RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 KIAA1551Q9HCM1 1747 aa-3.39□□□□□ -2.95
RNU6-340P-201ENST00000364005 NIPSNAP2O75323 286 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 C4AP0C0L4 1744 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 C4BP0C0L5 1744 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 HLA-DRB4P13762 266 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 CEBPGP53567 150 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 S100A7L2Q5SY68 101 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 PRG4Q92954 1404 aaPredicted RBP-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 AQP10Q96PS8 301 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 ARMC1Q9NVT9 282 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 SMPXQ9UHP9 88 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 TIMM8BQ9Y5J9 83 aaPredicted RBP-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 HLA-DRB4X5D2U9 266 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 ZNF831Q5JPB2 1677 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 ARHGEF10O15013 1369 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 RGPD2P0DJD1 1756 aa-3.4□□□□□ -2.95
RNU6-340P-201ENST00000364005 MAST1Q9Y2H9 1570 aa-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 ATG12O94817 140 aa-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 LSM6P62312 80 aaKnown RBP-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 NMSQ5H8A3 153 aa-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 PRO1933Q9H354 126 aa-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 COPZ2Q9P299 210 aa-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 LSM2Q9Y333 95 aaKnown RBP-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 ANKRD36A6QL64 1941 aa-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 SCN11AQ9UI33 1791 aa-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 PLEKHH2Q8IVE3 1493 aa-3.41□□□□□ -2.96
RNU6-340P-201ENST00000364005 MYH3P11055 1940 aa-3.42□□□□□ -2.96
RNU6-340P-201ENST00000364005 F8WEM9 126 aa-3.42□□□□□ -2.96
RNU6-340P-201ENST00000364005 RPP14O95059 124 aaKnown RBP-3.42□□□□□ -2.96
RNU6-340P-201ENST00000364005 C5orf38Q86SI9 138 aa-3.42□□□□□ -2.96
RNU6-340P-201ENST00000364005 CDC26Q8NHZ8 85 aa-3.42□□□□□ -2.96
RNU6-340P-201ENST00000364005 MED31Q9Y3C7 131 aa-3.42□□□□□ -2.96
RNU6-340P-201ENST00000364005 NLRP1Q9C000 1473 aa-3.42□□□□□ -2.96
RNU6-340P-201ENST00000364005 SHROOM2Q13796 1616 aa-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 LRRC37AA6NMS7 1700 aa-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 A0A1B0GU69 56 aa-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 E7EQ34 232 aa-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 IGLC1P0CG04 106 aa-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 DYDC1Q8WWB3 177 aa-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 SEC11CQ9BY50 192 aa-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 FAIMQ9NVQ4 179 aa-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 EIF3AQ14152 1382 aaKnown RBP-3.43□□□□□ -2.96
RNU6-340P-201ENST00000364005 MYH13Q9UKX3 1938 aa-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 HMGN4O00479 90 aa-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 HIST1H1DP16402 221 aaKnown RBP-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 SNCAP37840 140 aa-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 SPA17Q15506 151 aa-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 MIC13Q5XKP0 118 aa-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 DYNLRB1Q9NP97 96 aa-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 TRAPPC2LQ9UL33 140 aa-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 EDC4Q6P2E9 1401 aaKnown RBP-3.44□□□□□ -2.96
RNU6-340P-201ENST00000364005 SPTY2D1-AS1A0A0U1RR47 76 aa-3.45□□□□□ -2.96
RNU6-340P-201ENST00000364005 FAM107AO95990 144 aa-3.45□□□□□ -2.96
RNU6-340P-201ENST00000364005 DEFB130BP0DP73 79 aa-3.45□□□□□ -2.96
RNU6-340P-201ENST00000364005 DEFB130AP0DP74 79 aa-3.45□□□□□ -2.96
RNU6-340P-201ENST00000364005 SCGB1A1P11684 91 aa-3.45□□□□□ -2.96
RNU6-340P-201ENST00000364005 COX6B2Q6YFQ2 88 aa-3.45□□□□□ -2.96
RNU6-340P-201ENST00000364005 SYNJ1O43426 1573 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 UNC80Q8N2C7 3258 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 IFT140Q96RY7 1462 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 ARAP2Q8WZ64 1704 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 TRAV13-2A0A0B4J235 113 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 HSBP1L1C9JCN9 74 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 SMIM24O75264 130 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 TPM1P09493 284 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 FAM24BQ8N5W8 94 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 TTTY10Q9BZA0 68 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 BANF2Q9H503 90 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 TET3O43151 1660 aa-3.46□□□□□ -2.96
RNU6-340P-201ENST00000364005 PLB1Q6P1J6 1458 aa-3.47□□□□□ -2.96
RNU6-340P-201ENST00000364005 IL5P05113 134 aa-3.47□□□□□ -2.96
RNU6-340P-201ENST00000364005 OR13C6PQ8NH95 151 aa-3.47□□□□□ -2.96
RNU6-340P-201ENST00000364005 CALML5Q9NZT1 146 aa-3.47□□□□□ -2.96
RNU6-340P-201ENST00000364005 ATP10BO94823 1461 aa-3.47□□□□□ -2.97
RNU6-340P-201ENST00000364005 TMEM78Q5T7P6 136 aa-3.48□□□□□ -2.97
RNU6-340P-201ENST00000364005 MRPL54Q6P161 138 aaKnown RBP-3.48□□□□□ -2.97
RNU6-340P-201ENST00000364005 MGST2Q99735 147 aa-3.48□□□□□ -2.97
RNU6-340P-201ENST00000364005 PARVGQ9HBI0 331 aa-3.48□□□□□ -2.97
RNU6-340P-201ENST00000364005 NXT2Q9NPJ8 142 aaKnown RBP-3.48□□□□□ -2.97
RNU6-340P-201ENST00000364005 DIP2CQ9Y2E4 1556 aa-3.48□□□□□ -2.97
RNU6-340P-201ENST00000364005 PDCD11Q14690 1871 aaKnown RBP-3.48□□□□□ -2.97
RNU6-340P-201ENST00000364005 CAMSAP1Q5T5Y3 1602 aa-3.48□□□□□ -2.97
RNU6-340P-201ENST00000364005 MYOM1P52179 1685 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 TNRC6CQ9HCJ0 1690 aaKnown RBP-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 TOGARAM1Q9Y4F4 1720 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 SMIM23A6NLE4 172 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 C3orf79P0CE67 100 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 POLR2HP52434 150 aaKnown RBP-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 WHAMMP3Q1A5X7 153 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 PPP1R2P3Q6NXS1 205 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 TAC4Q86UU9 113 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 CTAGE3PQ8IX95 158 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 NKIRAS1Q9NYS0 192 aa-3.49□□□□□ -2.97
RNU6-340P-201ENST00000364005 PLXNC1O60486 1568 aa-3.5□□□□□ -2.97
RNU6-340P-201ENST00000364005 DNMBPQ6XZF7 1577 aa-3.5□□□□□ -2.97
RNU6-340P-201ENST00000364005 TRBV20-1A0A075B6N2 111 aa-3.5□□□□□ -2.97
RNU6-340P-201ENST00000364005 LOC285095A0A1B0GVY8 99 aa-3.5□□□□□ -2.97
RNU6-340P-201ENST00000364005 SNCGO76070 127 aa-3.5□□□□□ -2.97
RNU6-340P-201ENST00000364005 LINC00158P58513 81 aa-3.5□□□□□ -2.97
RNU6-340P-201ENST00000364005 MYOZ3Q8TDC0 251 aa-3.5□□□□□ -2.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms