RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 C4orf3Q8WVX3 66 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 CHCHD7Q9BUK0 85 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 SMIM1B2RUZ4 78 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 LINC00337Q8N6G1 96 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 F8WEM9 126 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 FHL2Q14192 279 aa7.16□□□□□ -1.26
RNF40-202ENST00000357890 ZANQ9Y493 2812 aa7.15□□□□□ -1.26
RNF40-202ENST00000357890 DEFB121Q5J5C9 76 aa7.15□□□□□ -1.26
RNF40-202ENST00000357890 PF4P02776 101 aa7.15□□□□□ -1.26
RNF40-202ENST00000357890 JMJD7-PLA2G4BH0Y9G9 81 aa7.15□□□□□ -1.27
RNF40-202ENST00000357890 K7EQD1 137 aa7.15□□□□□ -1.27
RNF40-202ENST00000357890 DEFB114Q30KQ6 69 aa7.14□□□□□ -1.27
RNF40-202ENST00000357890 FAM222AQ5U5X8 452 aa7.14□□□□□ -1.27
RNF40-202ENST00000357890 IGLV10-54A0A075B6I4 117 aa7.14□□□□□ -1.27
RNF40-202ENST00000357890 CCL18P55774 89 aa7.14□□□□□ -1.27
RNF40-202ENST00000357890 PRR3P79522 188 aaKnown RBP7.14□□□□□ -1.27
RNF40-202ENST00000357890 V9GYY9 64 aa7.14□□□□□ -1.27
RNF40-202ENST00000357890 RPL28P46779 137 aaKnown RBP7.14□□□□□ -1.27
RNF40-202ENST00000357890 RMI2Q96E14 147 aa7.14□□□□□ -1.27
RNF40-202ENST00000357890 CELSR2Q9HCU4 2923 aa7.13□□□□□ -1.27
RNF40-202ENST00000357890 CCL24O00175 119 aa7.13□□□□□ -1.27
RNF40-202ENST00000357890 C9orf129Q5T035 196 aaKnown RBP7.13□□□□□ -1.27
RNF40-202ENST00000357890 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.13□□□□□ -1.27
RNF40-202ENST00000357890 C1orf195Q5TG92 126 aa7.12□□□□□ -1.27
RNF40-202ENST00000357890 LINC01561Q8N1V8 128 aa7.12□□□□□ -1.27
RNF40-202ENST00000357890 TMEM256-PLSCR3K7ERE1 68 aa7.12□□□□□ -1.27
RNF40-202ENST00000357890 CMC4P56277 68 aaPredicted RBP7.12□□□□□ -1.27
RNF40-202ENST00000357890 CHD6Q8TD26 2715 aa7.12□□□□□ -1.27
RNF40-202ENST00000357890 LRCOL1A6NCL2 159 aa7.11□□□□□ -1.27
RNF40-202ENST00000357890 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
RNF40-202ENST00000357890 SS18Q15532 418 aa7.11□□□□□ -1.27
RNF40-202ENST00000357890 LINC00336Q6ZUF6 198 aa7.11□□□□□ -1.27
RNF40-202ENST00000357890 PRO0628Q9UI54 55 aa7.11□□□□□ -1.27
RNF40-202ENST00000357890 IGSF10Q6WRI0 2623 aa7.1□□□□□ -1.27
RNF40-202ENST00000357890 NDUFC2-KCTD14E9PQ53 114 aa7.1□□□□□ -1.27
RNF40-202ENST00000357890 CCKP06307 115 aa7.1□□□□□ -1.27
RNF40-202ENST00000357890 HTN3P15516 51 aa7.1□□□□□ -1.27
RNF40-202ENST00000357890 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
RNF40-202ENST00000357890 CFAP46Q8IYW2 2715 aa7.1□□□□□ -1.27
RNF40-202ENST00000357890 TRBV10-1A0A0K0K1A3 114 aa7.1□□□□□ -1.27
RNF40-202ENST00000357890 C6orf99Q4VX62 202 aa7.1□□□□□ -1.27
RNF40-202ENST00000357890 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.27
RNF40-202ENST00000357890 KRTAP10-9P60411 292 aa7.09□□□□□ -1.27
RNF40-202ENST00000357890 ATRQ13535 2644 aa7.09□□□□□ -1.27
RNF40-202ENST00000357890 LOC100131303A0A0U1RQF7 123 aa7.09□□□□□ -1.27
RNF40-202ENST00000357890 ODF3L2Q3SX64 289 aa7.09□□□□□ -1.27
RNF40-202ENST00000357890 TEX15Q9BXT5 2789 aa7.09□□□□□ -1.28
RNF40-202ENST00000357890 IGHV4-28A0A0C4DH34 117 aa7.08□□□□□ -1.28
RNF40-202ENST00000357890 WFDC10AQ9H1F0 79 aa7.08□□□□□ -1.28
RNF40-202ENST00000357890 A0A096LNT2 108 aa7.08□□□□□ -1.28
RNF40-202ENST00000357890 FSHBP01225 129 aa7.08□□□□□ -1.28
RNF40-202ENST00000357890 ATP5EP2Q5VTU8 51 aa7.08□□□□□ -1.28
RNF40-202ENST00000357890 C11orf72Q8NBR9 251 aa7.08□□□□□ -1.28
RNF40-202ENST00000357890 BEAN1Q3B7T3 259 aa7.07□□□□□ -1.28
RNF40-202ENST00000357890 C1orf158Q8N1D5 194 aa7.07□□□□□ -1.28
RNF40-202ENST00000357890 HECTD1Q9ULT8 2610 aa7.07□□□□□ -1.28
RNF40-202ENST00000357890 DNAJC9-AS1A6NH13 148 aa7.07□□□□□ -1.28
RNF40-202ENST00000357890 A8MTW9 85 aa7.07□□□□□ -1.28
RNF40-202ENST00000357890 CDC42SE2Q9NRR3 84 aa7.07□□□□□ -1.28
RNF40-202ENST00000357890 ESM1Q9NQ30 184 aa7.06□□□□□ -1.28
RNF40-202ENST00000357890 OXTP01178 125 aa7.06□□□□□ -1.28
RNF40-202ENST00000357890 FLNAP21333 2647 aaKnown RBP7.05□□□□□ -1.28
RNF40-202ENST00000357890 TRAV7A0A075B6U4 112 aa7.05□□□□□ -1.28
RNF40-202ENST00000357890 ANGP03950 147 aaKnown RBP7.05□□□□□ -1.28
RNF40-202ENST00000357890 PRR4Q16378 134 aa7.05□□□□□ -1.28
RNF40-202ENST00000357890 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
RNF40-202ENST00000357890 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
RNF40-202ENST00000357890 UTP20O75691 2785 aaKnown RBP7.05□□□□□ -1.28
RNF40-202ENST00000357890 IGLV5-39A0A0G2JS06 123 aa7.05□□□□□ -1.28
RNF40-202ENST00000357890 IBA57-AS1B1ANH7 110 aa7.05□□□□□ -1.28
RNF40-202ENST00000357890 DEFB105AQ8NG35 78 aa7.05□□□□□ -1.28
RNF40-202ENST00000357890 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
RNF40-202ENST00000357890 Q8N3U1 123 aa7.04□□□□□ -1.28
RNF40-202ENST00000357890 TRBV7-6A0A0J9YX20 115 aa7.04□□□□□ -1.28
RNF40-202ENST00000357890 Q6ZQY7 126 aa7.04□□□□□ -1.28
RNF40-202ENST00000357890 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
RNF40-202ENST00000357890 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
RNF40-202ENST00000357890 LINC00269Q8N2A0 174 aa7.04□□□□□ -1.28
RNF40-202ENST00000357890 F8P00451 2351 aa7.03□□□□□ -1.28
RNF40-202ENST00000357890 GYPEP15421 78 aa7.03□□□□□ -1.28
RNF40-202ENST00000357890 MIFP14174 115 aa7.03□□□□□ -1.28
RNF40-202ENST00000357890 FUSP35637 526 aaKnown RBP eCLIP7.03□□□□□ -1.28
RNF40-202ENST00000357890 SEC61GP60059 68 aa7.03□□□□□ -1.28
RNF40-202ENST00000357890 C9orf116Q5BN46 136 aaPredicted RBP7.03□□□□□ -1.28
RNF40-202ENST00000357890 Q8N814 137 aa7.03□□□□□ -1.28
RNF40-202ENST00000357890 IGLV4-60A0A075B6I1 120 aa7.02□□□□□ -1.29
RNF40-202ENST00000357890 TRAV10A0A0B4J240 114 aa7.02□□□□□ -1.29
RNF40-202ENST00000357890 TRBV6-4A0A1B0GX49 114 aa7.02□□□□□ -1.29
RNF40-202ENST00000357890 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
RNF40-202ENST00000357890 TRBV6-8A0A0A6YYG3 113 aa7.01□□□□□ -1.29
RNF40-202ENST00000357890 Q8N9L7 120 aa7.01□□□□□ -1.29
RNF40-202ENST00000357890 NREPQ16612 68 aa7.01□□□□□ -1.29
RNF40-202ENST00000357890 Q5XG85 94 aa7.01□□□□□ -1.29
RNF40-202ENST00000357890 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
RNF40-202ENST00000357890 DEFB4AO15263 64 aa7□□□□□ -1.29
RNF40-202ENST00000357890 LINC01600Q96MT4 127 aa7□□□□□ -1.29
RNF40-202ENST00000357890 NF1P21359 2839 aa7□□□□□ -1.29
RNF40-202ENST00000357890 WIPF1O43516 503 aa7□□□□□ -1.29
RNF40-202ENST00000357890 LINC01547P58512 204 aaPredicted RBP7□□□□□ -1.29
RNF40-202ENST00000357890 ITPR3Q14573 2671 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms