RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 MIFP14174 115 aa12.9□□□□□ -0.34
ATRIP-202ENST00000346691 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
ATRIP-202ENST00000346691 NDUFA1O15239 70 aa12.89□□□□□ -0.35
ATRIP-202ENST00000346691 COX6CP09669 75 aa12.89□□□□□ -0.35
ATRIP-202ENST00000346691 MIAQ16674 131 aa12.89□□□□□ -0.35
ATRIP-202ENST00000346691 Q8N3U1 123 aa12.89□□□□□ -0.35
ATRIP-202ENST00000346691 H3BT86 120 aa12.88□□□□□ -0.35
ATRIP-202ENST00000346691 CLPSL2Q6UWE3 100 aa12.88□□□□□ -0.35
ATRIP-202ENST00000346691 BAHCC1Q9P281 2608 aa12.86□□□□□ -0.35
ATRIP-202ENST00000346691 CLEC2BQ92478 149 aa12.86□□□□□ -0.35
ATRIP-202ENST00000346691 CCDC179H3BU77 68 aa12.85□□□□□ -0.35
ATRIP-202ENST00000346691 ATP5G1P05496 136 aa12.85□□□□□ -0.35
ATRIP-202ENST00000346691 MAST4O15021 2626 aa12.85□□□□□ -0.35
ATRIP-202ENST00000346691 SPART-AS1P0CW21 52 aa12.85□□□□□ -0.35
ATRIP-202ENST00000346691 LST1O00453 97 aa12.84□□□□□ -0.35
ATRIP-202ENST00000346691 C5orf38Q86SI9 138 aa12.84□□□□□ -0.35
ATRIP-202ENST00000346691 LINC00959A0A1B0GUT2 108 aa12.83□□□□□ -0.36
ATRIP-202ENST00000346691 MRPL23Q16540 153 aaKnown RBP12.83□□□□□ -0.36
ATRIP-202ENST00000346691 IGHV3OR16-9A0A0B4J2B5 98 aa12.82□□□□□ -0.36
ATRIP-202ENST00000346691 DEFB121Q5J5C9 76 aa12.82□□□□□ -0.36
ATRIP-202ENST00000346691 TOMM7Q9P0U1 55 aa12.82□□□□□ -0.36
ATRIP-202ENST00000346691 TIMM17BO60830 172 aa12.82□□□□□ -0.36
ATRIP-202ENST00000346691 FAM240AA0A1B0GVK7 77 aa12.81□□□□□ -0.36
ATRIP-202ENST00000346691 EGFEM1PQ0D2K5 195 aa12.81□□□□□ -0.36
ATRIP-202ENST00000346691 SHISA2Q6UWI4 295 aa12.81□□□□□ -0.36
ATRIP-202ENST00000346691 XCL1P47992 114 aa12.8□□□□□ -0.36
ATRIP-202ENST00000346691 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
ATRIP-202ENST00000346691 COX7B2Q8TF08 81 aa12.79□□□□□ -0.36
ATRIP-202ENST00000346691 DNAH3Q8TD57 4116 aa12.79□□□□□ -0.36
ATRIP-202ENST00000346691 MEIG1Q5JSS6 88 aa12.79□□□□□ -0.36
ATRIP-202ENST00000346691 A0A1B0GUV1 79 aa12.78□□□□□ -0.36
ATRIP-202ENST00000346691 LINC00269Q8N2A0 174 aa12.78□□□□□ -0.36
ATRIP-202ENST00000346691 TENM3Q9P273 2699 aa12.78□□□□□ -0.36
ATRIP-202ENST00000346691 LINC00308Q8TCZ7 52 aa12.77□□□□□ -0.37
ATRIP-202ENST00000346691 C11orf68Q9H3H3 251 aaKnown RBP12.77□□□□□ -0.37
ATRIP-202ENST00000346691 A0A087WZ39 114 aa12.76□□□□□ -0.37
ATRIP-202ENST00000346691 CIRBPQ14011 172 aaKnown RBP12.76□□□□□ -0.37
ATRIP-202ENST00000346691 PRB2P02812 416 aaPredicted RBP12.76□□□□□ -0.37
ATRIP-202ENST00000346691 COL6A5A8TX70 2615 aa12.75□□□□□ -0.37
ATRIP-202ENST00000346691 IGLV10-54A0A075B6I4 117 aa12.75□□□□□ -0.37
ATRIP-202ENST00000346691 ANGP03950 147 aaKnown RBP12.74□□□□□ -0.37
ATRIP-202ENST00000346691 TRBV7-7A0A0K0K1E9 115 aa12.73□□□□□ -0.37
ATRIP-202ENST00000346691 SS18Q15532 418 aa12.73□□□□□ -0.37
ATRIP-202ENST00000346691 HERV-K104P63124 156 aa12.72□□□□□ -0.37
ATRIP-202ENST00000346691 NOTCH1P46531 2555 aa12.72□□□□□ -0.37
ATRIP-202ENST00000346691 Q6ZTC4 211 aa12.71□□□□□ -0.37
ATRIP-202ENST00000346691 REG3AQ06141 175 aa12.7□□□□□ -0.38
ATRIP-202ENST00000346691 COX7A2LO14548 114 aa12.69□□□□□ -0.38
ATRIP-202ENST00000346691 ACYP1P07311 99 aa12.69□□□□□ -0.38
ATRIP-202ENST00000346691 A0A0J9YWU9 116 aa12.68□□□□□ -0.38
ATRIP-202ENST00000346691 MIR7-3HGQ8N6C7 128 aa12.68□□□□□ -0.38
ATRIP-202ENST00000346691 CHCHD10Q8WYQ3 142 aaPredicted RBP12.68□□□□□ -0.38
ATRIP-202ENST00000346691 LELP1Q5T871 98 aa12.68□□□□□ -0.38
ATRIP-202ENST00000346691 PFN2P35080 140 aa12.67□□□□□ -0.38
ATRIP-202ENST00000346691 LYPD5Q6UWN5 251 aa12.67□□□□□ -0.38
ATRIP-202ENST00000346691 LINC00158P58513 81 aa12.66□□□□□ -0.38
ATRIP-202ENST00000346691 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
ATRIP-202ENST00000346691 C6orf226Q5I0X4 101 aa12.66□□□□□ -0.38
ATRIP-202ENST00000346691 SMIM20Q8N5G0 67 aa12.66□□□□□ -0.38
ATRIP-202ENST00000346691 IMUPQ9GZP8 106 aa12.66□□□□□ -0.38
ATRIP-202ENST00000346691 KPRPQ5T749 579 aaPredicted RBP12.65□□□□□ -0.38
ATRIP-202ENST00000346691 COPS9Q8WXC6 57 aa12.65□□□□□ -0.38
ATRIP-202ENST00000346691 KLK12Q9UKR0 248 aa12.64□□□□□ -0.39
ATRIP-202ENST00000346691 CD164L2Q6UWJ8 174 aa12.64□□□□□ -0.39
ATRIP-202ENST00000346691 FAM236AA0A1B0GUQ0 79 aa12.62□□□□□ -0.39
ATRIP-202ENST00000346691 FAM236BA0A1B0GV22 79 aa12.62□□□□□ -0.39
ATRIP-202ENST00000346691 TRACP01848 142 aa12.62□□□□□ -0.39
ATRIP-202ENST00000346691 SMCR5Q8TEV8 140 aa12.62□□□□□ -0.39
ATRIP-202ENST00000346691 WFDC10BQ8IUB3 73 aa12.62□□□□□ -0.39
ATRIP-202ENST00000346691 NBEAL1Q6ZS30 2694 aa12.61□□□□□ -0.39
ATRIP-202ENST00000346691 BAALC-AS2P0C853 105 aa12.61□□□□□ -0.39
ATRIP-202ENST00000346691 LINC00643Q86TS7 51 aa12.61□□□□□ -0.39
ATRIP-202ENST00000346691 KIAA0087Q14695 138 aa12.61□□□□□ -0.39
ATRIP-202ENST00000346691 Q8IZM0 81 aa12.61□□□□□ -0.39
ATRIP-202ENST00000346691 CCL18P55774 89 aa12.6□□□□□ -0.39
ATRIP-202ENST00000346691 ENHOQ6UWT2 76 aa12.6□□□□□ -0.39
ATRIP-202ENST00000346691 IBA57-AS1B1ANH7 110 aa12.6□□□□□ -0.39
ATRIP-202ENST00000346691 LINC00526Q96FQ7 95 aa12.59□□□□□ -0.39
ATRIP-202ENST00000346691 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
ATRIP-202ENST00000346691 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
ATRIP-202ENST00000346691 MALP21145 153 aa12.59□□□□□ -0.39
ATRIP-202ENST00000346691 MRAPQ8TCY5 172 aa12.59□□□□□ -0.39
ATRIP-202ENST00000346691 SND1-IT1Q9HBX3 110 aa12.59□□□□□ -0.39
ATRIP-202ENST00000346691 SDIM1Q6ZPB5 146 aa12.58□□□□□ -0.4
ATRIP-202ENST00000346691 TMEM126AQ9H061 195 aa12.58□□□□□ -0.4
ATRIP-202ENST00000346691 C22orf24Q9Y442 160 aa12.58□□□□□ -0.4
ATRIP-202ENST00000346691 LINC00337Q8N6G1 96 aa12.58□□□□□ -0.4
ATRIP-202ENST00000346691 FAM218AQ96MZ4 157 aa12.58□□□□□ -0.4
ATRIP-202ENST00000346691 C9orf116Q5BN46 136 aaPredicted RBP12.57□□□□□ -0.4
ATRIP-202ENST00000346691 C11orf45Q8TAV5 145 aa12.57□□□□□ -0.4
ATRIP-202ENST00000346691 PRR34Q9NV39 138 aa12.57□□□□□ -0.4
ATRIP-202ENST00000346691 C6orf223Q8N319 242 aa12.57□□□□□ -0.4
ATRIP-202ENST00000346691 ESRGQ1W209 222 aa12.56□□□□□ -0.4
ATRIP-202ENST00000346691 DEFB131BA0A096LNP1 70 aa12.56□□□□□ -0.4
ATRIP-202ENST00000346691 K7EIL1 84 aa12.56□□□□□ -0.4
ATRIP-202ENST00000346691 LINC01561Q8N1V8 128 aa12.56□□□□□ -0.4
ATRIP-202ENST00000346691 PPDPFQ9H3Y8 114 aa12.55□□□□□ -0.4
ATRIP-202ENST00000346691 H3BNG1 76 aa12.54□□□□□ -0.4
ATRIP-202ENST00000346691 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
ATRIP-202ENST00000346691 C10orf25Q5T742 122 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms