RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
CLRN3-201ENST00000368671 TRBV30A0A0K0K1B3 111 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 LOC389332A0A1B0GUA5 103 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 NDUFC2-KCTD14E9PQ53 114 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 PRR4Q16378 134 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 C9orf129Q5T035 196 aaKnown RBP6.21□□□□□ -1.42
CLRN3-201ENST00000368671 TEX43Q6ZNM6 134 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 TMEM136Q6ZRR5 245 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 TMEM141Q96I45 108 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 PRELID3AQ96N28 172 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
CLRN3-201ENST00000368671 ZC2HC1BQ5TFG8 222 aa6.2□□□□□ -1.42
CLRN3-201ENST00000368671 TOMM7Q9P0U1 55 aa6.2□□□□□ -1.42
CLRN3-201ENST00000368671 PRSS2P07478 247 aa6.19□□□□□ -1.42
CLRN3-201ENST00000368671 RPL13AP40429 203 aaKnown RBP6.19□□□□□ -1.42
CLRN3-201ENST00000368671 LINC00469Q8N7U9 141 aa6.19□□□□□ -1.42
CLRN3-201ENST00000368671 C2orf88Q9BSF0 95 aa6.19□□□□□ -1.42
CLRN3-201ENST00000368671 MAP1LC3AQ9H492 121 aa6.19□□□□□ -1.42
CLRN3-201ENST00000368671 CKS1BP61024 79 aa6.18□□□□□ -1.42
CLRN3-201ENST00000368671 Q6ZN92 141 aa6.18□□□□□ -1.42
CLRN3-201ENST00000368671 ATP5L2Q7Z4Y8 100 aa6.18□□□□□ -1.42
CLRN3-201ENST00000368671 LINC01561Q8N1V8 128 aa6.18□□□□□ -1.42
CLRN3-201ENST00000368671 CYSLTR1Q9Y271 337 aa6.18□□□□□ -1.42
CLRN3-201ENST00000368671 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
CLRN3-201ENST00000368671 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
CLRN3-201ENST00000368671 C22orf24Q9Y442 160 aa6.17□□□□□ -1.42
CLRN3-201ENST00000368671 PRSS47A8MTI9 375 aa6.16□□□□□ -1.42
CLRN3-201ENST00000368671 NUPR1O60356 82 aa6.16□□□□□ -1.42
CLRN3-201ENST00000368671 ZNF861PO60384 105 aa6.16□□□□□ -1.42
CLRN3-201ENST00000368671 C6orf226Q5I0X4 101 aa6.16□□□□□ -1.42
CLRN3-201ENST00000368671 Q8N8P6 123 aa6.16□□□□□ -1.42
CLRN3-201ENST00000368671 ALKBH7Q9BT30 221 aaPredicted RBP6.16□□□□□ -1.42
CLRN3-201ENST00000368671 VCX2Q9H322 139 aa6.16□□□□□ -1.42
CLRN3-201ENST00000368671 XAGE1AQ9HD64 81 aa6.16□□□□□ -1.42
CLRN3-201ENST00000368671 LAMTOR2Q9Y2Q5 125 aa6.16□□□□□ -1.42
CLRN3-201ENST00000368671 CARHSP1Q9Y2V2 147 aaKnown RBP6.16□□□□□ -1.42
CLRN3-201ENST00000368671 B5MCH6 92 aa6.15□□□□□ -1.42
CLRN3-201ENST00000368671 TSPAN13O95857 204 aa6.15□□□□□ -1.42
CLRN3-201ENST00000368671 Q8IZM0 81 aa6.15□□□□□ -1.42
CLRN3-201ENST00000368671 AMELXQ99217 191 aa6.15□□□□□ -1.42
CLRN3-201ENST00000368671 CTDSP1Q9GZU7 261 aa6.15□□□□□ -1.42
CLRN3-201ENST00000368671 A0A1B0GVG6 124 aa6.14□□□□□ -1.43
CLRN3-201ENST00000368671 ORMDL2Q53FV1 153 aa6.14□□□□□ -1.43
CLRN3-201ENST00000368671 LBHQ53QV2 105 aaPredicted RBP6.14□□□□□ -1.43
CLRN3-201ENST00000368671 IGIPA6NJ69 53 aa6.13□□□□□ -1.43
CLRN3-201ENST00000368671 FAM19A3Q7Z5A8 133 aa6.13□□□□□ -1.43
CLRN3-201ENST00000368671 F8VRH5 84 aa6.12□□□□□ -1.43
CLRN3-201ENST00000368671 HERVK_113P63121 156 aa6.12□□□□□ -1.43
CLRN3-201ENST00000368671 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
CLRN3-201ENST00000368671 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
CLRN3-201ENST00000368671 CDKN2A-AS1Q9UH64 79 aa6.12□□□□□ -1.43
CLRN3-201ENST00000368671 A0A087X002 238 aa6.11□□□□□ -1.43
CLRN3-201ENST00000368671 NPSP0C0P6 89 aa6.11□□□□□ -1.43
CLRN3-201ENST00000368671 RPL28P46779 137 aaKnown RBP6.11□□□□□ -1.43
CLRN3-201ENST00000368671 SEC11AP67812 179 aa6.11□□□□□ -1.43
CLRN3-201ENST00000368671 RPL37AP8A6NKH3 93 aa6.1□□□□□ -1.43
CLRN3-201ENST00000368671 K7EMI3 77 aa6.1□□□□□ -1.43
CLRN3-201ENST00000368671 BCE1O60756 84 aa6.1□□□□□ -1.43
CLRN3-201ENST00000368671 MT-ND4LP03901 98 aa6.1□□□□□ -1.43
CLRN3-201ENST00000368671 CXCL5P42830 114 aa6.1□□□□□ -1.43
CLRN3-201ENST00000368671 PNRC1Q12796 327 aaPredicted RBP6.1□□□□□ -1.43
CLRN3-201ENST00000368671 PAPPA-AS1Q5QFB9 102 aa6.1□□□□□ -1.43
CLRN3-201ENST00000368671 TYMSOSQ8TAI1 123 aa6.1□□□□□ -1.43
CLRN3-201ENST00000368671 NXT2Q9NPJ8 142 aaKnown RBP6.1□□□□□ -1.43
CLRN3-201ENST00000368671 TP73-AS1Q9UF72 201 aa6.1□□□□□ -1.43
CLRN3-201ENST00000368671 A0A0U1RQV1 116 aa6.09□□□□□ -1.43
CLRN3-201ENST00000368671 GAGE10A6NGK3 116 aa6.09□□□□□ -1.43
CLRN3-201ENST00000368671 CRYGAP11844 174 aa6.09□□□□□ -1.43
CLRN3-201ENST00000368671 LINC00167Q96N53 147 aa6.09□□□□□ -1.43
CLRN3-201ENST00000368671 TIMM17AQ99595 171 aa6.09□□□□□ -1.43
CLRN3-201ENST00000368671 SMIM1B2RUZ4 78 aa6.08□□□□□ -1.44
CLRN3-201ENST00000368671 G0S2P27469 103 aa6.08□□□□□ -1.44
CLRN3-201ENST00000368671 KIAA1644Q3SXP7 199 aa6.08□□□□□ -1.44
CLRN3-201ENST00000368671 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
CLRN3-201ENST00000368671 TOMM6Q96B49 74 aa6.08□□□□□ -1.44
CLRN3-201ENST00000368671 SCGB3A1Q96QR1 104 aa6.08□□□□□ -1.44
CLRN3-201ENST00000368671 ANAPC11Q9NYG5 84 aa6.08□□□□□ -1.44
CLRN3-201ENST00000368671 UBE2AP49459 152 aa6.07□□□□□ -1.44
CLRN3-201ENST00000368671 RAB5BP61020 215 aa6.07□□□□□ -1.44
CLRN3-201ENST00000368671 SPINK8P0C7L1 97 aa6.06□□□□□ -1.44
CLRN3-201ENST00000368671 ADCYAP1P18509 176 aa6.06□□□□□ -1.44
CLRN3-201ENST00000368671 RAB14P61106 215 aa6.06□□□□□ -1.44
CLRN3-201ENST00000368671 PDZD11Q5EBL8 140 aa6.06□□□□□ -1.44
CLRN3-201ENST00000368671 ERASQ7Z444 233 aa6.06□□□□□ -1.44
CLRN3-201ENST00000368671 NKAPP1Q8N9T2 125 aa6.06□□□□□ -1.44
CLRN3-201ENST00000368671 TINCRA0A1B0GVN0 87 aa6.05□□□□□ -1.44
CLRN3-201ENST00000368671 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
CLRN3-201ENST00000368671 RETNLBQ9BQ08 111 aa6.05□□□□□ -1.44
CLRN3-201ENST00000368671 IGLV5-37A0A075B6J1 123 aa6.04□□□□□ -1.44
CLRN3-201ENST00000368671 IGKV2-28A0A075B6P5 120 aa6.04□□□□□ -1.44
CLRN3-201ENST00000368671 IGLV5-45A0A087WSX0 123 aa6.04□□□□□ -1.44
CLRN3-201ENST00000368671 SCO1O75880 301 aa6.04□□□□□ -1.44
CLRN3-201ENST00000368671 IGKV2D-28P01615 120 aa6.04□□□□□ -1.44
CLRN3-201ENST00000368671 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
CLRN3-201ENST00000368671 CST9LQ9H4G1 147 aa6.03□□□□□ -1.44
CLRN3-201ENST00000368671 MUC2Q02817 5179 aa6.03□□□□□ -1.44
CLRN3-201ENST00000368671 ATP5LO75964 103 aa6.02□□□□□ -1.45
CLRN3-201ENST00000368671 PFN2P35080 140 aa6.02□□□□□ -1.45
CLRN3-201ENST00000368671 PRLHP81277 87 aa6.02□□□□□ -1.45
CLRN3-201ENST00000368671 LINC00304Q8N9R0 145 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms