RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TMEM262E9PQX1 116 aa5.96□□□□□ -1.46
TPM3-213ENST00000368545 MPV17L2Q567V2 206 aa5.96□□□□□ -1.46
TPM3-213ENST00000368545 C2orf91Q6ZV80 131 aa5.96□□□□□ -1.46
TPM3-213ENST00000368545 PLEKHB2Q96CS7 222 aa5.96□□□□□ -1.46
TPM3-213ENST00000368545 HIGD1BQ9P298 99 aa5.96□□□□□ -1.46
TPM3-213ENST00000368545 TP73-AS1Q9UF72 201 aa5.96□□□□□ -1.46
TPM3-213ENST00000368545 COL7A1Q02388 2944 aa5.96□□□□□ -1.46
TPM3-213ENST00000368545 TRAV13-1A0A0B4J241 112 aa5.95□□□□□ -1.46
TPM3-213ENST00000368545 LEPROTO15243 131 aa5.95□□□□□ -1.46
TPM3-213ENST00000368545 LINC00242Q5T6M2 205 aa5.95□□□□□ -1.46
TPM3-213ENST00000368545 HUWE1Q7Z6Z7 4374 aaKnown RBP5.95□□□□□ -1.46
TPM3-213ENST00000368545 IGHV1-58A0A0C4DH39 117 aa5.95□□□□□ -1.46
TPM3-213ENST00000368545 J3QQQ9 107 aa5.95□□□□□ -1.46
TPM3-213ENST00000368545 CCL25O15444 150 aa5.95□□□□□ -1.46
TPM3-213ENST00000368545 LGALS3P17931 250 aaKnown RBP5.95□□□□□ -1.46
TPM3-213ENST00000368545 C15orf53Q8NAA6 179 aa5.95□□□□□ -1.46
TPM3-213ENST00000368545 ZNF815PA8K554 130 aa5.94□□□□□ -1.46
TPM3-213ENST00000368545 LYPD5Q6UWN5 251 aa5.94□□□□□ -1.46
TPM3-213ENST00000368545 Q6ZRP5 223 aa5.94□□□□□ -1.46
TPM3-213ENST00000368545 SNHG12Q9BXW3 62 aa5.94□□□□□ -1.46
TPM3-213ENST00000368545 TTTY13Q9BZ97 58 aa5.94□□□□□ -1.46
TPM3-213ENST00000368545 HSD52Q0P140 79 aa5.93□□□□□ -1.46
TPM3-213ENST00000368545 CDKN2A-AS1Q9UH64 79 aa5.93□□□□□ -1.46
TPM3-213ENST00000368545 IGHV3-30-3P0DP02 117 aa5.93□□□□□ -1.46
TPM3-213ENST00000368545 LINC01547P58512 204 aaPredicted RBP5.93□□□□□ -1.46
TPM3-213ENST00000368545 LINC00959A0A1B0GUT2 108 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 A0A1B0GVY2 172 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 ANGP03950 147 aaKnown RBP5.92□□□□□ -1.46
TPM3-213ENST00000368545 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 SS18Q15532 418 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 SCGB1D4Q6XE38 83 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 IGHV3-64A0A075B6Q5 118 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 IGKV3OR2-268A0A0C4DH90 116 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 SPINK8P0C7L1 97 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 HINT1P49773 126 aaPredicted RBP5.92□□□□□ -1.46
TPM3-213ENST00000368545 COX6A2Q02221 97 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 TAL2Q16559 108 aa5.92□□□□□ -1.46
TPM3-213ENST00000368545 TRAV8-3A0A0A6YYJ7 113 aa5.91□□□□□ -1.46
TPM3-213ENST00000368545 BATFQ16520 125 aa5.91□□□□□ -1.46
TPM3-213ENST00000368545 REG3AQ06141 175 aa5.9□□□□□ -1.46
TPM3-213ENST00000368545 BVES-AS1Q5T3Y7 98 aa5.9□□□□□ -1.46
TPM3-213ENST00000368545 LINC00269Q8N2A0 174 aa5.9□□□□□ -1.46
TPM3-213ENST00000368545 IGHV3OR16-9A0A0B4J2B5 98 aa5.9□□□□□ -1.47
TPM3-213ENST00000368545 COL5A1-AS1Q5SY13 56 aa5.9□□□□□ -1.47
TPM3-213ENST00000368545 ESRGQ1W209 222 aa5.89□□□□□ -1.47
TPM3-213ENST00000368545 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
TPM3-213ENST00000368545 PRR34Q9NV39 138 aa5.89□□□□□ -1.47
TPM3-213ENST00000368545 NDUFA12Q9UI09 145 aa5.89□□□□□ -1.47
TPM3-213ENST00000368545 NDUFA1O15239 70 aa5.89□□□□□ -1.47
TPM3-213ENST00000368545 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
TPM3-213ENST00000368545 HIST1H4GQ99525 98 aa5.89□□□□□ -1.47
TPM3-213ENST00000368545 VPS25Q9BRG1 176 aa5.89□□□□□ -1.47
TPM3-213ENST00000368545 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
TPM3-213ENST00000368545 LYSTQ99698 3801 aa5.88□□□□□ -1.47
TPM3-213ENST00000368545 A6NDN8 102 aa5.88□□□□□ -1.47
TPM3-213ENST00000368545 CRPP02741 224 aa5.88□□□□□ -1.47
TPM3-213ENST00000368545 WFDC10BQ8IUB3 73 aa5.88□□□□□ -1.47
TPM3-213ENST00000368545 CEND1Q8N111 149 aa5.88□□□□□ -1.47
TPM3-213ENST00000368545 ORAOV1Q8WV07 137 aa5.88□□□□□ -1.47
TPM3-213ENST00000368545 XCL1P47992 114 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 LINC01556Q5JQF7 62 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 SFTA2Q6UW10 78 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 SMIM29Q86T20 159 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 KLK12Q9UKR0 248 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 TRAV8-4A0A0B4J246 113 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 A0A0J9YXY3 114 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 IGLL5B9A064 214 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 CCL18P55774 89 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 C10orf126Q8N4M7 172 aa5.87□□□□□ -1.47
TPM3-213ENST00000368545 CHCHD10Q8WYQ3 142 aaPredicted RBP5.87□□□□□ -1.47
TPM3-213ENST00000368545 M0QXV9 152 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 TIMM17BO60830 172 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 IGHV3-30P01768 117 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 IGHV3-33P01772 117 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 IGHV3-30-5P0DP03 117 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 COX7B2Q8TF08 81 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 STAB2Q8WWQ8 2551 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 KRTAP9-6A0A140TA67 174 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 A0A1B0GV72 72 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 COX7A2LO14548 114 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 MIAQ16674 131 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 Q6ZVH6 145 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 C5orf38Q86SI9 138 aa5.86□□□□□ -1.47
TPM3-213ENST00000368545 DNAH10OSP0CZ25 163 aa5.85□□□□□ -1.47
TPM3-213ENST00000368545 CIRBPQ14011 172 aaKnown RBP5.85□□□□□ -1.47
TPM3-213ENST00000368545 ENHOQ6UWT2 76 aa5.85□□□□□ -1.47
TPM3-213ENST00000368545 ZNF625Q96I27 306 aaPredicted RBP5.85□□□□□ -1.47
TPM3-213ENST00000368545 UPK3BQ9BT76 320 aa5.85□□□□□ -1.47
TPM3-213ENST00000368545 Q8IZM0 81 aa5.84□□□□□ -1.47
TPM3-213ENST00000368545 SPANXDQ9BXN6 97 aa5.84□□□□□ -1.47
TPM3-213ENST00000368545 SPANXCQ9NY87 97 aa5.84□□□□□ -1.47
TPM3-213ENST00000368545 LINC00588Q9Y4M8 146 aa5.84□□□□□ -1.47
TPM3-213ENST00000368545 IGLV10-54A0A075B6I4 117 aa5.84□□□□□ -1.47
TPM3-213ENST00000368545 APOMO95445 188 aa5.84□□□□□ -1.47
TPM3-213ENST00000368545 FXYD2P54710 66 aa5.84□□□□□ -1.47
TPM3-213ENST00000368545 UBE2WQ96B02 151 aa5.84□□□□□ -1.47
TPM3-213ENST00000368545 CXCL5P42830 114 aa5.83□□□□□ -1.48
TPM3-213ENST00000368545 TOMM7Q9P0U1 55 aa5.83□□□□□ -1.48
TPM3-213ENST00000368545 COPS9Q8WXC6 57 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms