RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 UBE2D1P51668 147 aa6.49□□□□□ -1.37
CAPN3-204ENST00000356316 PAPPA-AS1Q5QFB9 102 aa6.49□□□□□ -1.37
CAPN3-204ENST00000356316 C2orf82Q6UX34 121 aa6.49□□□□□ -1.37
CAPN3-204ENST00000356316 CTDSP1Q9GZU7 261 aa6.49□□□□□ -1.37
CAPN3-204ENST00000356316 TOMM7Q9P0U1 55 aa6.49□□□□□ -1.37
CAPN3-204ENST00000356316 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
CAPN3-204ENST00000356316 NPSP0C0P6 89 aa6.48□□□□□ -1.37
CAPN3-204ENST00000356316 SEC11AP67812 179 aa6.48□□□□□ -1.37
CAPN3-204ENST00000356316 PRR26Q8N8Z3 221 aa6.48□□□□□ -1.37
CAPN3-204ENST00000356316 ALKBH7Q9BT30 221 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-204ENST00000356316 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
CAPN3-204ENST00000356316 AMELXQ99217 191 aa6.47□□□□□ -1.37
CAPN3-204ENST00000356316 GEMIN7Q9H840 131 aaKnown RBP6.47□□□□□ -1.37
CAPN3-204ENST00000356316 NXT2Q9NPJ8 142 aaKnown RBP6.47□□□□□ -1.37
CAPN3-204ENST00000356316 HERVK_113P63121 156 aa6.46□□□□□ -1.38
CAPN3-204ENST00000356316 LBHQ53QV2 105 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-204ENST00000356316 KRTAP11-1Q8IUC1 163 aa6.46□□□□□ -1.38
CAPN3-204ENST00000356316 IGLV1-50A0A075B6I6 118 aa6.45□□□□□ -1.38
CAPN3-204ENST00000356316 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
CAPN3-204ENST00000356316 C9orf129Q5T035 196 aaKnown RBP6.45□□□□□ -1.38
CAPN3-204ENST00000356316 Q8IZM0 81 aa6.45□□□□□ -1.38
CAPN3-204ENST00000356316 RPL13AP40429 203 aaKnown RBP6.44□□□□□ -1.38
CAPN3-204ENST00000356316 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
CAPN3-204ENST00000356316 LINC00173Q6ZV60 143 aa6.44□□□□□ -1.38
CAPN3-204ENST00000356316 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
CAPN3-204ENST00000356316 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
CAPN3-204ENST00000356316 LINC00469Q8N7U9 141 aa6.44□□□□□ -1.38
CAPN3-204ENST00000356316 F8VRH5 84 aa6.43□□□□□ -1.38
CAPN3-204ENST00000356316 NUPR1O60356 82 aa6.43□□□□□ -1.38
CAPN3-204ENST00000356316 SCGB3A1Q96QR1 104 aa6.43□□□□□ -1.38
CAPN3-204ENST00000356316 TIMM17AQ99595 171 aa6.43□□□□□ -1.38
CAPN3-204ENST00000356316 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
CAPN3-204ENST00000356316 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
CAPN3-204ENST00000356316 C22orf24Q9Y442 160 aa6.43□□□□□ -1.38
CAPN3-204ENST00000356316 ZNF861PO60384 105 aa6.42□□□□□ -1.38
CAPN3-204ENST00000356316 ERASQ7Z444 233 aa6.42□□□□□ -1.38
CAPN3-204ENST00000356316 TOMM6Q96B49 74 aa6.42□□□□□ -1.38
CAPN3-204ENST00000356316 LINC01549A6NIU2 74 aa6.41□□□□□ -1.38
CAPN3-204ENST00000356316 CXCL5P42830 114 aa6.41□□□□□ -1.38
CAPN3-204ENST00000356316 KIAA1644Q3SXP7 199 aa6.41□□□□□ -1.38
CAPN3-204ENST00000356316 CARHSP1Q9Y2V2 147 aaKnown RBP6.41□□□□□ -1.38
CAPN3-204ENST00000356316 KRTAP1-4P0C5Y4 121 aa6.4□□□□□ -1.38
CAPN3-204ENST00000356316 S100PP25815 95 aa6.4□□□□□ -1.38
CAPN3-204ENST00000356316 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.38
CAPN3-204ENST00000356316 TRAV9-1A0A075B6T8 112 aa6.39□□□□□ -1.39
CAPN3-204ENST00000356316 TINCRA0A1B0GVN0 87 aa6.39□□□□□ -1.39
CAPN3-204ENST00000356316 RPL28P46779 137 aaKnown RBP6.39□□□□□ -1.39
CAPN3-204ENST00000356316 PRR4Q16378 134 aa6.39□□□□□ -1.39
CAPN3-204ENST00000356316 PDZD11Q5EBL8 140 aa6.39□□□□□ -1.39
CAPN3-204ENST00000356316 COX7B2Q8TF08 81 aa6.39□□□□□ -1.39
CAPN3-204ENST00000356316 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
CAPN3-204ENST00000356316 RAB5BP61020 215 aa6.38□□□□□ -1.39
CAPN3-204ENST00000356316 CLLU1Q5K131 121 aa6.38□□□□□ -1.39
CAPN3-204ENST00000356316 SMCO4Q9NRQ5 59 aa6.38□□□□□ -1.39
CAPN3-204ENST00000356316 BCE1O60756 84 aa6.37□□□□□ -1.39
CAPN3-204ENST00000356316 ADCYAP1P18509 176 aa6.37□□□□□ -1.39
CAPN3-204ENST00000356316 PMVKQ15126 192 aa6.37□□□□□ -1.39
CAPN3-204ENST00000356316 UQCC3Q6UW78 93 aa6.37□□□□□ -1.39
CAPN3-204ENST00000356316 GNB1LQ9BYB4 327 aa6.37□□□□□ -1.39
CAPN3-204ENST00000356316 CST9LQ9H4G1 147 aa6.37□□□□□ -1.39
CAPN3-204ENST00000356316 LPAP08519 4548 aa6.37□□□□□ -1.39
CAPN3-204ENST00000356316 TMEM218A2RU14 115 aa6.36□□□□□ -1.39
CAPN3-204ENST00000356316 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
CAPN3-204ENST00000356316 SMIM1B2RUZ4 78 aa6.36□□□□□ -1.39
CAPN3-204ENST00000356316 H3BRM9 83 aa6.36□□□□□ -1.39
CAPN3-204ENST00000356316 COX19Q49B96 90 aa6.36□□□□□ -1.39
CAPN3-204ENST00000356316 FA2HQ7L5A8 372 aa6.36□□□□□ -1.39
CAPN3-204ENST00000356316 NKAPP1Q8N9T2 125 aa6.36□□□□□ -1.39
CAPN3-204ENST00000356316 ATP5LO75964 103 aa6.35□□□□□ -1.39
CAPN3-204ENST00000356316 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
CAPN3-204ENST00000356316 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
CAPN3-204ENST00000356316 LINC00167Q96N53 147 aa6.35□□□□□ -1.39
CAPN3-204ENST00000356316 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 TSPAN13O95857 204 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 CRYGAP11844 174 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 NDUFA6P56556 154 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 LINC00310P59036 64 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 FABP9Q0Z7S8 132 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 SEC11CQ9BY50 192 aa6.34□□□□□ -1.39
CAPN3-204ENST00000356316 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
CAPN3-204ENST00000356316 UBE2AP49459 152 aa6.33□□□□□ -1.4
CAPN3-204ENST00000356316 PFN2P35080 140 aa6.32□□□□□ -1.4
CAPN3-204ENST00000356316 IGLV5-37A0A075B6J1 123 aa6.31□□□□□ -1.4
CAPN3-204ENST00000356316 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
CAPN3-204ENST00000356316 RPS10P5Q9NQ39 176 aa6.3□□□□□ -1.4
CAPN3-204ENST00000356316 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
CAPN3-204ENST00000356316 A0A087X002 238 aa6.29□□□□□ -1.4
CAPN3-204ENST00000356316 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
CAPN3-204ENST00000356316 LINC00614P0C842 121 aa6.29□□□□□ -1.4
CAPN3-204ENST00000356316 COX17Q14061 63 aa6.29□□□□□ -1.4
CAPN3-204ENST00000356316 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
CAPN3-204ENST00000356316 IGLC3P0DOY3 106 aa6.28□□□□□ -1.4
CAPN3-204ENST00000356316 RHEBQ15382 184 aa6.28□□□□□ -1.4
CAPN3-204ENST00000356316 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
CAPN3-204ENST00000356316 ERG28Q9UKR5 140 aa6.28□□□□□ -1.4
CAPN3-204ENST00000356316 TRAPPC1Q9Y5R8 145 aa6.28□□□□□ -1.4
CAPN3-204ENST00000356316 A0A0U1RQV1 116 aa6.27□□□□□ -1.41
CAPN3-204ENST00000356316 HBDP02042 147 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms