RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 PRRC2AP48634 2157 aaKnown RBP9.58□□□□□ -0.88
CCDC144A-203ENST00000360495 PTPN13Q12923 2485 aa9.58□□□□□ -0.88
CCDC144A-203ENST00000360495 SMIM29Q86T20 159 aa9.57□□□□□ -0.88
CCDC144A-203ENST00000360495 C1orf64Q8NEQ6 169 aa9.57□□□□□ -0.88
CCDC144A-203ENST00000360495 RETNLBQ9BQ08 111 aa9.57□□□□□ -0.88
CCDC144A-203ENST00000360495 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
CCDC144A-203ENST00000360495 Q9BRP9 147 aa9.56□□□□□ -0.88
CCDC144A-203ENST00000360495 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
CCDC144A-203ENST00000360495 ZFHX2Q9C0A1 2572 aaPredicted RBP9.56□□□□□ -0.88
CCDC144A-203ENST00000360495 ATG2AQ2TAZ0 1938 aa9.56□□□□□ -0.88
CCDC144A-203ENST00000360495 LINC00474Q9P2X8 69 aa9.56□□□□□ -0.88
CCDC144A-203ENST00000360495 BCE1O60756 84 aa9.55□□□□□ -0.88
CCDC144A-203ENST00000360495 ODF3L2Q3SX64 289 aa9.55□□□□□ -0.88
CCDC144A-203ENST00000360495 Q6ZSN1 163 aa9.54□□□□□ -0.88
CCDC144A-203ENST00000360495 CACNA1AO00555 2505 aa9.54□□□□□ -0.88
CCDC144A-203ENST00000360495 LINC01006Q8NI28 216 aa9.54□□□□□ -0.88
CCDC144A-203ENST00000360495 X6R8D5 127 aa9.54□□□□□ -0.88
CCDC144A-203ENST00000360495 NOTCH2Q04721 2471 aa9.53□□□□□ -0.88
CCDC144A-203ENST00000360495 LINC01546A6NGU7 62 aa9.52□□□□□ -0.89
CCDC144A-203ENST00000360495 SPAG11AQ6PDA7 123 aa9.52□□□□□ -0.89
CCDC144A-203ENST00000360495 CIRBP-AS1Q8TBR5 109 aa9.52□□□□□ -0.89
CCDC144A-203ENST00000360495 Q8N2B8 174 aa9.52□□□□□ -0.89
CCDC144A-203ENST00000360495 PRO3102Q9H379 93 aa9.52□□□□□ -0.89
CCDC144A-203ENST00000360495 FHL2Q14192 279 aa9.52□□□□□ -0.89
CCDC144A-203ENST00000360495 SPATA3Q8NHX4 192 aa9.52□□□□□ -0.89
CCDC144A-203ENST00000360495 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
CCDC144A-203ENST00000360495 TTC28Q96AY4 2481 aa9.51□□□□□ -0.89
CCDC144A-203ENST00000360495 M0R2N4 97 aa9.5□□□□□ -0.89
CCDC144A-203ENST00000360495 MUC6Q6W4X9 2439 aa9.5□□□□□ -0.89
CCDC144A-203ENST00000360495 VPREB1P12018 145 aa9.49□□□□□ -0.89
CCDC144A-203ENST00000360495 A0A1B0GU69 56 aa9.49□□□□□ -0.89
CCDC144A-203ENST00000360495 BDP1A6H8Y1 2624 aa9.49□□□□□ -0.89
CCDC144A-203ENST00000360495 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
CCDC144A-203ENST00000360495 A0A1B0GUV1 79 aa9.48□□□□□ -0.89
CCDC144A-203ENST00000360495 FAM218AQ96MZ4 157 aa9.48□□□□□ -0.89
CCDC144A-203ENST00000360495 MYO18BQ8IUG5 2567 aa9.47□□□□□ -0.89
CCDC144A-203ENST00000360495 LINC01561Q8N1V8 128 aa9.47□□□□□ -0.89
CCDC144A-203ENST00000360495 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
CCDC144A-203ENST00000360495 DSCAMO60469 2012 aa9.47□□□□□ -0.89
CCDC144A-203ENST00000360495 INAFM1C9JVW0 142 aa9.46□□□□□ -0.9
CCDC144A-203ENST00000360495 AGRNO00468 2067 aa9.46□□□□□ -0.9
CCDC144A-203ENST00000360495 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
CCDC144A-203ENST00000360495 KIAA0087Q14695 138 aa9.44□□□□□ -0.9
CCDC144A-203ENST00000360495 DOPEY1Q5JWR5 2465 aa9.44□□□□□ -0.9
CCDC144A-203ENST00000360495 F8WDY8 70 aa9.43□□□□□ -0.9
CCDC144A-203ENST00000360495 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
CCDC144A-203ENST00000360495 TM2D3Q9BRN9 247 aa9.43□□□□□ -0.9
CCDC144A-203ENST00000360495 Q6ZRU5 148 aa9.42□□□□□ -0.9
CCDC144A-203ENST00000360495 Q6ZTC4 211 aa9.42□□□□□ -0.9
CCDC144A-203ENST00000360495 LTBP2Q14767 1821 aa9.42□□□□□ -0.9
CCDC144A-203ENST00000360495 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
CCDC144A-203ENST00000360495 HIVEP3Q5T1R4 2406 aa9.41□□□□□ -0.9
CCDC144A-203ENST00000360495 PRLHP81277 87 aa9.41□□□□□ -0.9
CCDC144A-203ENST00000360495 Q6ZQT0 140 aa9.41□□□□□ -0.9
CCDC144A-203ENST00000360495 AVPP01185 164 aa9.4□□□□□ -0.9
CCDC144A-203ENST00000360495 ACYP2P14621 99 aa9.39□□□□□ -0.91
CCDC144A-203ENST00000360495 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
CCDC144A-203ENST00000360495 LINC01556Q5JQF7 62 aa9.39□□□□□ -0.91
CCDC144A-203ENST00000360495 IGLV1-51P01701 117 aa9.39□□□□□ -0.91
CCDC144A-203ENST00000360495 TP53AIP1Q9HCN2 124 aa9.39□□□□□ -0.91
CCDC144A-203ENST00000360495 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
CCDC144A-203ENST00000360495 IGKV2D-30A0A075B6S6 120 aa9.38□□□□□ -0.91
CCDC144A-203ENST00000360495 FSHBP01225 129 aa9.38□□□□□ -0.91
CCDC144A-203ENST00000360495 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
CCDC144A-203ENST00000360495 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
CCDC144A-203ENST00000360495 BRI3O95415 125 aa9.38□□□□□ -0.91
CCDC144A-203ENST00000360495 LINC00315P59091 139 aa9.38□□□□□ -0.91
CCDC144A-203ENST00000360495 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
CCDC144A-203ENST00000360495 C7orf65Q6ZTY9 151 aa9.37□□□□□ -0.91
CCDC144A-203ENST00000360495 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
CCDC144A-203ENST00000360495 H3BPC8 53 aa9.36□□□□□ -0.91
CCDC144A-203ENST00000360495 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
CCDC144A-203ENST00000360495 IGLV5-45A0A087WSX0 123 aa9.35□□□□□ -0.91
CCDC144A-203ENST00000360495 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
CCDC144A-203ENST00000360495 LYPD5Q6UWN5 251 aa9.35□□□□□ -0.91
CCDC144A-203ENST00000360495 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
CCDC144A-203ENST00000360495 A0A1B0GW54 56 aa9.34□□□□□ -0.91
CCDC144A-203ENST00000360495 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
CCDC144A-203ENST00000360495 NAV2Q8IVL1 2488 aa9.33□□□□□ -0.92
CCDC144A-203ENST00000360495 A8MUN3 132 aa9.33□□□□□ -0.92
CCDC144A-203ENST00000360495 PLA2G2AP14555 144 aa9.33□□□□□ -0.92
CCDC144A-203ENST00000360495 LY6G6DO95868 133 aa9.32□□□□□ -0.92
CCDC144A-203ENST00000360495 MYO9AB2RTY4 2548 aa9.32□□□□□ -0.92
CCDC144A-203ENST00000360495 LY6G6CO95867 125 aa9.31□□□□□ -0.92
CCDC144A-203ENST00000360495 ELOF1P60002 83 aaKnown RBP9.31□□□□□ -0.92
CCDC144A-203ENST00000360495 ABCA2Q9BZC7 2435 aa9.31□□□□□ -0.92
CCDC144A-203ENST00000360495 SPINT4Q6UDR6 99 aa9.31□□□□□ -0.92
CCDC144A-203ENST00000360495 TRAV22A0A0B4J277 110 aa9.3□□□□□ -0.92
CCDC144A-203ENST00000360495 CDSNQ15517 529 aa9.3□□□□□ -0.92
CCDC144A-203ENST00000360495 MUC4Q99102 2169 aa9.3□□□□□ -0.92
CCDC144A-203ENST00000360495 FHL3Q13643 280 aa9.3□□□□□ -0.92
CCDC144A-203ENST00000360495 Q8NBF4 154 aa9.3□□□□□ -0.92
CCDC144A-203ENST00000360495 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
CCDC144A-203ENST00000360495 COL5A1P20908 1838 aaPredicted RBP9.29□□□□□ -0.92
CCDC144A-203ENST00000360495 LINC00336Q6ZUF6 198 aa9.29□□□□□ -0.92
CCDC144A-203ENST00000360495 IGLV5-52A0A0A0MRZ9 124 aa9.28□□□□□ -0.92
CCDC144A-203ENST00000360495 CCDC168Q8NDH2 2452 aa9.28□□□□□ -0.92
CCDC144A-203ENST00000360495 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.92
CCDC144A-203ENST00000360495 CD164Q04900 197 aa9.27□□□□□ -0.93
CCDC144A-203ENST00000360495 CYP4F30PQ9H0H9 118 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms