RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 Q9UF83 564 aa15.78■□□□□ 0.12
POLR2J2-202ENST00000358438 IGLV5-39A0A0G2JS06 123 aa15.77■□□□□ 0.12
POLR2J2-202ENST00000358438 FAM19A5Q7Z5A7 132 aaPredicted RBP15.77■□□□□ 0.12
POLR2J2-202ENST00000358438 X6R8D5 127 aa15.76■□□□□ 0.11
POLR2J2-202ENST00000358438 LOC107984640A0A0U1RRK4 108 aa15.75■□□□□ 0.11
POLR2J2-202ENST00000358438 C22orf24Q9Y442 160 aa15.75■□□□□ 0.11
POLR2J2-202ENST00000358438 PKD1L1Q8TDX9 2849 aa15.75■□□□□ 0.11
POLR2J2-202ENST00000358438 TRGV2A0A075B6R0 118 aa15.74■□□□□ 0.11
POLR2J2-202ENST00000358438 IGHV4-30-4P0DP06 118 aa15.74■□□□□ 0.11
POLR2J2-202ENST00000358438 CDKN2A-AS1Q9UH64 79 aa15.74■□□□□ 0.11
POLR2J2-202ENST00000358438 NBEAL2Q6ZNJ1 2754 aa15.74■□□□□ 0.11
POLR2J2-202ENST00000358438 TMEM258P61165 79 aa15.74■□□□□ 0.11
POLR2J2-202ENST00000358438 DEFB135Q30KP9 77 aa15.74■□□□□ 0.11
POLR2J2-202ENST00000358438 RNASE13Q5GAN3 156 aaKnown RBP15.74■□□□□ 0.11
POLR2J2-202ENST00000358438 FAM19A3Q7Z5A8 133 aa15.73■□□□□ 0.11
POLR2J2-202ENST00000358438 RPL18AQ02543 176 aaKnown RBP15.72■□□□□ 0.11
POLR2J2-202ENST00000358438 Q9H8V8 135 aa15.72■□□□□ 0.11
POLR2J2-202ENST00000358438 KRTAP10-11P60412 298 aa15.71■□□□□ 0.11
POLR2J2-202ENST00000358438 KLK5Q9Y337 293 aaPredicted RBP15.71■□□□□ 0.11
POLR2J2-202ENST00000358438 MALP21145 153 aa15.71■□□□□ 0.1
POLR2J2-202ENST00000358438 EGFEM1PQ0D2K5 195 aa15.71■□□□□ 0.1
POLR2J2-202ENST00000358438 Q6JHZ5 121 aa15.71■□□□□ 0.1
POLR2J2-202ENST00000358438 K7EQD1 137 aa15.7■□□□□ 0.1
POLR2J2-202ENST00000358438 TRBV10-1A0A0K0K1A3 114 aa15.69■□□□□ 0.1
POLR2J2-202ENST00000358438 RPL28P46779 137 aaKnown RBP15.68■□□□□ 0.1
POLR2J2-202ENST00000358438 SOSTDC1Q6X4U4 206 aa15.68■□□□□ 0.1
POLR2J2-202ENST00000358438 ANK2Q01484 3957 aa15.67■□□□□ 0.1
POLR2J2-202ENST00000358438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.67■□□□□ 0.1
POLR2J2-202ENST00000358438 TRAV13-2A0A0B4J235 113 aa15.67■□□□□ 0.1
POLR2J2-202ENST00000358438 IGKV2-29A2NJV5 120 aaPredicted RBP15.67■□□□□ 0.1
POLR2J2-202ENST00000358438 SERP2Q8N6R1 65 aa15.67■□□□□ 0.1
POLR2J2-202ENST00000358438 LINC00612Q8N6U2 182 aa15.67■□□□□ 0.1
POLR2J2-202ENST00000358438 IGHV3-38A0A0C4DH36 116 aa15.65■□□□□ 0.1
POLR2J2-202ENST00000358438 hADV29S1A0JD25 119 aa15.65■□□□□ 0.1
POLR2J2-202ENST00000358438 DEFB130BP0DP73 79 aa15.65■□□□□ 0.1
POLR2J2-202ENST00000358438 DEFB130AP0DP74 79 aa15.65■□□□□ 0.1
POLR2J2-202ENST00000358438 RPL36AP83881 106 aaKnown RBP15.65■□□□□ 0.1
POLR2J2-202ENST00000358438 RPL36ALQ969Q0 106 aaKnown RBP15.65■□□□□ 0.1
POLR2J2-202ENST00000358438 FAM218AQ96MZ4 157 aa15.65■□□□□ 0.1
POLR2J2-202ENST00000358438 DNAL4O96015 105 aa15.64■□□□□ 0.09
POLR2J2-202ENST00000358438 ZNF625Q96I27 306 aaPredicted RBP15.64■□□□□ 0.09
POLR2J2-202ENST00000358438 TRGV4A0A0C4DH28 118 aa15.64■□□□□ 0.09
POLR2J2-202ENST00000358438 TRBV6-4A0A1B0GX49 114 aa15.64■□□□□ 0.09
POLR2J2-202ENST00000358438 OBSCN-AS1Q96MR7 158 aa15.63■□□□□ 0.09
POLR2J2-202ENST00000358438 DGAT2L7PQ6IED9 249 aa15.63■□□□□ 0.09
POLR2J2-202ENST00000358438 DPH3Q96FX2 82 aa15.63■□□□□ 0.09
POLR2J2-202ENST00000358438 SMIM1B2RUZ4 78 aa15.62■□□□□ 0.09
POLR2J2-202ENST00000358438 FHL2Q14192 279 aa15.62■□□□□ 0.09
POLR2J2-202ENST00000358438 UPK3BQ9BT76 320 aa15.62■□□□□ 0.09
POLR2J2-202ENST00000358438 CMYA5Q8N3K9 4069 aa15.61■□□□□ 0.09
POLR2J2-202ENST00000358438 IGHV4-28A0A0C4DH34 117 aa15.61■□□□□ 0.09
POLR2J2-202ENST00000358438 LYRM9A8MSI8 78 aa15.61■□□□□ 0.09
POLR2J2-202ENST00000358438 COX6A2Q02221 97 aa15.61■□□□□ 0.09
POLR2J2-202ENST00000358438 LINC00242Q5T6M2 205 aa15.61■□□□□ 0.09
POLR2J2-202ENST00000358438 MIFP14174 115 aa15.61■□□□□ 0.09
POLR2J2-202ENST00000358438 DEFB4AO15263 64 aa15.6■□□□□ 0.09
POLR2J2-202ENST00000358438 Q8NAQ8 132 aa15.59■□□□□ 0.09
POLR2J2-202ENST00000358438 H0YGX0 51 aa15.58■□□□□ 0.09
POLR2J2-202ENST00000358438 CRPP02741 224 aa15.58■□□□□ 0.09
POLR2J2-202ENST00000358438 KRTAP21-3Q3LHN1 58 aa15.58■□□□□ 0.09
POLR2J2-202ENST00000358438 LOC100131303A0A0U1RQF7 123 aa15.57■□□□□ 0.08
POLR2J2-202ENST00000358438 DNHD1Q96M86 4753 aa15.56■□□□□ 0.08
POLR2J2-202ENST00000358438 TRAV13-1A0A0B4J241 112 aa15.55■□□□□ 0.08
POLR2J2-202ENST00000358438 A0A0U1RRA0 63 aa15.54■□□□□ 0.08
POLR2J2-202ENST00000358438 NDUFC2-KCTD14E9PQ53 114 aa15.54■□□□□ 0.08
POLR2J2-202ENST00000358438 Q9HAA7 133 aa15.54■□□□□ 0.08
POLR2J2-202ENST00000358438 NTM-AS1Q6ZSK4 140 aa15.53■□□□□ 0.08
POLR2J2-202ENST00000358438 F5H768 121 aa15.53■□□□□ 0.08
POLR2J2-202ENST00000358438 USP17L23D6RBM5 183 aa15.52■□□□□ 0.08
POLR2J2-202ENST00000358438 CYSTM1Q9H1C7 97 aa15.52■□□□□ 0.08
POLR2J2-202ENST00000358438 CELA1Q9UNI1 258 aa15.52■□□□□ 0.07
POLR2J2-202ENST00000358438 LINC00846Q9NV44 126 aa15.51■□□□□ 0.07
POLR2J2-202ENST00000358438 DAD1P61803 113 aa15.5■□□□□ 0.07
POLR2J2-202ENST00000358438 S100A7L2Q5SY68 101 aa15.5■□□□□ 0.07
POLR2J2-202ENST00000358438 SPART-AS1P0CW21 52 aa15.5■□□□□ 0.07
POLR2J2-202ENST00000358438 C14orf132Q9NPU4 83 aa15.5■□□□□ 0.07
POLR2J2-202ENST00000358438 PRO0255Q9UI72 69 aa15.5■□□□□ 0.07
POLR2J2-202ENST00000358438 NOTCH1P46531 2555 aa15.5■□□□□ 0.07
POLR2J2-202ENST00000358438 IGKV3D-7A0A0C4DH55 119 aa15.49■□□□□ 0.07
POLR2J2-202ENST00000358438 ATP5EP2Q5VTU8 51 aa15.49■□□□□ 0.07
POLR2J2-202ENST00000358438 LINC01561Q8N1V8 128 aa15.49■□□□□ 0.07
POLR2J2-202ENST00000358438 LINC00337Q8N6G1 96 aa15.48■□□□□ 0.07
POLR2J2-202ENST00000358438 NDUFC2O95298 119 aa15.47■□□□□ 0.07
POLR2J2-202ENST00000358438 RETNQ9HD89 108 aa15.47■□□□□ 0.07
POLR2J2-202ENST00000358438 DNAH3Q8TD57 4116 aa15.47■□□□□ 0.07
POLR2J2-202ENST00000358438 GYPEP15421 78 aa15.47■□□□□ 0.07
POLR2J2-202ENST00000358438 A0A087WYN8 130 aa15.46■□□□□ 0.07
POLR2J2-202ENST00000358438 SMIM11BQ8TCY0 68 aa15.46■□□□□ 0.07
POLR2J2-202ENST00000358438 SND1-IT1Q9HBX3 110 aa15.46■□□□□ 0.07
POLR2J2-202ENST00000358438 NBEAL1Q6ZS30 2694 aa15.45■□□□□ 0.06
POLR2J2-202ENST00000358438 IGKV2-28A0A075B6P5 120 aa15.45■□□□□ 0.06
POLR2J2-202ENST00000358438 IGKV2D-28P01615 120 aa15.45■□□□□ 0.06
POLR2J2-202ENST00000358438 TMEM243Q9BU79 118 aa15.45■□□□□ 0.06
POLR2J2-202ENST00000358438 CDC42SE2Q9NRR3 84 aa15.44■□□□□ 0.06
POLR2J2-202ENST00000358438 PAX4O43316 350 aa15.44■□□□□ 0.06
POLR2J2-202ENST00000358438 TRBV6-8A0A0A6YYG3 113 aa15.42■□□□□ 0.06
POLR2J2-202ENST00000358438 OXTP01178 125 aa15.42■□□□□ 0.06
POLR2J2-202ENST00000358438 CCKP06307 115 aa15.42■□□□□ 0.06
POLR2J2-202ENST00000358438 C9orf129Q5T035 196 aaKnown RBP15.42■□□□□ 0.06
POLR2J2-202ENST00000358438 MIR7-3HGQ8N6C7 128 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms