RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ODF1Q14990 250 aa7.64□□□□□ -1.19
SGCA-202ENST00000344627 KIAA1644Q3SXP7 199 aa7.64□□□□□ -1.19
SGCA-202ENST00000344627 C2orf82Q6UX34 121 aa7.64□□□□□ -1.19
SGCA-202ENST00000344627 NXT2Q9NPJ8 142 aaKnown RBP7.64□□□□□ -1.19
SGCA-202ENST00000344627 TLX1NBP0CAT3 122 aa7.63□□□□□ -1.19
SGCA-202ENST00000344627 G0S2P27469 103 aa7.63□□□□□ -1.19
SGCA-202ENST00000344627 KIAA0087Q14695 138 aa7.63□□□□□ -1.19
SGCA-202ENST00000344627 K7EMI3 77 aa7.62□□□□□ -1.19
SGCA-202ENST00000344627 CKS1BP61024 79 aa7.62□□□□□ -1.19
SGCA-202ENST00000344627 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
SGCA-202ENST00000344627 AMELXQ99217 191 aa7.62□□□□□ -1.19
SGCA-202ENST00000344627 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
SGCA-202ENST00000344627 UBE2BP63146 152 aa7.61□□□□□ -1.19
SGCA-202ENST00000344627 PAPPA-AS1Q5QFB9 102 aa7.61□□□□□ -1.19
SGCA-202ENST00000344627 LINC00173Q6ZV60 143 aa7.61□□□□□ -1.19
SGCA-202ENST00000344627 LINC01561Q8N1V8 128 aa7.61□□□□□ -1.19
SGCA-202ENST00000344627 ALKBH7Q9BT30 221 aaPredicted RBP7.61□□□□□ -1.19
SGCA-202ENST00000344627 GEMIN7Q9H840 131 aaKnown RBP7.61□□□□□ -1.19
SGCA-202ENST00000344627 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
SGCA-202ENST00000344627 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
SGCA-202ENST00000344627 M0QXV9 152 aa7.6□□□□□ -1.19
SGCA-202ENST00000344627 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
SGCA-202ENST00000344627 NPSP0C0P6 89 aa7.59□□□□□ -1.19
SGCA-202ENST00000344627 RAB5BP61020 215 aa7.59□□□□□ -1.19
SGCA-202ENST00000344627 HERVK_113P63121 156 aa7.59□□□□□ -1.19
SGCA-202ENST00000344627 SEC11AP67812 179 aa7.59□□□□□ -1.19
SGCA-202ENST00000344627 LINC00469Q8N7U9 141 aa7.59□□□□□ -1.19
SGCA-202ENST00000344627 DIRC1Q969H9 104 aa7.59□□□□□ -1.19
SGCA-202ENST00000344627 SCGB3A1Q96QR1 104 aa7.59□□□□□ -1.19
SGCA-202ENST00000344627 TRGC2P03986 189 aa7.58□□□□□ -1.2
SGCA-202ENST00000344627 TOMM6Q96B49 74 aa7.58□□□□□ -1.2
SGCA-202ENST00000344627 CDKN2A-AS1Q9UH64 79 aa7.58□□□□□ -1.2
SGCA-202ENST00000344627 KRTAP11-1Q8IUC1 163 aa7.57□□□□□ -1.2
SGCA-202ENST00000344627 TIMM17AQ99595 171 aa7.57□□□□□ -1.2
SGCA-202ENST00000344627 LINC01549A6NIU2 74 aa7.56□□□□□ -1.2
SGCA-202ENST00000344627 C9orf129Q5T035 196 aaKnown RBP7.56□□□□□ -1.2
SGCA-202ENST00000344627 ERASQ7Z444 233 aa7.56□□□□□ -1.2
SGCA-202ENST00000344627 Q8IZM0 81 aa7.56□□□□□ -1.2
SGCA-202ENST00000344627 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
SGCA-202ENST00000344627 FAM19A3Q7Z5A8 133 aa7.55□□□□□ -1.2
SGCA-202ENST00000344627 KRTAP7-1Q8IUC3 87 aa7.55□□□□□ -1.2
SGCA-202ENST00000344627 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
SGCA-202ENST00000344627 F8VRH5 84 aa7.54□□□□□ -1.2
SGCA-202ENST00000344627 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
SGCA-202ENST00000344627 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
SGCA-202ENST00000344627 XAGE1AQ9HD64 81 aa7.54□□□□□ -1.2
SGCA-202ENST00000344627 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
SGCA-202ENST00000344627 H0Y9J4 135 aa7.53□□□□□ -1.2
SGCA-202ENST00000344627 PRR26Q8N8Z3 221 aa7.53□□□□□ -1.2
SGCA-202ENST00000344627 CHCHD1Q96BP2 118 aaKnown RBP7.53□□□□□ -1.2
SGCA-202ENST00000344627 TINCRA0A1B0GVN0 87 aa7.52□□□□□ -1.21
SGCA-202ENST00000344627 LINC00614P0C842 121 aa7.52□□□□□ -1.21
SGCA-202ENST00000344627 RPL13AP40429 203 aaKnown RBP7.52□□□□□ -1.21
SGCA-202ENST00000344627 LBHQ53QV2 105 aaPredicted RBP7.52□□□□□ -1.21
SGCA-202ENST00000344627 COX7B2Q8TF08 81 aa7.52□□□□□ -1.21
SGCA-202ENST00000344627 CST9LQ9H4G1 147 aa7.52□□□□□ -1.21
SGCA-202ENST00000344627 C22orf24Q9Y442 160 aa7.52□□□□□ -1.21
SGCA-202ENST00000344627 SPINK8P0C7L1 97 aa7.51□□□□□ -1.21
SGCA-202ENST00000344627 CXCL5P42830 114 aa7.51□□□□□ -1.21
SGCA-202ENST00000344627 NDUFA6P56556 154 aa7.51□□□□□ -1.21
SGCA-202ENST00000344627 PDZD11Q5EBL8 140 aa7.51□□□□□ -1.21
SGCA-202ENST00000344627 LINC01546A6NGU7 62 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BDP58876 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BCP62807 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 PMVKQ15126 192 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
SGCA-202ENST00000344627 HSBP1O75506 76 aa7.49□□□□□ -1.21
SGCA-202ENST00000344627 S100A6P06703 90 aa7.49□□□□□ -1.21
SGCA-202ENST00000344627 H3BRM9 83 aa7.48□□□□□ -1.21
SGCA-202ENST00000344627 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
SGCA-202ENST00000344627 NUPR1O60356 82 aa7.47□□□□□ -1.21
SGCA-202ENST00000344627 ZNF861PO60384 105 aa7.47□□□□□ -1.21
SGCA-202ENST00000344627 HBDP02042 147 aa7.47□□□□□ -1.21
SGCA-202ENST00000344627 COA6Q5JTJ3 125 aaKnown RBP7.47□□□□□ -1.21
SGCA-202ENST00000344627 LPAP08519 4548 aa7.46□□□□□ -1.21
SGCA-202ENST00000344627 IGLV5-45A0A087WSX0 123 aa7.46□□□□□ -1.22
SGCA-202ENST00000344627 GAGE10A6NGK3 116 aa7.46□□□□□ -1.22
SGCA-202ENST00000344627 RPL37AP8A6NKH3 93 aa7.46□□□□□ -1.22
SGCA-202ENST00000344627 A0A0U1RQV1 116 aa7.45□□□□□ -1.22
SGCA-202ENST00000344627 SERF1AO75920 110 aa7.45□□□□□ -1.22
SGCA-202ENST00000344627 ATP5LO75964 103 aa7.45□□□□□ -1.22
SGCA-202ENST00000344627 NKAPP1Q8N9T2 125 aa7.45□□□□□ -1.22
SGCA-202ENST00000344627 LINC00167Q96N53 147 aa7.45□□□□□ -1.22
SGCA-202ENST00000344627 TP73-AS1Q9UF72 201 aa7.45□□□□□ -1.22
SGCA-202ENST00000344627 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
SGCA-202ENST00000344627 PFN2P35080 140 aa7.44□□□□□ -1.22
SGCA-202ENST00000344627 RPL28P46779 137 aaKnown RBP7.44□□□□□ -1.22
SGCA-202ENST00000344627 PMCHL1Q16048 86 aa7.44□□□□□ -1.22
SGCA-202ENST00000344627 HSPB8Q9UJY1 196 aa7.44□□□□□ -1.22
SGCA-202ENST00000344627 BCE1O60756 84 aa7.43□□□□□ -1.22
SGCA-202ENST00000344627 IGLC3P0DOY3 106 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms