RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 LINC00959A0A1B0GUT2 108 aa13.94□□□□□ -0.18
SPG7-202ENST00000341316 IGHV4-28A0A0C4DH34 117 aa13.93□□□□□ -0.18
SPG7-202ENST00000341316 LYRM9A8MSI8 78 aa13.93□□□□□ -0.18
SPG7-202ENST00000341316 TRACP01848 142 aa13.93□□□□□ -0.18
SPG7-202ENST00000341316 FLNBO75369 2602 aaKnown RBP13.93□□□□□ -0.18
SPG7-202ENST00000341316 A0A087WZ39 114 aa13.93□□□□□ -0.18
SPG7-202ENST00000341316 PAX4O43316 350 aa13.92□□□□□ -0.18
SPG7-202ENST00000341316 F8P00451 2351 aa13.92□□□□□ -0.18
SPG7-202ENST00000341316 BAALC-AS2P0C853 105 aa13.92□□□□□ -0.18
SPG7-202ENST00000341316 MIR7-3HGQ8N6C7 128 aa13.91□□□□□ -0.18
SPG7-202ENST00000341316 APOC4P55056 127 aa13.9□□□□□ -0.18
SPG7-202ENST00000341316 PPDPFQ9H3Y8 114 aa13.9□□□□□ -0.18
SPG7-202ENST00000341316 CELA1Q9UNI1 258 aa13.9□□□□□ -0.18
SPG7-202ENST00000341316 TRBV7-7A0A0K0K1E9 115 aa13.9□□□□□ -0.18
SPG7-202ENST00000341316 CLPSL2Q6UWE3 100 aa13.9□□□□□ -0.18
SPG7-202ENST00000341316 C22orf24Q9Y442 160 aa13.9□□□□□ -0.18
SPG7-202ENST00000341316 ACYP1P07311 99 aa13.89□□□□□ -0.19
SPG7-202ENST00000341316 A0A1B0GUV1 79 aa13.89□□□□□ -0.19
SPG7-202ENST00000341316 CRPP02741 224 aa13.89□□□□□ -0.19
SPG7-202ENST00000341316 LINC00337Q8N6G1 96 aa13.89□□□□□ -0.19
SPG7-202ENST00000341316 Q8NAQ8 132 aa13.89□□□□□ -0.19
SPG7-202ENST00000341316 TRAV13-2A0A0B4J235 113 aa13.88□□□□□ -0.19
SPG7-202ENST00000341316 XCL1P47992 114 aa13.88□□□□□ -0.19
SPG7-202ENST00000341316 SMCR5Q8TEV8 140 aa13.88□□□□□ -0.19
SPG7-202ENST00000341316 IGKV2-28A0A075B6P5 120 aa13.87□□□□□ -0.19
SPG7-202ENST00000341316 IGKV2D-28P01615 120 aa13.87□□□□□ -0.19
SPG7-202ENST00000341316 Q8N3U1 123 aa13.87□□□□□ -0.19
SPG7-202ENST00000341316 RPL28P46779 137 aaKnown RBP13.87□□□□□ -0.19
SPG7-202ENST00000341316 WFDC9Q8NEX5 89 aa13.87□□□□□ -0.19
SPG7-202ENST00000341316 Q9HAA7 133 aa13.87□□□□□ -0.19
SPG7-202ENST00000341316 SND1-IT1Q9HBX3 110 aa13.87□□□□□ -0.19
SPG7-202ENST00000341316 DAD1P61803 113 aa13.86□□□□□ -0.19
SPG7-202ENST00000341316 LINC00158P58513 81 aa13.85□□□□□ -0.19
SPG7-202ENST00000341316 IGHV4-30-4P0DP06 118 aa13.84□□□□□ -0.19
SPG7-202ENST00000341316 C11orf68Q9H3H3 251 aaKnown RBP13.84□□□□□ -0.19
SPG7-202ENST00000341316 SS18Q15532 418 aa13.83□□□□□ -0.2
SPG7-202ENST00000341316 MIFP14174 115 aa13.82□□□□□ -0.2
SPG7-202ENST00000341316 PFN2P35080 140 aa13.82□□□□□ -0.2
SPG7-202ENST00000341316 LINC00269Q8N2A0 174 aa13.82□□□□□ -0.2
SPG7-202ENST00000341316 MALP21145 153 aa13.81□□□□□ -0.2
SPG7-202ENST00000341316 CCL18P55774 89 aa13.81□□□□□ -0.2
SPG7-202ENST00000341316 SMIM11BQ8TCY0 68 aa13.81□□□□□ -0.2
SPG7-202ENST00000341316 IBA57-AS1B1ANH7 110 aa13.81□□□□□ -0.2
SPG7-202ENST00000341316 WIPF1O43516 503 aa13.8□□□□□ -0.2
SPG7-202ENST00000341316 C6orf226Q5I0X4 101 aa13.8□□□□□ -0.2
SPG7-202ENST00000341316 LINC00643Q86TS7 51 aa13.8□□□□□ -0.2
SPG7-202ENST00000341316 A0A087WYN8 130 aa13.8□□□□□ -0.2
SPG7-202ENST00000341316 ATP5G1P05496 136 aa13.8□□□□□ -0.2
SPG7-202ENST00000341316 FAM236AA0A1B0GUQ0 79 aa13.79□□□□□ -0.2
SPG7-202ENST00000341316 FAM236BA0A1B0GV22 79 aa13.79□□□□□ -0.2
SPG7-202ENST00000341316 HTN3P15516 51 aa13.79□□□□□ -0.2
SPG7-202ENST00000341316 IMUPQ9GZP8 106 aa13.79□□□□□ -0.2
SPG7-202ENST00000341316 ANK2Q01484 3957 aa13.79□□□□□ -0.2
SPG7-202ENST00000341316 INAFM2P0DMQ5 153 aa13.78□□□□□ -0.2
SPG7-202ENST00000341316 SPART-AS1P0CW21 52 aa13.78□□□□□ -0.2
SPG7-202ENST00000341316 GAGE2AQ6NT46 116 aa13.78□□□□□ -0.2
SPG7-202ENST00000341316 SDIM1Q6ZPB5 146 aa13.78□□□□□ -0.2
SPG7-202ENST00000341316 PKD1L1Q8TDX9 2849 aa13.77□□□□□ -0.2
SPG7-202ENST00000341316 IGLV10-54A0A075B6I4 117 aa13.77□□□□□ -0.21
SPG7-202ENST00000341316 ANGP03950 147 aaKnown RBP13.76□□□□□ -0.21
SPG7-202ENST00000341316 STAB1Q9NY15 2570 aa13.76□□□□□ -0.21
SPG7-202ENST00000341316 FBN1P35555 2871 aaKnown RBP13.76□□□□□ -0.21
SPG7-202ENST00000341316 DNAL4O96015 105 aa13.76□□□□□ -0.21
SPG7-202ENST00000341316 Q8IZM0 81 aa13.76□□□□□ -0.21
SPG7-202ENST00000341316 REG3AQ06141 175 aa13.75□□□□□ -0.21
SPG7-202ENST00000341316 OXLD1Q5BKU9 147 aa13.75□□□□□ -0.21
SPG7-202ENST00000341316 CHCHD10Q8WYQ3 142 aaPredicted RBP13.75□□□□□ -0.21
SPG7-202ENST00000341316 C9orf129Q5T035 196 aaKnown RBP13.74□□□□□ -0.21
SPG7-202ENST00000341316 CD164L2Q6UWJ8 174 aa13.74□□□□□ -0.21
SPG7-202ENST00000341316 CMYA5Q8N3K9 4069 aa13.73□□□□□ -0.21
SPG7-202ENST00000341316 H0YGX0 51 aa13.73□□□□□ -0.21
SPG7-202ENST00000341316 KIAA0087Q14695 138 aa13.73□□□□□ -0.21
SPG7-202ENST00000341316 LINC01561Q8N1V8 128 aa13.73□□□□□ -0.21
SPG7-202ENST00000341316 KRTAP10-11P60412 298 aa13.72□□□□□ -0.21
SPG7-202ENST00000341316 OR13C6PQ8NH95 151 aa13.71□□□□□ -0.21
SPG7-202ENST00000341316 LECT2O14960 151 aa13.7□□□□□ -0.22
SPG7-202ENST00000341316 RETNQ9HD89 108 aa13.7□□□□□ -0.22
SPG7-202ENST00000341316 C14orf132Q9NPU4 83 aa13.7□□□□□ -0.22
SPG7-202ENST00000341316 C3orf56Q8N813 242 aa13.69□□□□□ -0.22
SPG7-202ENST00000341316 LELP1Q5T871 98 aa13.69□□□□□ -0.22
SPG7-202ENST00000341316 CXCL5P42830 114 aa13.66□□□□□ -0.22
SPG7-202ENST00000341316 SLPIP03973 132 aa13.66□□□□□ -0.22
SPG7-202ENST00000341316 SVIPQ8NHG7 77 aa13.66□□□□□ -0.22
SPG7-202ENST00000341316 C9orf116Q5BN46 136 aaPredicted RBP13.65□□□□□ -0.22
SPG7-202ENST00000341316 OBSCN-AS1Q96MR7 158 aa13.65□□□□□ -0.22
SPG7-202ENST00000341316 KRTAP24-1Q3LI83 254 aa13.65□□□□□ -0.22
SPG7-202ENST00000341316 MAST4O15021 2626 aa13.65□□□□□ -0.22
SPG7-202ENST00000341316 TENM3Q9P273 2699 aa13.64□□□□□ -0.23
SPG7-202ENST00000341316 NCR3O14931 201 aa13.64□□□□□ -0.23
SPG7-202ENST00000341316 PRR3P79522 188 aaKnown RBP13.64□□□□□ -0.23
SPG7-202ENST00000341316 CFAP161Q6P656 301 aa13.64□□□□□ -0.23
SPG7-202ENST00000341316 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
SPG7-202ENST00000341316 KLK5Q9Y337 293 aaPredicted RBP13.63□□□□□ -0.23
SPG7-202ENST00000341316 LYPD5Q6UWN5 251 aa13.62□□□□□ -0.23
SPG7-202ENST00000341316 SMIM20Q8N5G0 67 aa13.62□□□□□ -0.23
SPG7-202ENST00000341316 ENHOQ6UWT2 76 aa13.61□□□□□ -0.23
SPG7-202ENST00000341316 C6orf223Q8N319 242 aa13.61□□□□□ -0.23
SPG7-202ENST00000341316 PRR34Q9NV39 138 aa13.61□□□□□ -0.23
SPG7-202ENST00000341316 LINC00526Q96FQ7 95 aa13.61□□□□□ -0.23
SPG7-202ENST00000341316 C3orf22Q8N5N4 141 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms