RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 CDKN2A-AS1Q9UH64 79 aa13.14□□□□□ -0.31
SNX11-201ENST00000359238 NOP10Q9NPE3 64 aaKnown RBP13.14□□□□□ -0.31
SNX11-201ENST00000359238 OR13C6PQ8NH95 151 aa13.12□□□□□ -0.31
SNX11-201ENST00000359238 Q9H8V8 135 aa13.11□□□□□ -0.31
SNX11-201ENST00000359238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.11□□□□□ -0.31
SNX11-201ENST00000359238 IGLV5-39A0A0G2JS06 123 aa13.11□□□□□ -0.31
SNX11-201ENST00000359238 IGKV2-29A2NJV5 120 aaPredicted RBP13.11□□□□□ -0.31
SNX11-201ENST00000359238 RS1O15537 224 aa13.11□□□□□ -0.31
SNX11-201ENST00000359238 IGHV3-38A0A0C4DH36 116 aa13.1□□□□□ -0.31
SNX11-201ENST00000359238 SOSTDC1Q6X4U4 206 aa13.1□□□□□ -0.31
SNX11-201ENST00000359238 WIPF1O43516 503 aa13.1□□□□□ -0.31
SNX11-201ENST00000359238 hADV29S1A0JD25 119 aa13.09□□□□□ -0.31
SNX11-201ENST00000359238 FAM218AQ96MZ4 157 aa13.09□□□□□ -0.31
SNX11-201ENST00000359238 RPL18AQ02543 176 aaKnown RBP13.08□□□□□ -0.31
SNX11-201ENST00000359238 MALP21145 153 aa13.08□□□□□ -0.32
SNX11-201ENST00000359238 PIK3CD-AS1Q5SR53 167 aa13.07□□□□□ -0.32
SNX11-201ENST00000359238 TMEM258P61165 79 aa13.06□□□□□ -0.32
SNX11-201ENST00000359238 KRTAP10-11P60412 298 aa13.06□□□□□ -0.32
SNX11-201ENST00000359238 COX6A2Q02221 97 aa13.06□□□□□ -0.32
SNX11-201ENST00000359238 ZNF625Q96I27 306 aaPredicted RBP13.06□□□□□ -0.32
SNX11-201ENST00000359238 A0A0U1RRA0 63 aa13.05□□□□□ -0.32
SNX11-201ENST00000359238 X6R8D5 127 aa13.05□□□□□ -0.32
SNX11-201ENST00000359238 DNAH3Q8TD57 4116 aa13.04□□□□□ -0.32
SNX11-201ENST00000359238 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
SNX11-201ENST00000359238 C16orf74Q96GX8 76 aa13.04□□□□□ -0.32
SNX11-201ENST00000359238 CYSTM1Q9H1C7 97 aa13.04□□□□□ -0.32
SNX11-201ENST00000359238 IGHV4-30-4P0DP06 118 aa13.04□□□□□ -0.32
SNX11-201ENST00000359238 DEFB135Q30KP9 77 aa13.04□□□□□ -0.32
SNX11-201ENST00000359238 DEFB4AO15263 64 aa13.03□□□□□ -0.32
SNX11-201ENST00000359238 Q6JHZ5 121 aa13.03□□□□□ -0.32
SNX11-201ENST00000359238 SERP2Q8N6R1 65 aa13.03□□□□□ -0.32
SNX11-201ENST00000359238 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.32
SNX11-201ENST00000359238 LOC100131303A0A0U1RQF7 123 aa13.02□□□□□ -0.32
SNX11-201ENST00000359238 RPL28P46779 137 aaKnown RBP13.02□□□□□ -0.32
SNX11-201ENST00000359238 OVOL2Q9BRP0 275 aa13.02□□□□□ -0.32
SNX11-201ENST00000359238 UPK3BQ9BT76 320 aa13.02□□□□□ -0.32
SNX11-201ENST00000359238 DNAL4O96015 105 aa13.02□□□□□ -0.33
SNX11-201ENST00000359238 LINC00242Q5T6M2 205 aa13.02□□□□□ -0.33
SNX11-201ENST00000359238 FAM19A3Q7Z5A8 133 aa13.02□□□□□ -0.33
SNX11-201ENST00000359238 Q9HAA7 133 aa13.02□□□□□ -0.33
SNX11-201ENST00000359238 NOTCH1P46531 2555 aa13.01□□□□□ -0.33
SNX11-201ENST00000359238 SMIM1B2RUZ4 78 aa13.01□□□□□ -0.33
SNX11-201ENST00000359238 DGAT2L7PQ6IED9 249 aa13.01□□□□□ -0.33
SNX11-201ENST00000359238 TRAV13-2A0A0B4J235 113 aa13□□□□□ -0.33
SNX11-201ENST00000359238 TRGV2A0A075B6R0 118 aa13□□□□□ -0.33
SNX11-201ENST00000359238 APOC4P55056 127 aa13□□□□□ -0.33
SNX11-201ENST00000359238 KIR2DL5BQ8NHK3 375 aa12.99□□□□□ -0.33
SNX11-201ENST00000359238 DEFB130BP0DP73 79 aa12.98□□□□□ -0.33
SNX11-201ENST00000359238 DEFB130AP0DP74 79 aa12.98□□□□□ -0.33
SNX11-201ENST00000359238 OBSCN-AS1Q96MR7 158 aa12.98□□□□□ -0.33
SNX11-201ENST00000359238 MDFIQ99750 246 aa12.97□□□□□ -0.33
SNX11-201ENST00000359238 IGKV3D-7A0A0C4DH55 119 aa12.97□□□□□ -0.33
SNX11-201ENST00000359238 K7EQD1 137 aa12.97□□□□□ -0.33
SNX11-201ENST00000359238 EGFEM1PQ0D2K5 195 aa12.97□□□□□ -0.33
SNX11-201ENST00000359238 TENM3Q9P273 2699 aa12.97□□□□□ -0.33
SNX11-201ENST00000359238 NTM-AS1Q6ZSK4 140 aa12.96□□□□□ -0.33
SNX11-201ENST00000359238 CRPP02741 224 aa12.96□□□□□ -0.34
SNX11-201ENST00000359238 NBEAL1Q6ZS30 2694 aa12.96□□□□□ -0.34
SNX11-201ENST00000359238 C14orf132Q9NPU4 83 aa12.95□□□□□ -0.34
SNX11-201ENST00000359238 LINC00846Q9NV44 126 aa12.95□□□□□ -0.34
SNX11-201ENST00000359238 FHL2Q14192 279 aa12.94□□□□□ -0.34
SNX11-201ENST00000359238 USP17L23D6RBM5 183 aa12.94□□□□□ -0.34
SNX11-201ENST00000359238 C9orf129Q5T035 196 aaKnown RBP12.94□□□□□ -0.34
SNX11-201ENST00000359238 LINC01561Q8N1V8 128 aa12.94□□□□□ -0.34
SNX11-201ENST00000359238 F5H768 121 aa12.93□□□□□ -0.34
SNX11-201ENST00000359238 A0A087WYN8 130 aa12.93□□□□□ -0.34
SNX11-201ENST00000359238 OXTP01178 125 aa12.93□□□□□ -0.34
SNX11-201ENST00000359238 LINC00337Q8N6G1 96 aa12.93□□□□□ -0.34
SNX11-201ENST00000359238 A0A087WVE0 104 aa12.91□□□□□ -0.34
SNX11-201ENST00000359238 H0YGX0 51 aa12.91□□□□□ -0.34
SNX11-201ENST00000359238 DSCR8Q96T75 97 aa12.91□□□□□ -0.34
SNX11-201ENST00000359238 MGAM2Q2M2H8 2515 aa12.9□□□□□ -0.34
SNX11-201ENST00000359238 IGKV2-28A0A075B6P5 120 aa12.9□□□□□ -0.34
SNX11-201ENST00000359238 TRGV4A0A0C4DH28 118 aa12.9□□□□□ -0.34
SNX11-201ENST00000359238 IGHV4-28A0A0C4DH34 117 aa12.9□□□□□ -0.34
SNX11-201ENST00000359238 IGKV2D-28P01615 120 aa12.9□□□□□ -0.34
SNX11-201ENST00000359238 PRB2P02812 416 aaPredicted RBP12.9□□□□□ -0.34
SNX11-201ENST00000359238 CELA1Q9UNI1 258 aa12.9□□□□□ -0.34
SNX11-201ENST00000359238 LINC00612Q8N6U2 182 aa12.9□□□□□ -0.34
SNX11-201ENST00000359238 SMIM11BQ8TCY0 68 aa12.9□□□□□ -0.34
SNX11-201ENST00000359238 RPL36AP83881 106 aaKnown RBP12.89□□□□□ -0.35
SNX11-201ENST00000359238 RPL36ALQ969Q0 106 aaKnown RBP12.89□□□□□ -0.35
SNX11-201ENST00000359238 SND1-IT1Q9HBX3 110 aa12.88□□□□□ -0.35
SNX11-201ENST00000359238 RETNQ9HD89 108 aa12.88□□□□□ -0.35
SNX11-201ENST00000359238 TRBV10-1A0A0K0K1A3 114 aa12.88□□□□□ -0.35
SNX11-201ENST00000359238 Q8NAQ8 132 aa12.88□□□□□ -0.35
SNX11-201ENST00000359238 Q5XG85 94 aa12.87□□□□□ -0.35
SNX11-201ENST00000359238 TRBV6-4A0A1B0GX49 114 aa12.87□□□□□ -0.35
SNX11-201ENST00000359238 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
SNX11-201ENST00000359238 C4orf26Q17RF5 130 aa12.86□□□□□ -0.35
SNX11-201ENST00000359238 MIR7-3HGQ8N6C7 128 aa12.86□□□□□ -0.35
SNX11-201ENST00000359238 CDC42SE2Q9NRR3 84 aa12.85□□□□□ -0.35
SNX11-201ENST00000359238 A0A096LPF7 62 aa12.84□□□□□ -0.35
SNX11-201ENST00000359238 NCR3O14931 201 aa12.84□□□□□ -0.35
SNX11-201ENST00000359238 MIFP14174 115 aa12.84□□□□□ -0.35
SNX11-201ENST00000359238 LECT2O14960 151 aa12.83□□□□□ -0.36
SNX11-201ENST00000359238 NDUFC2O95298 119 aa12.83□□□□□ -0.36
SNX11-201ENST00000359238 CCKP06307 115 aa12.82□□□□□ -0.36
SNX11-201ENST00000359238 S100A7L2Q5SY68 101 aa12.82□□□□□ -0.36
SNX11-201ENST00000359238 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms