RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 K7ERJ3 54 aa9.47□□□□□ -0.89
HMGCS2-201ENST00000369406 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
HMGCS2-201ENST00000369406 LINC01556Q5JQF7 62 aa9.47□□□□□ -0.89
HMGCS2-201ENST00000369406 COX7B2Q8TF08 81 aa9.47□□□□□ -0.89
HMGCS2-201ENST00000369406 TM2D2Q9BX73 214 aa9.47□□□□□ -0.89
HMGCS2-201ENST00000369406 APLNQ9ULZ1 77 aa9.47□□□□□ -0.89
HMGCS2-201ENST00000369406 DAND5Q8N907 189 aa9.46□□□□□ -0.89
HMGCS2-201ENST00000369406 DNAH10OSP0CZ25 163 aa9.46□□□□□ -0.9
HMGCS2-201ENST00000369406 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
HMGCS2-201ENST00000369406 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
HMGCS2-201ENST00000369406 COX7A2LO14548 114 aa9.44□□□□□ -0.9
HMGCS2-201ENST00000369406 KIAA0087Q14695 138 aa9.44□□□□□ -0.9
HMGCS2-201ENST00000369406 TAL2Q16559 108 aa9.44□□□□□ -0.9
HMGCS2-201ENST00000369406 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
HMGCS2-201ENST00000369406 SRSF9Q13242 221 aaKnown RBP eCLIP9.44□□□□□ -0.9
HMGCS2-201ENST00000369406 LINC00526Q96FQ7 95 aa9.44□□□□□ -0.9
HMGCS2-201ENST00000369406 CRPP02741 224 aa9.43□□□□□ -0.9
HMGCS2-201ENST00000369406 NPC2P61916 151 aa9.43□□□□□ -0.9
HMGCS2-201ENST00000369406 CCL18P55774 89 aa9.43□□□□□ -0.9
HMGCS2-201ENST00000369406 KMT2AQ03164 3969 aa9.42□□□□□ -0.9
HMGCS2-201ENST00000369406 SMIM13P0DJ93 91 aa9.42□□□□□ -0.9
HMGCS2-201ENST00000369406 KRTAP1-5Q9BYS1 174 aa9.42□□□□□ -0.9
HMGCS2-201ENST00000369406 NHP2Q9NX24 153 aaKnown RBP9.42□□□□□ -0.9
HMGCS2-201ENST00000369406 WFDC2Q14508 124 aa9.42□□□□□ -0.9
HMGCS2-201ENST00000369406 CFAP161Q6P656 301 aa9.42□□□□□ -0.9
HMGCS2-201ENST00000369406 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
HMGCS2-201ENST00000369406 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
HMGCS2-201ENST00000369406 MIAQ16674 131 aa9.41□□□□□ -0.9
HMGCS2-201ENST00000369406 UPK3BQ9BT76 320 aa9.41□□□□□ -0.9
HMGCS2-201ENST00000369406 J3QR89 54 aa9.41□□□□□ -0.9
HMGCS2-201ENST00000369406 Q9HAA7 133 aa9.41□□□□□ -0.9
HMGCS2-201ENST00000369406 LINC01561Q8N1V8 128 aa9.4□□□□□ -0.9
HMGCS2-201ENST00000369406 CASC10Q5T4H9 136 aa9.4□□□□□ -0.91
HMGCS2-201ENST00000369406 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.91
HMGCS2-201ENST00000369406 Q8IZM0 81 aa9.4□□□□□ -0.91
HMGCS2-201ENST00000369406 DNAH2Q9P225 4427 aa9.39□□□□□ -0.91
HMGCS2-201ENST00000369406 TRAV8-4A0A0B4J246 113 aa9.39□□□□□ -0.91
HMGCS2-201ENST00000369406 MALP21145 153 aa9.39□□□□□ -0.91
HMGCS2-201ENST00000369406 SPANXDQ9BXN6 97 aa9.39□□□□□ -0.91
HMGCS2-201ENST00000369406 SPANXCQ9NY87 97 aa9.39□□□□□ -0.91
HMGCS2-201ENST00000369406 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
HMGCS2-201ENST00000369406 TIMM17BO60830 172 aa9.38□□□□□ -0.91
HMGCS2-201ENST00000369406 ETDBQ3ZM63 59 aa9.38□□□□□ -0.91
HMGCS2-201ENST00000369406 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
HMGCS2-201ENST00000369406 A0A1B0GWB2 263 aa9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 A4D1N5 150 aa9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 MEIG1Q5JSS6 88 aa9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 IGKV2D-24A0A075B6R9 120 aa9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 F8W1H4 67 aa9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 PRSS2P07478 247 aa9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
HMGCS2-201ENST00000369406 NUPR2A6NF83 97 aa9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 CFC1BP0CG36 223 aa9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 CFC1P0CG37 223 aa9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 MTURNQ8N3F0 131 aa9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 KLK5Q9Y337 293 aaPredicted RBP9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 A6NJY4 79 aa9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 HERV-K104P63124 156 aa9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 SPAG11BQ08648 103 aa9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 HIGD2BQ4VC39 106 aa9.36□□□□□ -0.91
HMGCS2-201ENST00000369406 UNQ6190/PRO20217Q6UXQ8 127 aa9.35□□□□□ -0.91
HMGCS2-201ENST00000369406 C1orf43Q9BWL3 253 aa9.35□□□□□ -0.91
HMGCS2-201ENST00000369406 H3BMG7 143 aa9.35□□□□□ -0.91
HMGCS2-201ENST00000369406 APOMO95445 188 aa9.35□□□□□ -0.91
HMGCS2-201ENST00000369406 PFN2P35080 140 aa9.35□□□□□ -0.91
HMGCS2-201ENST00000369406 LINC00308Q8TCZ7 52 aa9.35□□□□□ -0.91
HMGCS2-201ENST00000369406 TSPAN13O95857 204 aa9.34□□□□□ -0.91
HMGCS2-201ENST00000369406 MIR7-3HGQ8N6C7 128 aa9.34□□□□□ -0.91
HMGCS2-201ENST00000369406 UBE2DNLQ8IWF7 75 aa9.33□□□□□ -0.92
HMGCS2-201ENST00000369406 ERG28Q9UKR5 140 aa9.33□□□□□ -0.92
HMGCS2-201ENST00000369406 SS18L2Q9UHA2 77 aa9.33□□□□□ -0.92
HMGCS2-201ENST00000369406 LINC00158P58513 81 aa9.32□□□□□ -0.92
HMGCS2-201ENST00000369406 NTN5Q8WTR8 489 aaPredicted RBP9.32□□□□□ -0.92
HMGCS2-201ENST00000369406 DNAH6Q9C0G6 4158 aa9.31□□□□□ -0.92
HMGCS2-201ENST00000369406 CIRBPQ14011 172 aaKnown RBP9.31□□□□□ -0.92
HMGCS2-201ENST00000369406 PRO0461Q9UI25 63 aa9.31□□□□□ -0.92
HMGCS2-201ENST00000369406 HYDINQ4G0P3 5121 aa9.3□□□□□ -0.92
HMGCS2-201ENST00000369406 CDIP1Q9H305 208 aa9.3□□□□□ -0.92
HMGCS2-201ENST00000369406 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
HMGCS2-201ENST00000369406 ALMS1Q8TCU4 4167 aa9.3□□□□□ -0.92
HMGCS2-201ENST00000369406 MT-ATP8P03928 68 aa9.3□□□□□ -0.92
HMGCS2-201ENST00000369406 PGPEP1Q9NXJ5 209 aa9.29□□□□□ -0.92
HMGCS2-201ENST00000369406 LECT2O14960 151 aa9.29□□□□□ -0.92
HMGCS2-201ENST00000369406 IFITM1P13164 125 aa9.29□□□□□ -0.92
HMGCS2-201ENST00000369406 SFTA2Q6UW10 78 aa9.29□□□□□ -0.92
HMGCS2-201ENST00000369406 CXCL5P42830 114 aa9.28□□□□□ -0.92
HMGCS2-201ENST00000369406 Q8NDZ9 215 aa9.28□□□□□ -0.92
HMGCS2-201ENST00000369406 GVQW2A0A096LPI5 108 aaPredicted RBP9.27□□□□□ -0.93
HMGCS2-201ENST00000369406 SLPIP03973 132 aa9.27□□□□□ -0.93
HMGCS2-201ENST00000369406 Q6ZRU5 148 aa9.27□□□□□ -0.93
HMGCS2-201ENST00000369406 HECTD4Q9Y4D8 3996 aa9.27□□□□□ -0.93
HMGCS2-201ENST00000369406 A0A0B4J2C4 111 aa9.26□□□□□ -0.93
HMGCS2-201ENST00000369406 USP17L23D6RBM5 183 aa9.26□□□□□ -0.93
HMGCS2-201ENST00000369406 H7C2G1 150 aa9.26□□□□□ -0.93
HMGCS2-201ENST00000369406 XGP55808 180 aa9.26□□□□□ -0.93
HMGCS2-201ENST00000369406 MUC7Q8TAX7 377 aa9.26□□□□□ -0.93
HMGCS2-201ENST00000369406 IGKV2-28A0A075B6P5 120 aa9.25□□□□□ -0.93
HMGCS2-201ENST00000369406 ZNF561-AS1K7EIQ3 104 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms