RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 Q8IZM0 81 aa12.85□□□□□ -0.35
SMPD1-201ENST00000342245 Q6ZRU5 148 aa12.84□□□□□ -0.35
SMPD1-201ENST00000342245 ZFHX3Q15911 3703 aa12.84□□□□□ -0.35
SMPD1-201ENST00000342245 BPY2O14599 106 aa12.83□□□□□ -0.36
SMPD1-201ENST00000342245 PRYO14603 147 aa12.83□□□□□ -0.36
SMPD1-201ENST00000342245 FUSP35637 526 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMPD1-201ENST00000342245 C19orf84I3L1E1 186 aa12.83□□□□□ -0.36
SMPD1-201ENST00000342245 AKAP6Q13023 2319 aa12.83□□□□□ -0.36
SMPD1-201ENST00000342245 C6orf99Q4VX62 202 aa12.82□□□□□ -0.36
SMPD1-201ENST00000342245 IGKV3OR2-268A0A0C4DH90 116 aa12.81□□□□□ -0.36
SMPD1-201ENST00000342245 MAP6D1Q9H9H5 199 aa12.81□□□□□ -0.36
SMPD1-201ENST00000342245 HIVEP3Q5T1R4 2406 aa12.81□□□□□ -0.36
SMPD1-201ENST00000342245 UBE2E2Q96LR5 201 aa12.79□□□□□ -0.36
SMPD1-201ENST00000342245 M0R2N4 97 aa12.79□□□□□ -0.36
SMPD1-201ENST00000342245 GNLYP22749 145 aa12.78□□□□□ -0.36
SMPD1-201ENST00000342245 MUC7Q8TAX7 377 aa12.78□□□□□ -0.36
SMPD1-201ENST00000342245 IGLV4-60A0A075B6I1 120 aa12.78□□□□□ -0.36
SMPD1-201ENST00000342245 Q6ZTC4 211 aa12.78□□□□□ -0.36
SMPD1-201ENST00000342245 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
SMPD1-201ENST00000342245 TRBV6-8A0A0A6YYG3 113 aa12.76□□□□□ -0.37
SMPD1-201ENST00000342245 ZNF843Q8N446 348 aa12.76□□□□□ -0.37
SMPD1-201ENST00000342245 SPTBN4Q9H254 2564 aa12.76□□□□□ -0.37
SMPD1-201ENST00000342245 PRR3P79522 188 aaKnown RBP12.75□□□□□ -0.37
SMPD1-201ENST00000342245 SPATA3Q8NHX4 192 aa12.75□□□□□ -0.37
SMPD1-201ENST00000342245 VPS13CQ709C8 3753 aa12.74□□□□□ -0.37
SMPD1-201ENST00000342245 C10orf99Q6UWK7 81 aa12.74□□□□□ -0.37
SMPD1-201ENST00000342245 Q1T7F1 81 aa12.73□□□□□ -0.37
SMPD1-201ENST00000342245 NCOR2Q9Y618 2525 aa12.73□□□□□ -0.37
SMPD1-201ENST00000342245 CHD8Q9HCK8 2581 aa12.73□□□□□ -0.37
SMPD1-201ENST00000342245 IGHV4-31P0DP07 118 aa12.72□□□□□ -0.37
SMPD1-201ENST00000342245 OCR1Q9BZK8 76 aa12.72□□□□□ -0.37
SMPD1-201ENST00000342245 CELSR1Q9NYQ6 3014 aa12.71□□□□□ -0.37
SMPD1-201ENST00000342245 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
SMPD1-201ENST00000342245 IGHV4-61A0A0C4DH41 118 aa12.7□□□□□ -0.38
SMPD1-201ENST00000342245 CD164Q04900 197 aa12.7□□□□□ -0.38
SMPD1-201ENST00000342245 PLA2G2AP14555 144 aa12.69□□□□□ -0.38
SMPD1-201ENST00000342245 Q6ZQY7 126 aa12.69□□□□□ -0.38
SMPD1-201ENST00000342245 STHQ8IWL8 128 aa12.69□□□□□ -0.38
SMPD1-201ENST00000342245 ABCA2Q9BZC7 2435 aa12.69□□□□□ -0.38
SMPD1-201ENST00000342245 hDV103S1A0JD37 113 aa12.68□□□□□ -0.38
SMPD1-201ENST00000342245 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.68□□□□□ -0.38
SMPD1-201ENST00000342245 SCXQ7RTU7 201 aa12.68□□□□□ -0.38
SMPD1-201ENST00000342245 SLURP1P55000 103 aa12.67□□□□□ -0.38
SMPD1-201ENST00000342245 BBC3Q96PG8 261 aaPredicted RBP12.67□□□□□ -0.38
SMPD1-201ENST00000342245 SORL1Q92673 2214 aa12.67□□□□□ -0.38
SMPD1-201ENST00000342245 ITPR1Q14643 2758 aa12.66□□□□□ -0.38
SMPD1-201ENST00000342245 TRGV2A0A075B6R0 118 aa12.66□□□□□ -0.38
SMPD1-201ENST00000342245 IGHV4-59P01825 116 aa12.66□□□□□ -0.38
SMPD1-201ENST00000342245 NOP10Q9NPE3 64 aaKnown RBP12.66□□□□□ -0.38
SMPD1-201ENST00000342245 TRGV4A0A0C4DH28 118 aa12.66□□□□□ -0.38
SMPD1-201ENST00000342245 LOC100131303A0A0U1RQF7 123 aa12.65□□□□□ -0.38
SMPD1-201ENST00000342245 COX7BP24311 80 aa12.65□□□□□ -0.38
SMPD1-201ENST00000342245 A0A1B0GUV1 79 aa12.65□□□□□ -0.38
SMPD1-201ENST00000342245 C16orf74Q96GX8 76 aa12.65□□□□□ -0.38
SMPD1-201ENST00000342245 CCL24O00175 119 aa12.64□□□□□ -0.39
SMPD1-201ENST00000342245 IGLV6-57P01721 117 aa12.64□□□□□ -0.39
SMPD1-201ENST00000342245 IGKV4-1P06312 121 aa12.64□□□□□ -0.39
SMPD1-201ENST00000342245 IGHV4-30-2A0A087WSY4 118 aa12.64□□□□□ -0.39
SMPD1-201ENST00000342245 MSMBP08118 114 aa12.64□□□□□ -0.39
SMPD1-201ENST00000342245 DAD1P61803 113 aa12.64□□□□□ -0.39
SMPD1-201ENST00000342245 CD164L2Q6UWJ8 174 aa12.64□□□□□ -0.39
SMPD1-201ENST00000342245 DEFB114Q30KQ6 69 aa12.63□□□□□ -0.39
SMPD1-201ENST00000342245 SPTAN1Q13813 2472 aaKnown RBP12.63□□□□□ -0.39
SMPD1-201ENST00000342245 KIAA0087Q14695 138 aa12.63□□□□□ -0.39
SMPD1-201ENST00000342245 CCL19Q99731 98 aa12.62□□□□□ -0.39
SMPD1-201ENST00000342245 HIGD2AQ9BW72 106 aa12.61□□□□□ -0.39
SMPD1-201ENST00000342245 Q6ZRP5 223 aa12.6□□□□□ -0.39
SMPD1-201ENST00000342245 COL12A1Q99715 3063 aa12.6□□□□□ -0.39
SMPD1-201ENST00000342245 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
SMPD1-201ENST00000342245 ODF3L2Q3SX64 289 aa12.59□□□□□ -0.39
SMPD1-201ENST00000342245 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
SMPD1-201ENST00000342245 LCE6AA0A183 80 aa12.57□□□□□ -0.4
SMPD1-201ENST00000342245 Q8NDZ9 215 aa12.56□□□□□ -0.4
SMPD1-201ENST00000342245 DEFB136Q30KP8 78 aa12.55□□□□□ -0.4
SMPD1-201ENST00000342245 KHDC1LQ5JSQ8 128 aa12.54□□□□□ -0.4
SMPD1-201ENST00000342245 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
SMPD1-201ENST00000342245 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
SMPD1-201ENST00000342245 B4DSR2 109 aa12.54□□□□□ -0.4
SMPD1-201ENST00000342245 LYRM9A8MSI8 78 aa12.53□□□□□ -0.4
SMPD1-201ENST00000342245 C1orf64Q8NEQ6 169 aa12.53□□□□□ -0.4
SMPD1-201ENST00000342245 SPG11Q96JI7 2443 aa12.52□□□□□ -0.4
SMPD1-201ENST00000342245 CMC4P56277 68 aaPredicted RBP12.52□□□□□ -0.41
SMPD1-201ENST00000342245 MAP1AP78559 2803 aaPredicted RBP12.52□□□□□ -0.41
SMPD1-201ENST00000342245 LINC00269Q8N2A0 174 aa12.51□□□□□ -0.41
SMPD1-201ENST00000342245 LINC01006Q8NI28 216 aa12.51□□□□□ -0.41
SMPD1-201ENST00000342245 C9orf116Q5BN46 136 aaPredicted RBP12.51□□□□□ -0.41
SMPD1-201ENST00000342245 ESM1Q9NQ30 184 aa12.51□□□□□ -0.41
SMPD1-201ENST00000342245 ELOF1P60002 83 aaKnown RBP12.5□□□□□ -0.41
SMPD1-201ENST00000342245 Q8N9L7 120 aa12.5□□□□□ -0.41
SMPD1-201ENST00000342245 CYP4F30PQ9H0H9 118 aa12.5□□□□□ -0.41
SMPD1-201ENST00000342245 HIGD2BQ4VC39 106 aa12.5□□□□□ -0.41
SMPD1-201ENST00000342245 C18orf65Q6ZTR6 163 aa12.5□□□□□ -0.41
SMPD1-201ENST00000342245 PKD1L2Q7Z442 2459 aa12.49□□□□□ -0.41
SMPD1-201ENST00000342245 TRAV22A0A0B4J277 110 aa12.49□□□□□ -0.41
SMPD1-201ENST00000342245 RETNQ9HD89 108 aa12.49□□□□□ -0.41
SMPD1-201ENST00000342245 CELA1Q9UNI1 258 aa12.49□□□□□ -0.41
SMPD1-201ENST00000342245 A0A0J9YWU9 116 aa12.49□□□□□ -0.41
SMPD1-201ENST00000342245 A0A1B0GW54 56 aa12.49□□□□□ -0.41
SMPD1-201ENST00000342245 IGHV4-30-4P0DP06 118 aa12.49□□□□□ -0.41
SMPD1-201ENST00000342245 CELSR2Q9HCU4 2923 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms