RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 HIVEP3Q5T1R4 2406 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 MAPKAPK5-AS1Q8N8E1 139 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 POLR2KP53803 58 aaKnown RBP3.97□□□□□ -1.77
PTPRD-202ENST00000356435 CELA1Q9UNI1 258 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 TECTAO75443 2155 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 ADAMTS20P59510 1910 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 ABCA2Q9BZC7 2435 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 FHL2Q14192 279 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 Q6ZS46 218 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 C11orf21Q9P2W6 132 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 CHD8Q9HCK8 2581 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 PCDH15Q96QU1 1955 aa3.97□□□□□ -1.77
PTPRD-202ENST00000356435 FAM229AH3BQW9 127 aa3.96□□□□□ -1.77
PTPRD-202ENST00000356435 CRIP2P52943 208 aaPredicted RBP3.96□□□□□ -1.78
PTPRD-202ENST00000356435 MDFIQ99750 246 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 NCOR2Q9Y618 2525 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 LINC00242Q5T6M2 205 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 LINC00208Q96KT6 92 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 TRBV7-7A0A0K0K1E9 115 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 KRTAP10-9P60411 292 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 C9orf116Q5BN46 136 aaPredicted RBP3.96□□□□□ -1.78
PTPRD-202ENST00000356435 AVPP01185 164 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 COX6A2Q02221 97 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 LYPD5Q6UWN5 251 aa3.96□□□□□ -1.78
PTPRD-202ENST00000356435 SMIM1B2RUZ4 78 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 POM121L12Q8N7R1 296 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 MYO9AB2RTY4 2548 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 FHL3Q13643 280 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 PRRC2AP48634 2157 aaKnown RBP3.95□□□□□ -1.78
PTPRD-202ENST00000356435 KLK9Q2XQG4 91 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 LINC01561Q8N1V8 128 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 PRM2P04554 102 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 EDN2P20800 178 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 LINC01547P58512 204 aaPredicted RBP3.95□□□□□ -1.78
PTPRD-202ENST00000356435 A0A087WSZ3 146 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 COX7CP15954 63 aa3.95□□□□□ -1.78
PTPRD-202ENST00000356435 A0A1B0GUV1 79 aa3.94□□□□□ -1.78
PTPRD-202ENST00000356435 HCG22E2RYF7 251 aa3.94□□□□□ -1.78
PTPRD-202ENST00000356435 SMCPP49901 116 aaPredicted RBP3.94□□□□□ -1.78
PTPRD-202ENST00000356435 H0Y9P7 68 aa3.94□□□□□ -1.78
PTPRD-202ENST00000356435 C7orf65Q6ZTY9 151 aa3.94□□□□□ -1.78
PTPRD-202ENST00000356435 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
PTPRD-202ENST00000356435 PCOTHQ58A44 107 aa3.94□□□□□ -1.78
PTPRD-202ENST00000356435 LRRK2Q5S007 2527 aa3.94□□□□□ -1.78
PTPRD-202ENST00000356435 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
PTPRD-202ENST00000356435 J3QL48 77 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 PLA2G1BP04054 148 aaKnown RBP3.93□□□□□ -1.78
PTPRD-202ENST00000356435 RPS28P62857 69 aaKnown RBP3.93□□□□□ -1.78
PTPRD-202ENST00000356435 PRR14LQ5THK1 2151 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 A0A087WYN8 130 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 IGIPA6NJ69 53 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 IGLV4-60A0A075B6I1 120 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 PRLHP81277 87 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 BEAN1Q3B7T3 259 aa3.93□□□□□ -1.78
PTPRD-202ENST00000356435 CDSNQ15517 529 aa3.92□□□□□ -1.78
PTPRD-202ENST00000356435 DSCAMO60469 2012 aa3.92□□□□□ -1.78
PTPRD-202ENST00000356435 BPTFQ12830 3046 aa3.92□□□□□ -1.78
PTPRD-202ENST00000356435 SMIM26A0A096LP01 95 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 LINC00575Q6W349 94 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 SPACA4Q8TDM5 124 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 PTPRBP23467 1997 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 BCE1O60756 84 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 JMJD1CQ15652 2540 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 LINC00694P0DN24 101 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 AMELXQ99217 191 aa3.91□□□□□ -1.78
PTPRD-202ENST00000356435 PRO0628Q9UI54 55 aa3.9□□□□□ -1.78
PTPRD-202ENST00000356435 C1orf195Q5TG92 126 aa3.9□□□□□ -1.78
PTPRD-202ENST00000356435 TP53AIP1Q9HCN2 124 aa3.9□□□□□ -1.78
PTPRD-202ENST00000356435 Q6ZRU5 148 aa3.9□□□□□ -1.79
PTPRD-202ENST00000356435 C22orf24Q9Y442 160 aa3.9□□□□□ -1.79
PTPRD-202ENST00000356435 PRR3P79522 188 aaKnown RBP3.9□□□□□ -1.79
PTPRD-202ENST00000356435 Q8NBF4 154 aa3.9□□□□□ -1.79
PTPRD-202ENST00000356435 CRYGAP11844 174 aa3.9□□□□□ -1.79
PTPRD-202ENST00000356435 SMCR5Q8TEV8 140 aa3.9□□□□□ -1.79
PTPRD-202ENST00000356435 DSCAML1Q8TD84 2053 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 C16orf90A8MZG2 172 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 RTL8CO15255 209 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 MOBPQ13875 183 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 Q8N3U1 123 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 Q6ZRP5 223 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
PTPRD-202ENST00000356435 A0A1B0GW54 56 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 PTPRSQ13332 1948 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 DEFB116Q30KQ4 102 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 ATP11AUNQ6ZP68 121 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 IGF2RP11717 2491 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 H3BNG1 76 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 COX6B2Q6YFQ2 88 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 WWC2-AS2Q96NR7 200 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 KIF25-AS1Q9Y6Z4 181 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 ZFYVE26Q68DK2 2539 aa3.88□□□□□ -1.79
PTPRD-202ENST00000356435 CXCL6P80162 114 aa3.87□□□□□ -1.79
PTPRD-202ENST00000356435 NBDYA0A0U1RRE5 68 aa3.87□□□□□ -1.79
PTPRD-202ENST00000356435 TSPEAR-AS2P59090 65 aa3.87□□□□□ -1.79
PTPRD-202ENST00000356435 TMEM254Q8TBM7 123 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms