□□□ -0.63
PHGDH-202ENST00000369409 A0A1W2PPM0 123 aa11.08□□□□□ -0.64
PHGDH-202ENST00000369409 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
PHGDH-202ENST00000369409 Q6ZRU5 148 aa11.08□□□□□ -0.64
PHGDH-202ENST00000369409 SVIPQ8NHG7 77 aa11.08□□□□□ -0.64
PHGDH-202ENST00000369409 C2orf48Q96LS8 159 aa11.08□□□□□ -0.64
PHGDH-202ENST00000369409 NBDYA0A0U1RRE5 68 aa11.08□□□□□ -0.64
PHGDH-202ENST00000369409 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.64
PHGDH-202ENST00000369409 H7C2G1 150 aa11.07□□□□□ -0.64
PHGDH-202ENST00000369409 LECT2O14960 151 aa11.07□□□□□ -0.64
PHGDH-202ENST00000369409 WWC2-AS2Q96NR7 200 aa11.07□□□□□ -0.64
PHGDH-202ENST00000369409 DNAH10Q8IVF4 4471 aa11.07□□□□□ -0.64
PHGDH-202ENST00000369409 TRBV30A0A0K0K1B3 111 aa11.06□□□□□ -0.64
PHGDH-202ENST00000369409 OCIAD2Q56VL3 154 aa11.06□□□□□ -0.64
PHGDH-202ENST00000369409 FABP2P12104 132 aa11.05□□□□□ -0.64
PHGDH-202ENST00000369409 RPL13AP40429 203 aaKnown RBP11.04□□□□□ -0.64
PHGDH-202ENST00000369409 Q1RN00 199 aa11.04□□□□□ -0.64
PHGDH-202ENST00000369409 F8WDY8 70 aa11.04□□□□□ -0.64
PHGDH-202ENST00000369409 PSCAO43653 123 aa11.04□□□□□ -0.64
PHGDH-202ENST00000369409 SYCNQ0VAF6 134 aa11.04□□□□□ -0.64
PHGDH-202ENST00000369409 WFDC2Q14508 124 aa11.02□□□□□ -0.64
PHGDH-202ENST00000369409 IGKV2-28A0A075B6P5 120 aa11.02□□□□□ -0.65
PHGDH-202ENST00000369409 LOC107984156A0A0G2JMH3 177 aa11.02□□□□□ -0.65
PHGDH-202ENST00000369409 IGKV2D-28P01615 120 aa11.02□□□□□ -0.65
PHGDH-202ENST00000369409 ARL17AQ8IVW1 177 aa11.02□□□□□ -0.65
PHGDH-202ENST00000369409 CARD19Q96LW7 228 aa11.02□□□□□ -0.65
PHGDH-202ENST00000369409 SPCS1Q9Y6A9 102 aa11.02□□□□□ -0.65
PHGDH-202ENST00000369409 M0R2N4 97 aa11.01□□□□□ -0.65
PHGDH-202ENST00000369409 K7EP34 96 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms