RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 NDUFB1O75438 58 aa9.79□□□□□ -0.84
CTR9-201ENST00000361367 NDUFS5O43920 106 aa9.78□□□□□ -0.84
CTR9-201ENST00000361367 WFDC9Q8NEX5 89 aa9.78□□□□□ -0.84
CTR9-201ENST00000361367 AKAP13Q12802 2813 aa9.78□□□□□ -0.84
CTR9-201ENST00000361367 CFAP54Q96N23 3096 aa9.78□□□□□ -0.84
CTR9-201ENST00000361367 MUC7Q8TAX7 377 aa9.78□□□□□ -0.84
CTR9-201ENST00000361367 PDE6GP18545 87 aa9.77□□□□□ -0.84
CTR9-201ENST00000361367 EGFEM1PQ0D2K5 195 aa9.77□□□□□ -0.84
CTR9-201ENST00000361367 X6R8D5 127 aa9.77□□□□□ -0.84
CTR9-201ENST00000361367 LINC00315P59091 139 aa9.77□□□□□ -0.85
CTR9-201ENST00000361367 KRTAP1-3Q8IUG1 177 aa9.77□□□□□ -0.85
CTR9-201ENST00000361367 C14orf132Q9NPU4 83 aa9.77□□□□□ -0.85
CTR9-201ENST00000361367 TRBV30A0A0K0K1B3 111 aa9.77□□□□□ -0.85
CTR9-201ENST00000361367 SLPIP03973 132 aa9.77□□□□□ -0.85
CTR9-201ENST00000361367 USP17L23D6RBM5 183 aa9.76□□□□□ -0.85
CTR9-201ENST00000361367 FOXI1Q12951 378 aa9.76□□□□□ -0.85
CTR9-201ENST00000361367 SBSPONQ8IVN8 264 aa9.76□□□□□ -0.85
CTR9-201ENST00000361367 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
CTR9-201ENST00000361367 IGKV3D-7A0A0C4DH55 119 aa9.75□□□□□ -0.85
CTR9-201ENST00000361367 TEP1Q99973 2627 aaKnown RBP9.75□□□□□ -0.85
CTR9-201ENST00000361367 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
CTR9-201ENST00000361367 LINC00474Q9P2X8 69 aa9.74□□□□□ -0.85
CTR9-201ENST00000361367 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
CTR9-201ENST00000361367 Q6ZQY7 126 aa9.72□□□□□ -0.85
CTR9-201ENST00000361367 SMIM11BQ8TCY0 68 aa9.72□□□□□ -0.85
CTR9-201ENST00000361367 C6orf223Q8N319 242 aa9.71□□□□□ -0.85
CTR9-201ENST00000361367 NTM-AS1Q6ZSK4 140 aa9.71□□□□□ -0.86
CTR9-201ENST00000361367 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
CTR9-201ENST00000361367 IGSF10Q6WRI0 2623 aa9.69□□□□□ -0.86
CTR9-201ENST00000361367 ESRGQ1W209 222 aa9.69□□□□□ -0.86
CTR9-201ENST00000361367 Q9UF83 564 aa9.69□□□□□ -0.86
CTR9-201ENST00000361367 KRTAP1-1Q07627 177 aa9.69□□□□□ -0.86
CTR9-201ENST00000361367 DHRS4-AS1Q9P1J3 65 aa9.69□□□□□ -0.86
CTR9-201ENST00000361367 TEX49A0A1B0GTD5 131 aa9.68□□□□□ -0.86
CTR9-201ENST00000361367 PPDPFQ9H3Y8 114 aa9.68□□□□□ -0.86
CTR9-201ENST00000361367 C1orf134Q5TEV5 83 aa9.68□□□□□ -0.86
CTR9-201ENST00000361367 Q8NAQ8 132 aa9.68□□□□□ -0.86
CTR9-201ENST00000361367 M0QXV9 152 aa9.67□□□□□ -0.86
CTR9-201ENST00000361367 VPS13AQ96RL7 3174 aa9.67□□□□□ -0.86
CTR9-201ENST00000361367 H0Y9J4 135 aa9.67□□□□□ -0.86
CTR9-201ENST00000361367 SZT2Q5T011 3432 aa9.66□□□□□ -0.86
CTR9-201ENST00000361367 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
CTR9-201ENST00000361367 LINC01556Q5JQF7 62 aa9.66□□□□□ -0.86
CTR9-201ENST00000361367 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
CTR9-201ENST00000361367 C2orf48Q96LS8 159 aa9.66□□□□□ -0.86
CTR9-201ENST00000361367 IGLV5-52A0A0A0MRZ9 124 aa9.66□□□□□ -0.86
CTR9-201ENST00000361367 PLAC8L1A1L4L8 177 aa9.66□□□□□ -0.86
CTR9-201ENST00000361367 LST1O00453 97 aa9.65□□□□□ -0.86
CTR9-201ENST00000361367 H3BNG1 76 aa9.65□□□□□ -0.86
CTR9-201ENST00000361367 PRR3P79522 188 aaKnown RBP9.65□□□□□ -0.86
CTR9-201ENST00000361367 MDFIQ99750 246 aa9.65□□□□□ -0.86
CTR9-201ENST00000361367 TRBV10-3A0A0K0K1G6 114 aa9.65□□□□□ -0.87
CTR9-201ENST00000361367 BPY2O14599 106 aa9.64□□□□□ -0.87
CTR9-201ENST00000361367 LINC01561Q8N1V8 128 aa9.64□□□□□ -0.87
CTR9-201ENST00000361367 IGHV3OR16-9A0A0B4J2B5 98 aa9.63□□□□□ -0.87
CTR9-201ENST00000361367 KRTAP10-3P60369 221 aa9.63□□□□□ -0.87
CTR9-201ENST00000361367 MAP1AP78559 2803 aaPredicted RBP9.63□□□□□ -0.87
CTR9-201ENST00000361367 CCKP06307 115 aa9.63□□□□□ -0.87
CTR9-201ENST00000361367 A0A1B0GX51 115 aa9.63□□□□□ -0.87
CTR9-201ENST00000361367 F8WDY8 70 aa9.63□□□□□ -0.87
CTR9-201ENST00000361367 ZNF706Q9Y5V0 76 aaPredicted RBP9.63□□□□□ -0.87
CTR9-201ENST00000361367 UNC79Q9P2D8 2635 aa9.62□□□□□ -0.87
CTR9-201ENST00000361367 Q6ZRU5 148 aa9.62□□□□□ -0.87
CTR9-201ENST00000361367 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
CTR9-201ENST00000361367 LINC01546A6NGU7 62 aa9.62□□□□□ -0.87
CTR9-201ENST00000361367 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
CTR9-201ENST00000361367 FAM236AA0A1B0GUQ0 79 aa9.61□□□□□ -0.87
CTR9-201ENST00000361367 FAM236BA0A1B0GV22 79 aa9.61□□□□□ -0.87
CTR9-201ENST00000361367 CHD6Q8TD26 2715 aa9.6□□□□□ -0.87
CTR9-201ENST00000361367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.6□□□□□ -0.87
CTR9-201ENST00000361367 A8MTW9 85 aa9.6□□□□□ -0.87
CTR9-201ENST00000361367 MP68P56378 58 aa9.59□□□□□ -0.87
CTR9-201ENST00000361367 IGLV5-39A0A0G2JS06 123 aa9.58□□□□□ -0.88
CTR9-201ENST00000361367 CSNK1G2-AS1Q8NCQ2 148 aa9.58□□□□□ -0.88
CTR9-201ENST00000361367 STAB1Q9NY15 2570 aa9.58□□□□□ -0.88
CTR9-201ENST00000361367 RPL28P46779 137 aaKnown RBP9.58□□□□□ -0.88
CTR9-201ENST00000361367 ATOX1O00244 68 aa9.57□□□□□ -0.88
CTR9-201ENST00000361367 KRTAP10-11P60412 298 aa9.57□□□□□ -0.88
CTR9-201ENST00000361367 C3orf84H3BNL1 204 aa9.57□□□□□ -0.88
CTR9-201ENST00000361367 NDUFC2O95298 119 aa9.57□□□□□ -0.88
CTR9-201ENST00000361367 K7EIL1 84 aa9.56□□□□□ -0.88
CTR9-201ENST00000361367 REG3GQ6UW15 175 aa9.56□□□□□ -0.88
CTR9-201ENST00000361367 C19orf73Q9NVV2 129 aa9.56□□□□□ -0.88
CTR9-201ENST00000361367 IGLV9-49A0A0B4J1Y8 123 aa9.55□□□□□ -0.88
CTR9-201ENST00000361367 SCXQ7RTU7 201 aa9.55□□□□□ -0.88
CTR9-201ENST00000361367 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
CTR9-201ENST00000361367 Q8N3U1 123 aa9.55□□□□□ -0.88
CTR9-201ENST00000361367 NDUFV3P56181 108 aaKnown RBP9.54□□□□□ -0.88
CTR9-201ENST00000361367 UPK3BQ9BT76 320 aa9.54□□□□□ -0.88
CTR9-201ENST00000361367 TEX15Q9BXT5 2789 aa9.53□□□□□ -0.88
CTR9-201ENST00000361367 LINC00588Q9Y4M8 146 aa9.53□□□□□ -0.88
CTR9-201ENST00000361367 COL6A5A8TX70 2615 aa9.53□□□□□ -0.88
CTR9-201ENST00000361367 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
CTR9-201ENST00000361367 Q8N814 137 aa9.52□□□□□ -0.88
CTR9-201ENST00000361367 SS18L2Q9UHA2 77 aa9.52□□□□□ -0.88
CTR9-201ENST00000361367 IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
CTR9-201ENST00000361367 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
CTR9-201ENST00000361367 HRCT1Q6UXD1 115 aa9.52□□□□□ -0.89
CTR9-201ENST00000361367 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.89
CTR9-201ENST00000361367 BAHCC1Q9P281 2608 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms