RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ODF3L2Q3SX64 289 aa13.96□□□□□ -0.18
TRIM58-201ENST00000366481 Q6ZTI0 123 aa13.96□□□□□ -0.18
TRIM58-201ENST00000366481 OVOL2Q9BRP0 275 aa13.95□□□□□ -0.18
TRIM58-201ENST00000366481 C4orf26Q17RF5 130 aa13.95□□□□□ -0.18
TRIM58-201ENST00000366481 STHQ8IWL8 128 aa13.94□□□□□ -0.18
TRIM58-201ENST00000366481 INSP01308 110 aa13.94□□□□□ -0.18
TRIM58-201ENST00000366481 HILS1P60008 231 aa13.93□□□□□ -0.18
TRIM58-201ENST00000366481 COX7B2Q8TF08 81 aa13.93□□□□□ -0.18
TRIM58-201ENST00000366481 PF4P02776 101 aa13.92□□□□□ -0.18
TRIM58-201ENST00000366481 SMR3AQ99954 134 aa13.92□□□□□ -0.18
TRIM58-201ENST00000366481 FSHBP01225 129 aa13.92□□□□□ -0.18
TRIM58-201ENST00000366481 RPS28P62857 69 aaKnown RBP13.92□□□□□ -0.18
TRIM58-201ENST00000366481 Q6JHZ5 121 aa13.92□□□□□ -0.18
TRIM58-201ENST00000366481 RPL35AP18077 110 aaKnown RBP13.91□□□□□ -0.18
TRIM58-201ENST00000366481 C1orf158Q8N1D5 194 aa13.91□□□□□ -0.18
TRIM58-201ENST00000366481 LINC01561Q8N1V8 128 aa13.91□□□□□ -0.18
TRIM58-201ENST00000366481 H0YGX0 51 aa13.91□□□□□ -0.18
TRIM58-201ENST00000366481 GHRHP01286 108 aa13.91□□□□□ -0.18
TRIM58-201ENST00000366481 IGKV2-28A0A075B6P5 120 aa13.9□□□□□ -0.18
TRIM58-201ENST00000366481 IGKV2D-28P01615 120 aa13.9□□□□□ -0.18
TRIM58-201ENST00000366481 C4orf3Q8WVX3 66 aa13.9□□□□□ -0.18
TRIM58-201ENST00000366481 NOP10Q9NPE3 64 aaKnown RBP13.9□□□□□ -0.18
TRIM58-201ENST00000366481 CDC42SE2Q9NRR3 84 aa13.9□□□□□ -0.18
TRIM58-201ENST00000366481 LOC100131303A0A0U1RQF7 123 aa13.9□□□□□ -0.18
TRIM58-201ENST00000366481 CCL18P55774 89 aa13.89□□□□□ -0.19
TRIM58-201ENST00000366481 NTM-AS1Q6ZSK4 140 aa13.88□□□□□ -0.19
TRIM58-201ENST00000366481 C20orf197Q8N268 126 aa13.88□□□□□ -0.19
TRIM58-201ENST00000366481 ORMDL1Q9P0S3 153 aa13.88□□□□□ -0.19
TRIM58-201ENST00000366481 TMEM243Q9BU79 118 aa13.88□□□□□ -0.19
TRIM58-201ENST00000366481 F5H768 121 aa13.87□□□□□ -0.19
TRIM58-201ENST00000366481 ENHOQ6UWT2 76 aa13.86□□□□□ -0.19
TRIM58-201ENST00000366481 OTOGQ6ZRI0 2925 aa13.86□□□□□ -0.19
TRIM58-201ENST00000366481 K7EQD1 137 aa13.86□□□□□ -0.19
TRIM58-201ENST00000366481 ESM1Q9NQ30 184 aa13.86□□□□□ -0.19
TRIM58-201ENST00000366481 C6orf226Q5I0X4 101 aa13.85□□□□□ -0.19
TRIM58-201ENST00000366481 TRGV2A0A075B6R0 118 aa13.85□□□□□ -0.19
TRIM58-201ENST00000366481 DNAJC9-AS1A6NH13 148 aa13.85□□□□□ -0.19
TRIM58-201ENST00000366481 CCL24O00175 119 aa13.85□□□□□ -0.19
TRIM58-201ENST00000366481 FAM19A1Q7Z5A9 133 aa13.85□□□□□ -0.19
TRIM58-201ENST00000366481 VWFP04275 2813 aa13.85□□□□□ -0.19
TRIM58-201ENST00000366481 OXTP01178 125 aa13.83□□□□□ -0.19
TRIM58-201ENST00000366481 FHL2Q14192 279 aa13.83□□□□□ -0.19
TRIM58-201ENST00000366481 A8MTW9 85 aa13.81□□□□□ -0.2
TRIM58-201ENST00000366481 F8P00451 2351 aa13.8□□□□□ -0.2
TRIM58-201ENST00000366481 S100A7L2Q5SY68 101 aa13.8□□□□□ -0.2
TRIM58-201ENST00000366481 UPK3BQ9BT76 320 aa13.8□□□□□ -0.2
TRIM58-201ENST00000366481 TRAV25A0A0B4J276 109 aa13.8□□□□□ -0.2
TRIM58-201ENST00000366481 PRR3P79522 188 aaKnown RBP13.79□□□□□ -0.2
TRIM58-201ENST00000366481 UBL5Q9BZL1 73 aa13.79□□□□□ -0.2
TRIM58-201ENST00000366481 KRTAP1-3Q8IUG1 177 aa13.79□□□□□ -0.2
TRIM58-201ENST00000366481 CCKP06307 115 aa13.78□□□□□ -0.2
TRIM58-201ENST00000366481 TMEM86BQ8N661 226 aa13.78□□□□□ -0.2
TRIM58-201ENST00000366481 TRGV4A0A0C4DH28 118 aa13.77□□□□□ -0.2
TRIM58-201ENST00000366481 HAMPP81172 84 aa13.76□□□□□ -0.21
TRIM58-201ENST00000366481 CLPSL2Q6UWE3 100 aa13.76□□□□□ -0.21
TRIM58-201ENST00000366481 XCL1P47992 114 aa13.76□□□□□ -0.21
TRIM58-201ENST00000366481 PDZD2O15018 2839 aa13.76□□□□□ -0.21
TRIM58-201ENST00000366481 TRBV10-1A0A0K0K1A3 114 aa13.75□□□□□ -0.21
TRIM58-201ENST00000366481 IGLV4-60A0A075B6I1 120 aa13.75□□□□□ -0.21
TRIM58-201ENST00000366481 TENM1Q9UKZ4 2725 aa13.75□□□□□ -0.21
TRIM58-201ENST00000366481 GIG44P09565 113 aaPredicted RBP13.74□□□□□ -0.21
TRIM58-201ENST00000366481 IBA57-AS1B1ANH7 110 aa13.73□□□□□ -0.21
TRIM58-201ENST00000366481 J3QKU1 62 aa13.73□□□□□ -0.21
TRIM58-201ENST00000366481 DEFB130BP0DP73 79 aa13.73□□□□□ -0.21
TRIM58-201ENST00000366481 DEFB130AP0DP74 79 aa13.73□□□□□ -0.21
TRIM58-201ENST00000366481 A0A096LPF7 62 aa13.73□□□□□ -0.21
TRIM58-201ENST00000366481 HIVEP1P15822 2718 aa13.73□□□□□ -0.21
TRIM58-201ENST00000366481 FAM236DA0A1B0GTK5 79 aa13.72□□□□□ -0.21
TRIM58-201ENST00000366481 JMJD7-PLA2G4BH0Y9G9 81 aa13.72□□□□□ -0.21
TRIM58-201ENST00000366481 FAM236CP0DP71 79 aa13.72□□□□□ -0.21
TRIM58-201ENST00000366481 LAMTOR3Q9UHA4 124 aa13.72□□□□□ -0.21
TRIM58-201ENST00000366481 MAST4O15021 2626 aa13.71□□□□□ -0.21
TRIM58-201ENST00000366481 NDUFC2O95298 119 aa13.71□□□□□ -0.21
TRIM58-201ENST00000366481 TRBV6-4A0A1B0GX49 114 aa13.71□□□□□ -0.22
TRIM58-201ENST00000366481 LINC01006Q8NI28 216 aa13.7□□□□□ -0.22
TRIM58-201ENST00000366481 SNURFQ9Y675 71 aa13.7□□□□□ -0.22
TRIM58-201ENST00000366481 OBSCN-AS1Q96MR7 158 aa13.7□□□□□ -0.22
TRIM58-201ENST00000366481 FAM19A3Q7Z5A8 133 aa13.69□□□□□ -0.22
TRIM58-201ENST00000366481 TMEM256-PLSCR3K7ERE1 68 aa13.69□□□□□ -0.22
TRIM58-201ENST00000366481 Q5XG85 94 aa13.69□□□□□ -0.22
TRIM58-201ENST00000366481 Q8N814 137 aa13.67□□□□□ -0.22
TRIM58-201ENST00000366481 IGHV3OR16-9A0A0B4J2B5 98 aa13.66□□□□□ -0.22
TRIM58-201ENST00000366481 PLAC8L1A1L4L8 177 aa13.66□□□□□ -0.22
TRIM58-201ENST00000366481 IL17DQ8TAD2 202 aa13.66□□□□□ -0.22
TRIM58-201ENST00000366481 NSD1Q96L73 2696 aaPredicted RBP13.66□□□□□ -0.22
TRIM58-201ENST00000366481 STAB1Q9NY15 2570 aa13.66□□□□□ -0.22
TRIM58-201ENST00000366481 SS18Q15532 418 aa13.65□□□□□ -0.22
TRIM58-201ENST00000366481 C1orf43Q9BWL3 253 aa13.65□□□□□ -0.22
TRIM58-201ENST00000366481 ANK3Q12955 4377 aaKnown RBP13.65□□□□□ -0.22
TRIM58-201ENST00000366481 DEFB4AO15263 64 aa13.64□□□□□ -0.23
TRIM58-201ENST00000366481 ATP5EP2Q5VTU8 51 aa13.64□□□□□ -0.23
TRIM58-201ENST00000366481 WIPF1O43516 503 aa13.64□□□□□ -0.23
TRIM58-201ENST00000366481 C6orf99Q4VX62 202 aa13.64□□□□□ -0.23
TRIM58-201ENST00000366481 NOTCH1P46531 2555 aa13.63□□□□□ -0.23
TRIM58-201ENST00000366481 A0A087WZ39 114 aa13.63□□□□□ -0.23
TRIM58-201ENST00000366481 TRBV6-8A0A0A6YYG3 113 aa13.62□□□□□ -0.23
TRIM58-201ENST00000366481 RBM3P98179 157 aaKnown RBP13.62□□□□□ -0.23
TRIM58-201ENST00000366481 LINC00959A0A1B0GUT2 108 aa13.6□□□□□ -0.23
TRIM58-201ENST00000366481 SCXQ7RTU7 201 aa13.6□□□□□ -0.23
TRIM58-201ENST00000366481 IGLV10-54A0A075B6I4 117 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms