RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 FABP2P12104 132 aa11.6□□□□□ -0.55
VPS13B-201ENST00000355155 CLPSL2Q6UWE3 100 aa11.6□□□□□ -0.55
VPS13B-201ENST00000355155 IGHV3-33P01772 117 aa11.59□□□□□ -0.55
VPS13B-201ENST00000355155 GTF2H5Q6ZYL4 71 aa11.59□□□□□ -0.55
VPS13B-201ENST00000355155 APOMO95445 188 aa11.59□□□□□ -0.55
VPS13B-201ENST00000355155 COX17Q14061 63 aa11.59□□□□□ -0.55
VPS13B-201ENST00000355155 GAGE12HA6NDE8 117 aa11.58□□□□□ -0.56
VPS13B-201ENST00000355155 PGPEP1Q9NXJ5 209 aa11.58□□□□□ -0.56
VPS13B-201ENST00000355155 SOSTDC1Q6X4U4 206 aa11.57□□□□□ -0.56
VPS13B-201ENST00000355155 TENM3Q9P273 2699 aa11.57□□□□□ -0.56
VPS13B-201ENST00000355155 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
VPS13B-201ENST00000355155 F8WDY8 70 aa11.56□□□□□ -0.56
VPS13B-201ENST00000355155 CRPP02741 224 aa11.56□□□□□ -0.56
VPS13B-201ENST00000355155 DNAH1Q9P2D7 4330 aa11.56□□□□□ -0.56
VPS13B-201ENST00000355155 GAGE10A6NGK3 116 aa11.56□□□□□ -0.56
VPS13B-201ENST00000355155 PRSS2P07478 247 aa11.56□□□□□ -0.56
VPS13B-201ENST00000355155 C6orf226Q5I0X4 101 aa11.56□□□□□ -0.56
VPS13B-201ENST00000355155 MEIG1Q5JSS6 88 aa11.56□□□□□ -0.56
VPS13B-201ENST00000355155 LINC00588Q9Y4M8 146 aa11.56□□□□□ -0.56
VPS13B-201ENST00000355155 TOMM7Q9P0U1 55 aa11.55□□□□□ -0.56
VPS13B-201ENST00000355155 ERG28Q9UKR5 140 aa11.55□□□□□ -0.56
VPS13B-201ENST00000355155 SPCS1Q9Y6A9 102 aa11.55□□□□□ -0.56
VPS13B-201ENST00000355155 LYRM7Q5U5X0 104 aa11.54□□□□□ -0.56
VPS13B-201ENST00000355155 MALP21145 153 aa11.53□□□□□ -0.56
VPS13B-201ENST00000355155 IGLV10-54A0A075B6I4 117 aa11.53□□□□□ -0.56
VPS13B-201ENST00000355155 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
VPS13B-201ENST00000355155 UBE2WQ96B02 151 aa11.52□□□□□ -0.56
VPS13B-201ENST00000355155 NAA38Q9BRA0 125 aaKnown RBP11.52□□□□□ -0.56
VPS13B-201ENST00000355155 CCL18P55774 89 aa11.51□□□□□ -0.57
VPS13B-201ENST00000355155 CFAP161Q6P656 301 aa11.51□□□□□ -0.57
VPS13B-201ENST00000355155 MIR7-3HGQ8N6C7 128 aa11.51□□□□□ -0.57
VPS13B-201ENST00000355155 NTN5Q8WTR8 489 aaPredicted RBP11.51□□□□□ -0.57
VPS13B-201ENST00000355155 DAND5Q8N907 189 aa11.5□□□□□ -0.57
VPS13B-201ENST00000355155 APLNQ9ULZ1 77 aa11.5□□□□□ -0.57
VPS13B-201ENST00000355155 TRBV20-1A0A075B6N2 111 aa11.5□□□□□ -0.57
VPS13B-201ENST00000355155 CKS1BP61024 79 aa11.5□□□□□ -0.57
VPS13B-201ENST00000355155 NBEAL1Q6ZS30 2694 aa11.49□□□□□ -0.57
VPS13B-201ENST00000355155 SPAG11BQ08648 103 aa11.49□□□□□ -0.57
VPS13B-201ENST00000355155 C2orf48Q96LS8 159 aa11.49□□□□□ -0.57
VPS13B-201ENST00000355155 LINC00158P58513 81 aa11.47□□□□□ -0.57
VPS13B-201ENST00000355155 NDUFC2O95298 119 aa11.47□□□□□ -0.57
VPS13B-201ENST00000355155 C2orf82Q6UX34 121 aa11.47□□□□□ -0.57
VPS13B-201ENST00000355155 LINC01600Q96MT4 127 aa11.47□□□□□ -0.57
VPS13B-201ENST00000355155 C15orf56Q8N910 161 aa11.46□□□□□ -0.57
VPS13B-201ENST00000355155 C1orf43Q9BWL3 253 aa11.45□□□□□ -0.58
VPS13B-201ENST00000355155 TRAV13-2A0A0B4J235 113 aa11.45□□□□□ -0.58
VPS13B-201ENST00000355155 PRO0461Q9UI25 63 aa11.45□□□□□ -0.58
VPS13B-201ENST00000355155 NPC2P61916 151 aa11.45□□□□□ -0.58
VPS13B-201ENST00000355155 NOTCH1P46531 2555 aa11.44□□□□□ -0.58
VPS13B-201ENST00000355155 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
VPS13B-201ENST00000355155 F8W1H4 67 aa11.44□□□□□ -0.58
VPS13B-201ENST00000355155 M0QXV9 152 aa11.44□□□□□ -0.58
VPS13B-201ENST00000355155 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
VPS13B-201ENST00000355155 SND1-IT1Q9HBX3 110 aa11.44□□□□□ -0.58
VPS13B-201ENST00000355155 NUPR2A6NF83 97 aa11.43□□□□□ -0.58
VPS13B-201ENST00000355155 RPL13AP40429 203 aaKnown RBP11.43□□□□□ -0.58
VPS13B-201ENST00000355155 DNAH7Q8WXX0 4024 aa11.43□□□□□ -0.58
VPS13B-201ENST00000355155 A0A0U1RRA0 63 aa11.42□□□□□ -0.58
VPS13B-201ENST00000355155 RMI2Q96E14 147 aa11.42□□□□□ -0.58
VPS13B-201ENST00000355155 TRIAP1O43715 76 aa11.41□□□□□ -0.58
VPS13B-201ENST00000355155 RNF151Q2KHN1 245 aa11.41□□□□□ -0.58
VPS13B-201ENST00000355155 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
VPS13B-201ENST00000355155 UNQ6190/PRO20217Q6UXQ8 127 aa11.41□□□□□ -0.58
VPS13B-201ENST00000355155 TCL1BO95988 128 aa11.41□□□□□ -0.58
VPS13B-201ENST00000355155 PFN2P35080 140 aa11.41□□□□□ -0.58
VPS13B-201ENST00000355155 C6orf223Q8N319 242 aa11.41□□□□□ -0.58
VPS13B-201ENST00000355155 C6orf48Q9UBA6 75 aa11.4□□□□□ -0.58
VPS13B-201ENST00000355155 RPL28P46779 137 aaKnown RBP11.4□□□□□ -0.59
VPS13B-201ENST00000355155 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
VPS13B-201ENST00000355155 MGAM2Q2M2H8 2515 aa11.38□□□□□ -0.59
VPS13B-201ENST00000355155 H3BMG7 143 aa11.37□□□□□ -0.59
VPS13B-201ENST00000355155 IGKV2D-24A0A075B6R9 120 aa11.37□□□□□ -0.59
VPS13B-201ENST00000355155 ZNF561-AS1K7EIQ3 104 aa11.36□□□□□ -0.59
VPS13B-201ENST00000355155 COX6CP09669 75 aa11.36□□□□□ -0.59
VPS13B-201ENST00000355155 PSMB2P49721 201 aa11.36□□□□□ -0.59
VPS13B-201ENST00000355155 ATXN8Q156A1 80 aa11.36□□□□□ -0.59
VPS13B-201ENST00000355155 Q1RN00 199 aa11.36□□□□□ -0.59
VPS13B-201ENST00000355155 COL7A1Q02388 2944 aa11.35□□□□□ -0.59
VPS13B-201ENST00000355155 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
VPS13B-201ENST00000355155 SCGB1C2P0DMR2 95 aa11.34□□□□□ -0.59
VPS13B-201ENST00000355155 C9orf116Q5BN46 136 aaPredicted RBP11.34□□□□□ -0.59
VPS13B-201ENST00000355155 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
VPS13B-201ENST00000355155 LST1O00453 97 aa11.34□□□□□ -0.59
VPS13B-201ENST00000355155 DNHD1Q96M86 4753 aa11.34□□□□□ -0.59
VPS13B-201ENST00000355155 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
VPS13B-201ENST00000355155 SMCPP49901 116 aaPredicted RBP11.32□□□□□ -0.6
VPS13B-201ENST00000355155 H7C2G1 150 aa11.32□□□□□ -0.6
VPS13B-201ENST00000355155 Q6ZRU5 148 aa11.32□□□□□ -0.6
VPS13B-201ENST00000355155 PRKDCP78527 4128 aaKnown RBP11.32□□□□□ -0.6
VPS13B-201ENST00000355155 HIGD2BQ4VC39 106 aa11.31□□□□□ -0.6
VPS13B-201ENST00000355155 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
VPS13B-201ENST00000355155 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
VPS13B-201ENST00000355155 LINC01620Q4KN68 170 aa11.3□□□□□ -0.6
VPS13B-201ENST00000355155 SYCNQ0VAF6 134 aa11.29□□□□□ -0.6
VPS13B-201ENST00000355155 KRTAP1-5Q9BYS1 174 aa11.29□□□□□ -0.6
VPS13B-201ENST00000355155 Q8NDZ9 215 aa11.29□□□□□ -0.6
VPS13B-201ENST00000355155 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
VPS13B-201ENST00000355155 Q9HAA7 133 aa11.29□□□□□ -0.6
VPS13B-201ENST00000355155 WFDC2Q14508 124 aa11.28□□□□□ -0.6
VPS13B-201ENST00000355155 SMIM11BQ8TCY0 68 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms