RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
RDX-201ENST00000343115 IGHV4-28A0A0C4DH34 117 aa11.64□□□□□ -0.55
RDX-201ENST00000343115 PSCAO43653 123 aa11.64□□□□□ -0.55
RDX-201ENST00000343115 UNC79Q9P2D8 2635 aa11.63□□□□□ -0.55
RDX-201ENST00000343115 FHL2Q14192 279 aa11.63□□□□□ -0.55
RDX-201ENST00000343115 MAST4O15021 2626 aa11.62□□□□□ -0.55
RDX-201ENST00000343115 UBE2DNLQ8IWF7 75 aa11.62□□□□□ -0.55
RDX-201ENST00000343115 UTP20O75691 2785 aaKnown RBP11.62□□□□□ -0.55
RDX-201ENST00000343115 Q8N2B8 174 aa11.62□□□□□ -0.55
RDX-201ENST00000343115 CXCL5P42830 114 aa11.62□□□□□ -0.55
RDX-201ENST00000343115 LYRM9A8MSI8 78 aa11.61□□□□□ -0.55
RDX-201ENST00000343115 CCDC179H3BU77 68 aa11.61□□□□□ -0.55
RDX-201ENST00000343115 SMIM9A6NGZ8 99 aa11.6□□□□□ -0.55
RDX-201ENST00000343115 RBM3P98179 157 aaKnown RBP11.59□□□□□ -0.55
RDX-201ENST00000343115 CLUHP3Q96NS8 147 aa11.59□□□□□ -0.55
RDX-201ENST00000343115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.59□□□□□ -0.55
RDX-201ENST00000343115 JMJD7-PLA2G4BH0Y9G9 81 aa11.58□□□□□ -0.55
RDX-201ENST00000343115 TMEM256-PLSCR3K7ERE1 68 aa11.58□□□□□ -0.56
RDX-201ENST00000343115 TRAV23DV6A0A075B6W5 121 aa11.58□□□□□ -0.56
RDX-201ENST00000343115 EIF4EBP3O60516 100 aaPredicted RBP11.58□□□□□ -0.56
RDX-201ENST00000343115 CSDC2Q9Y534 153 aaKnown RBP11.58□□□□□ -0.56
RDX-201ENST00000343115 ITPR2Q14571 2701 aa11.58□□□□□ -0.56
RDX-201ENST00000343115 CD164L2Q6UWJ8 174 aa11.57□□□□□ -0.56
RDX-201ENST00000343115 DIRC1Q969H9 104 aa11.56□□□□□ -0.56
RDX-201ENST00000343115 A0A087WYN8 130 aa11.56□□□□□ -0.56
RDX-201ENST00000343115 A0A087WZ39 114 aa11.56□□□□□ -0.56
RDX-201ENST00000343115 SOSTDC1Q6X4U4 206 aa11.56□□□□□ -0.56
RDX-201ENST00000343115 LINC00337Q8N6G1 96 aa11.56□□□□□ -0.56
RDX-201ENST00000343115 ATOX1O00244 68 aa11.56□□□□□ -0.56
RDX-201ENST00000343115 UNQ6190/PRO20217Q6UXQ8 127 aa11.56□□□□□ -0.56
RDX-201ENST00000343115 OXLD1Q5BKU9 147 aa11.55□□□□□ -0.56
RDX-201ENST00000343115 UBR5O95071 2799 aaPredicted RBP11.55□□□□□ -0.56
RDX-201ENST00000343115 hADV29S1A0JD25 119 aa11.54□□□□□ -0.56
RDX-201ENST00000343115 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
RDX-201ENST00000343115 SCXQ7RTU7 201 aa11.53□□□□□ -0.56
RDX-201ENST00000343115 F8WEM9 126 aa11.52□□□□□ -0.56
RDX-201ENST00000343115 Q6ZQY7 126 aa11.52□□□□□ -0.57
RDX-201ENST00000343115 HRNRQ86YZ3 2850 aaPredicted RBP11.52□□□□□ -0.57
RDX-201ENST00000343115 MIFP14174 115 aa11.51□□□□□ -0.57
RDX-201ENST00000343115 DCHS2Q6V1P9 2916 aa11.51□□□□□ -0.57
RDX-201ENST00000343115 CYSRT1A8MQ03 144 aa11.51□□□□□ -0.57
RDX-201ENST00000343115 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
RDX-201ENST00000343115 FSHBP01225 129 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 UBE2BP63146 152 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 Q8IZM0 81 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 WFDC9Q8NEX5 89 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 LITAFQ99732 161 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 A8MTW9 85 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 IGHV3OR16-9A0A0B4J2B5 98 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 IGHV4-30-4P0DP06 118 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 ENHOQ6UWT2 76 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 C6orf223Q8N319 242 aa11.5□□□□□ -0.57
RDX-201ENST00000343115 ETDCA0A1B0GVM5 59 aa11.49□□□□□ -0.57
RDX-201ENST00000343115 COX7BP24311 80 aa11.49□□□□□ -0.57
RDX-201ENST00000343115 RETNQ9HD89 108 aa11.49□□□□□ -0.57
RDX-201ENST00000343115 KIR2DL5BQ8NHK3 375 aa11.49□□□□□ -0.57
RDX-201ENST00000343115 SETXQ7Z333 2677 aaKnown RBP11.48□□□□□ -0.57
RDX-201ENST00000343115 PRB2P02812 416 aaPredicted RBP11.48□□□□□ -0.57
RDX-201ENST00000343115 FHL3Q13643 280 aa11.48□□□□□ -0.57
RDX-201ENST00000343115 KPRPQ5T749 579 aaPredicted RBP11.48□□□□□ -0.57
RDX-201ENST00000343115 A0A087WVE0 104 aa11.48□□□□□ -0.57
RDX-201ENST00000343115 A0A096LNT2 108 aa11.48□□□□□ -0.57
RDX-201ENST00000343115 DEFB131BA0A096LNP1 70 aa11.47□□□□□ -0.57
RDX-201ENST00000343115 C11orf45Q8TAV5 145 aa11.47□□□□□ -0.57
RDX-201ENST00000343115 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
RDX-201ENST00000343115 Q8N3U1 123 aa11.46□□□□□ -0.57
RDX-201ENST00000343115 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.58
RDX-201ENST00000343115 LELP1Q5T871 98 aa11.46□□□□□ -0.58
RDX-201ENST00000343115 SMG1Q96Q15 3661 aaKnown RBP11.45□□□□□ -0.58
RDX-201ENST00000343115 NOTCH1P46531 2555 aa11.45□□□□□ -0.58
RDX-201ENST00000343115 FAM240AA0A1B0GVK7 77 aa11.45□□□□□ -0.58
RDX-201ENST00000343115 NREPQ16612 68 aa11.45□□□□□ -0.58
RDX-201ENST00000343115 C20orf197Q8N268 126 aa11.45□□□□□ -0.58
RDX-201ENST00000343115 UPK3BQ9BT76 320 aa11.45□□□□□ -0.58
RDX-201ENST00000343115 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
RDX-201ENST00000343115 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
RDX-201ENST00000343115 NF1P21359 2839 aa11.44□□□□□ -0.58
RDX-201ENST00000343115 UQCRQO14949 82 aa11.44□□□□□ -0.58
RDX-201ENST00000343115 C16orf95Q9H693 158 aa11.44□□□□□ -0.58
RDX-201ENST00000343115 SBSPONQ8IVN8 264 aa11.43□□□□□ -0.58
RDX-201ENST00000343115 CELSR2Q9HCU4 2923 aa11.43□□□□□ -0.58
RDX-201ENST00000343115 IGKV2-24A0A0C4DH68 120 aa11.42□□□□□ -0.58
RDX-201ENST00000343115 USP17L23D6RBM5 183 aa11.41□□□□□ -0.58
RDX-201ENST00000343115 RMI2Q96E14 147 aa11.41□□□□□ -0.58
RDX-201ENST00000343115 C3orf22Q8N5N4 141 aa11.41□□□□□ -0.58
RDX-201ENST00000343115 CELA1Q9UNI1 258 aa11.41□□□□□ -0.58
RDX-201ENST00000343115 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
RDX-201ENST00000343115 FUSP35637 526 aaKnown RBP eCLIP11.39□□□□□ -0.59
RDX-201ENST00000343115 NANOS2P60321 138 aaKnown RBP11.39□□□□□ -0.59
RDX-201ENST00000343115 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
RDX-201ENST00000343115 Q6Q795 121 aa11.39□□□□□ -0.59
RDX-201ENST00000343115 SHISA2Q6UWI4 295 aa11.39□□□□□ -0.59
RDX-201ENST00000343115 Q8N814 137 aa11.39□□□□□ -0.59
RDX-201ENST00000343115 COL6A5A8TX70 2615 aa11.39□□□□□ -0.59
RDX-201ENST00000343115 CITED1Q99966 193 aa11.39□□□□□ -0.59
RDX-201ENST00000343115 TRBV10-3A0A0K0K1G6 114 aa11.39□□□□□ -0.59
RDX-201ENST00000343115 A0A1B0GUV1 79 aa11.39□□□□□ -0.59
RDX-201ENST00000343115 LINC00846Q9NV44 126 aa11.38□□□□□ -0.59
RDX-201ENST00000343115 FBN2P35556 2912 aa11.38□□□□□ -0.59
RDX-201ENST00000343115 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms