RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 GHRHP01286 108 aa10.93□□□□□ -0.66
STRN3-201ENST00000355683 LST1O00453 97 aa10.93□□□□□ -0.66
STRN3-201ENST00000355683 CMC4P56277 68 aaPredicted RBP10.93□□□□□ -0.66
STRN3-201ENST00000355683 TRBV6-5A0A0K0K1A5 114 aa10.92□□□□□ -0.66
STRN3-201ENST00000355683 CHCHD7Q9BUK0 85 aa10.92□□□□□ -0.66
STRN3-201ENST00000355683 IGKV2D-24A0A075B6R9 120 aa10.92□□□□□ -0.66
STRN3-201ENST00000355683 TIRAPP58753 221 aa10.92□□□□□ -0.66
STRN3-201ENST00000355683 SPANXCQ9NY87 97 aa10.92□□□□□ -0.66
STRN3-201ENST00000355683 APCP25054 2843 aa10.91□□□□□ -0.66
STRN3-201ENST00000355683 C1orf43Q9BWL3 253 aa10.91□□□□□ -0.66
STRN3-201ENST00000355683 A8MTW9 85 aa10.91□□□□□ -0.66
STRN3-201ENST00000355683 ENHOQ6UWT2 76 aa10.9□□□□□ -0.66
STRN3-201ENST00000355683 NKAPP1Q8N9T2 125 aa10.9□□□□□ -0.66
STRN3-201ENST00000355683 Q8N2B8 174 aa10.9□□□□□ -0.67
STRN3-201ENST00000355683 Q8N3U1 123 aa10.9□□□□□ -0.67
STRN3-201ENST00000355683 C16orf74Q96GX8 76 aa10.9□□□□□ -0.67
STRN3-201ENST00000355683 NDUFA1O15239 70 aa10.88□□□□□ -0.67
STRN3-201ENST00000355683 SPAG11BQ08648 103 aa10.88□□□□□ -0.67
STRN3-201ENST00000355683 CAMK2N2Q96S95 79 aa10.88□□□□□ -0.67
STRN3-201ENST00000355683 J3KT08 172 aa10.88□□□□□ -0.67
STRN3-201ENST00000355683 C6orf99Q4VX62 202 aa10.88□□□□□ -0.67
STRN3-201ENST00000355683 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.88□□□□□ -0.67
STRN3-201ENST00000355683 NHLRC4P0CG21 123 aaPredicted RBP10.86□□□□□ -0.67
STRN3-201ENST00000355683 MRPS36P82909 103 aaKnown RBP10.86□□□□□ -0.67
STRN3-201ENST00000355683 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
STRN3-201ENST00000355683 SMIM11BQ8TCY0 68 aa10.86□□□□□ -0.67
STRN3-201ENST00000355683 OXLD1Q5BKU9 147 aa10.85□□□□□ -0.67
STRN3-201ENST00000355683 UQCRQO14949 82 aa10.85□□□□□ -0.67
STRN3-201ENST00000355683 TRBV6-8A0A0A6YYG3 113 aa10.84□□□□□ -0.67
STRN3-201ENST00000355683 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
STRN3-201ENST00000355683 TRBV10-1A0A0K0K1A3 114 aa10.84□□□□□ -0.67
STRN3-201ENST00000355683 SMIM1B2RUZ4 78 aa10.84□□□□□ -0.67
STRN3-201ENST00000355683 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
STRN3-201ENST00000355683 RETNQ9HD89 108 aa10.83□□□□□ -0.68
STRN3-201ENST00000355683 CDC42SE2Q9NRR3 84 aa10.83□□□□□ -0.68
STRN3-201ENST00000355683 CXCL5P42830 114 aa10.83□□□□□ -0.68
STRN3-201ENST00000355683 ODF3Q96PU9 254 aa10.83□□□□□ -0.68
STRN3-201ENST00000355683 SNURFQ9Y675 71 aa10.83□□□□□ -0.68
STRN3-201ENST00000355683 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
STRN3-201ENST00000355683 C3orf22Q8N5N4 141 aa10.82□□□□□ -0.68
STRN3-201ENST00000355683 PPDPFQ9H3Y8 114 aa10.82□□□□□ -0.68
STRN3-201ENST00000355683 LOC107984640A0A0U1RRK4 108 aa10.82□□□□□ -0.68
STRN3-201ENST00000355683 PSCAO43653 123 aa10.82□□□□□ -0.68
STRN3-201ENST00000355683 CCL18P55774 89 aa10.82□□□□□ -0.68
STRN3-201ENST00000355683 PRO0255Q9UI72 69 aa10.82□□□□□ -0.68
STRN3-201ENST00000355683 USP17L23D6RBM5 183 aa10.81□□□□□ -0.68
STRN3-201ENST00000355683 F8WEM9 126 aa10.81□□□□□ -0.68
STRN3-201ENST00000355683 CHCHD10Q8WYQ3 142 aaPredicted RBP10.81□□□□□ -0.68
STRN3-201ENST00000355683 FAM19A4Q96LR4 140 aa10.8□□□□□ -0.68
STRN3-201ENST00000355683 SPANXDQ9BXN6 97 aa10.8□□□□□ -0.68
STRN3-201ENST00000355683 REG3AQ06141 175 aa10.8□□□□□ -0.68
STRN3-201ENST00000355683 JMJD7-PLA2G4BH0Y9G9 81 aa10.79□□□□□ -0.68
STRN3-201ENST00000355683 MPLKIPQ8TAP9 179 aa10.79□□□□□ -0.68
STRN3-201ENST00000355683 NREPQ16612 68 aa10.79□□□□□ -0.68
STRN3-201ENST00000355683 C6orf223Q8N319 242 aa10.79□□□□□ -0.68
STRN3-201ENST00000355683 A0A087WYN8 130 aa10.78□□□□□ -0.68
STRN3-201ENST00000355683 UBE2BP63146 152 aa10.78□□□□□ -0.68
STRN3-201ENST00000355683 C11orf72Q8NBR9 251 aa10.78□□□□□ -0.68
STRN3-201ENST00000355683 TMEM256-PLSCR3K7ERE1 68 aa10.78□□□□□ -0.68
STRN3-201ENST00000355683 AMELXQ99217 191 aa10.78□□□□□ -0.68
STRN3-201ENST00000355683 M0QXV9 152 aa10.77□□□□□ -0.68
STRN3-201ENST00000355683 SOSTDC1Q6X4U4 206 aa10.77□□□□□ -0.68
STRN3-201ENST00000355683 Q6ZQY7 126 aa10.77□□□□□ -0.68
STRN3-201ENST00000355683 HILS1P60008 231 aa10.76□□□□□ -0.69
STRN3-201ENST00000355683 A0A096LNI7 61 aa10.76□□□□□ -0.69
STRN3-201ENST00000355683 LINC00959A0A1B0GUT2 108 aa10.76□□□□□ -0.69
STRN3-201ENST00000355683 PDZD2O15018 2839 aa10.76□□□□□ -0.69
STRN3-201ENST00000355683 A0A0U1RQV1 116 aa10.76□□□□□ -0.69
STRN3-201ENST00000355683 BRI3O95415 125 aa10.75□□□□□ -0.69
STRN3-201ENST00000355683 SPART-AS1P0CW21 52 aa10.75□□□□□ -0.69
STRN3-201ENST00000355683 APOC4P55056 127 aa10.75□□□□□ -0.69
STRN3-201ENST00000355683 UNQ6190/PRO20217Q6UXQ8 127 aa10.75□□□□□ -0.69
STRN3-201ENST00000355683 C3orf84H3BNL1 204 aa10.75□□□□□ -0.69
STRN3-201ENST00000355683 PRR4Q16378 134 aa10.75□□□□□ -0.69
STRN3-201ENST00000355683 UBE2DNLQ8IWF7 75 aa10.75□□□□□ -0.69
STRN3-201ENST00000355683 BRK1Q8WUW1 75 aa10.74□□□□□ -0.69
STRN3-201ENST00000355683 DIRC1Q969H9 104 aa10.74□□□□□ -0.69
STRN3-201ENST00000355683 PKIGQ9Y2B9 76 aa10.74□□□□□ -0.69
STRN3-201ENST00000355683 LINC00337Q8N6G1 96 aa10.74□□□□□ -0.69
STRN3-201ENST00000355683 IBA57-AS1B1ANH7 110 aa10.73□□□□□ -0.69
STRN3-201ENST00000355683 LINC01546A6NGU7 62 aa10.72□□□□□ -0.69
STRN3-201ENST00000355683 COX7CP15954 63 aa10.72□□□□□ -0.69
STRN3-201ENST00000355683 C5orf47Q569G3 176 aa10.72□□□□□ -0.69
STRN3-201ENST00000355683 IGKV2-28A0A075B6P5 120 aa10.72□□□□□ -0.69
STRN3-201ENST00000355683 ETDCA0A1B0GVM5 59 aa10.72□□□□□ -0.69
STRN3-201ENST00000355683 IGKV2D-28P01615 120 aa10.72□□□□□ -0.69
STRN3-201ENST00000355683 FAM218AQ96MZ4 157 aa10.72□□□□□ -0.69
STRN3-201ENST00000355683 FHL2Q14192 279 aa10.71□□□□□ -0.7
STRN3-201ENST00000355683 VPS13CQ709C8 3753 aa10.71□□□□□ -0.7
STRN3-201ENST00000355683 HRCT1Q6UXD1 115 aa10.7□□□□□ -0.7
STRN3-201ENST00000355683 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
STRN3-201ENST00000355683 C9orf66Q5T8R8 295 aa10.7□□□□□ -0.7
STRN3-201ENST00000355683 IGKV2-24A0A0C4DH68 120 aa10.69□□□□□ -0.7
STRN3-201ENST00000355683 TIMM17BO60830 172 aa10.69□□□□□ -0.7
STRN3-201ENST00000355683 FAM19A1Q7Z5A9 133 aa10.69□□□□□ -0.7
STRN3-201ENST00000355683 SERP2Q8N6R1 65 aa10.69□□□□□ -0.7
STRN3-201ENST00000355683 LINC00846Q9NV44 126 aa10.69□□□□□ -0.7
STRN3-201ENST00000355683 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
STRN3-201ENST00000355683 LRCOL1A6NCL2 159 aa10.68□□□□□ -0.7
STRN3-201ENST00000355683 IGLV1-51P01701 117 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms