RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 SPANXCQ9NY87 97 aa9.71□□□□□ -0.86
EBF3-201ENST00000355311 A8MTW9 85 aa9.7□□□□□ -0.86
EBF3-201ENST00000355311 LINC00158P58513 81 aa9.7□□□□□ -0.86
EBF3-201ENST00000355311 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
EBF3-201ENST00000355311 LINC01600Q96MT4 127 aa9.7□□□□□ -0.86
EBF3-201ENST00000355311 DEFB135Q30KP9 77 aa9.69□□□□□ -0.86
EBF3-201ENST00000355311 TENM3Q9P273 2699 aa9.69□□□□□ -0.86
EBF3-201ENST00000355311 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
EBF3-201ENST00000355311 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
EBF3-201ENST00000355311 LINC00643Q86TS7 51 aa9.69□□□□□ -0.86
EBF3-201ENST00000355311 LRRC75A-AS1Q8N1F1 130 aa9.69□□□□□ -0.86
EBF3-201ENST00000355311 C19orf73Q9NVV2 129 aa9.69□□□□□ -0.86
EBF3-201ENST00000355311 COL6A5A8TX70 2615 aa9.69□□□□□ -0.86
EBF3-201ENST00000355311 MIR7-3HGQ8N6C7 128 aa9.69□□□□□ -0.86
EBF3-201ENST00000355311 INAFM1C9JVW0 142 aa9.68□□□□□ -0.86
EBF3-201ENST00000355311 ATP5G1P05496 136 aa9.68□□□□□ -0.86
EBF3-201ENST00000355311 GYPEP15421 78 aa9.68□□□□□ -0.86
EBF3-201ENST00000355311 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
EBF3-201ENST00000355311 C14orf132Q9NPU4 83 aa9.67□□□□□ -0.86
EBF3-201ENST00000355311 COX7A2LO14548 114 aa9.67□□□□□ -0.86
EBF3-201ENST00000355311 OXTP01178 125 aa9.67□□□□□ -0.86
EBF3-201ENST00000355311 IGLV1-51P01701 117 aa9.67□□□□□ -0.86
EBF3-201ENST00000355311 COX7CP15954 63 aa9.67□□□□□ -0.86
EBF3-201ENST00000355311 J3KT08 172 aa9.66□□□□□ -0.86
EBF3-201ENST00000355311 OR13C6PQ8NH95 151 aa9.66□□□□□ -0.86
EBF3-201ENST00000355311 FHL2Q14192 279 aa9.66□□□□□ -0.86
EBF3-201ENST00000355311 C4orf26Q17RF5 130 aa9.66□□□□□ -0.86
EBF3-201ENST00000355311 A0A1B0GX51 115 aa9.66□□□□□ -0.86
EBF3-201ENST00000355311 NDUFA1O15239 70 aa9.66□□□□□ -0.86
EBF3-201ENST00000355311 C5orf47Q569G3 176 aa9.66□□□□□ -0.86
EBF3-201ENST00000355311 CSNK1G2-AS1Q8NCQ2 148 aa9.65□□□□□ -0.87
EBF3-201ENST00000355311 WFDC9Q8NEX5 89 aa9.65□□□□□ -0.87
EBF3-201ENST00000355311 F5H768 121 aa9.64□□□□□ -0.87
EBF3-201ENST00000355311 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
EBF3-201ENST00000355311 IMUPQ9GZP8 106 aa9.64□□□□□ -0.87
EBF3-201ENST00000355311 SLPIP03973 132 aa9.63□□□□□ -0.87
EBF3-201ENST00000355311 C16orf74Q96GX8 76 aa9.63□□□□□ -0.87
EBF3-201ENST00000355311 LY6G6DO95868 133 aa9.63□□□□□ -0.87
EBF3-201ENST00000355311 IL17DQ8TAD2 202 aa9.63□□□□□ -0.87
EBF3-201ENST00000355311 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
EBF3-201ENST00000355311 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
EBF3-201ENST00000355311 TRBV6-8A0A0A6YYG3 113 aa9.62□□□□□ -0.87
EBF3-201ENST00000355311 PAX4O43316 350 aa9.62□□□□□ -0.87
EBF3-201ENST00000355311 ACYP1P07311 99 aa9.62□□□□□ -0.87
EBF3-201ENST00000355311 RNASE1P07998 156 aaKnown RBP9.62□□□□□ -0.87
EBF3-201ENST00000355311 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
EBF3-201ENST00000355311 BAHCC1Q9P281 2608 aa9.62□□□□□ -0.87
EBF3-201ENST00000355311 C6orf226Q5I0X4 101 aa9.62□□□□□ -0.87
EBF3-201ENST00000355311 CSMD3Q7Z407 3707 aa9.62□□□□□ -0.87
EBF3-201ENST00000355311 A0A087WYN8 130 aa9.61□□□□□ -0.87
EBF3-201ENST00000355311 IGLV5-39A0A0G2JS06 123 aa9.61□□□□□ -0.87
EBF3-201ENST00000355311 J3QKU1 62 aa9.61□□□□□ -0.87
EBF3-201ENST00000355311 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
EBF3-201ENST00000355311 LINC00846Q9NV44 126 aa9.61□□□□□ -0.87
EBF3-201ENST00000355311 TMEM86BQ8N661 226 aa9.61□□□□□ -0.87
EBF3-201ENST00000355311 LINC00337Q8N6G1 96 aa9.61□□□□□ -0.87
EBF3-201ENST00000355311 ANK2Q01484 3957 aa9.61□□□□□ -0.87
EBF3-201ENST00000355311 KMT2BQ9UMN6 2715 aaPredicted RBP9.6□□□□□ -0.87
EBF3-201ENST00000355311 TRBV10-1A0A0K0K1A3 114 aa9.6□□□□□ -0.87
EBF3-201ENST00000355311 NCR3O14931 201 aa9.6□□□□□ -0.87
EBF3-201ENST00000355311 TRACP01848 142 aa9.6□□□□□ -0.87
EBF3-201ENST00000355311 HILS1P60008 231 aa9.6□□□□□ -0.87
EBF3-201ENST00000355311 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
EBF3-201ENST00000355311 HIST1H4AP62805 103 aaKnown RBP9.6□□□□□ -0.87
EBF3-201ENST00000355311 IGLV5-45A0A087WSX0 123 aa9.59□□□□□ -0.87
EBF3-201ENST00000355311 LINC00269Q8N2A0 174 aa9.59□□□□□ -0.87
EBF3-201ENST00000355311 DNAL4O96015 105 aa9.59□□□□□ -0.87
EBF3-201ENST00000355311 MALP21145 153 aa9.59□□□□□ -0.87
EBF3-201ENST00000355311 DPH3Q96FX2 82 aa9.59□□□□□ -0.87
EBF3-201ENST00000355311 CRYGAP11844 174 aa9.58□□□□□ -0.88
EBF3-201ENST00000355311 MGAM2Q2M2H8 2515 aa9.57□□□□□ -0.88
EBF3-201ENST00000355311 ANGP03950 147 aaKnown RBP9.57□□□□□ -0.88
EBF3-201ENST00000355311 LINC01561Q8N1V8 128 aa9.57□□□□□ -0.88
EBF3-201ENST00000355311 CELA1Q9UNI1 258 aa9.57□□□□□ -0.88
EBF3-201ENST00000355311 IGKV2-28A0A075B6P5 120 aa9.57□□□□□ -0.88
EBF3-201ENST00000355311 TRBV6-4A0A1B0GX49 114 aa9.57□□□□□ -0.88
EBF3-201ENST00000355311 IGKV2D-28P01615 120 aa9.57□□□□□ -0.88
EBF3-201ENST00000355311 CCL18P55774 89 aa9.57□□□□□ -0.88
EBF3-201ENST00000355311 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
EBF3-201ENST00000355311 ATOX1O00244 68 aa9.56□□□□□ -0.88
EBF3-201ENST00000355311 RPL18AQ02543 176 aaKnown RBP9.56□□□□□ -0.88
EBF3-201ENST00000355311 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
EBF3-201ENST00000355311 CRPP02741 224 aa9.54□□□□□ -0.88
EBF3-201ENST00000355311 SMIM11BQ8TCY0 68 aa9.54□□□□□ -0.88
EBF3-201ENST00000355311 X6R8D5 127 aa9.54□□□□□ -0.88
EBF3-201ENST00000355311 USP17L23D6RBM5 183 aa9.54□□□□□ -0.88
EBF3-201ENST00000355311 C6orf223Q8N319 242 aa9.54□□□□□ -0.88
EBF3-201ENST00000355311 LECT2O14960 151 aa9.54□□□□□ -0.88
EBF3-201ENST00000355311 TRAV23DV6A0A075B6W5 121 aa9.53□□□□□ -0.88
EBF3-201ENST00000355311 TIMM17BO60830 172 aa9.53□□□□□ -0.88
EBF3-201ENST00000355311 INAFM2P0DMQ5 153 aa9.53□□□□□ -0.88
EBF3-201ENST00000355311 RETNQ9HD89 108 aa9.53□□□□□ -0.88
EBF3-201ENST00000355311 CXCL5P42830 114 aa9.52□□□□□ -0.88
EBF3-201ENST00000355311 OVOL2Q9BRP0 275 aa9.52□□□□□ -0.89
EBF3-201ENST00000355311 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
EBF3-201ENST00000355311 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
EBF3-201ENST00000355311 C16orf95Q9H693 158 aa9.51□□□□□ -0.89
EBF3-201ENST00000355311 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
EBF3-201ENST00000355311 SERP2Q8N6R1 65 aa9.51□□□□□ -0.89
EBF3-201ENST00000355311 FAM19A1Q7Z5A9 133 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms