RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 TRBV10-1A0A0K0K1A3 114 aa10.75□□□□□ -0.69
PERM1-201ENST00000341290 WIPF1O43516 503 aa10.75□□□□□ -0.69
PERM1-201ENST00000341290 GIG44P09565 113 aaPredicted RBP10.75□□□□□ -0.69
PERM1-201ENST00000341290 C5orf38Q86SI9 138 aa10.75□□□□□ -0.69
PERM1-201ENST00000341290 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
PERM1-201ENST00000341290 A0A087WVE0 104 aa10.74□□□□□ -0.69
PERM1-201ENST00000341290 SND1-IT1Q9HBX3 110 aa10.74□□□□□ -0.69
PERM1-201ENST00000341290 ATP5G1P05496 136 aa10.74□□□□□ -0.69
PERM1-201ENST00000341290 RPS28P62857 69 aaKnown RBP10.74□□□□□ -0.69
PERM1-201ENST00000341290 COX7B2Q8TF08 81 aa10.74□□□□□ -0.69
PERM1-201ENST00000341290 C22orf24Q9Y442 160 aa10.74□□□□□ -0.69
PERM1-201ENST00000341290 DNAJC9-AS1A6NH13 148 aa10.74□□□□□ -0.69
PERM1-201ENST00000341290 CRPP02741 224 aa10.74□□□□□ -0.69
PERM1-201ENST00000341290 HILS1P60008 231 aa10.74□□□□□ -0.69
PERM1-201ENST00000341290 IGKV2-28A0A075B6P5 120 aa10.73□□□□□ -0.69
PERM1-201ENST00000341290 IGKV2D-28P01615 120 aa10.73□□□□□ -0.69
PERM1-201ENST00000341290 ATOX1O00244 68 aa10.73□□□□□ -0.69
PERM1-201ENST00000341290 RNASE1P07998 156 aaKnown RBP10.73□□□□□ -0.69
PERM1-201ENST00000341290 C9orf129Q5T035 196 aaKnown RBP10.73□□□□□ -0.69
PERM1-201ENST00000341290 ESM1Q9NQ30 184 aa10.73□□□□□ -0.69
PERM1-201ENST00000341290 A0A087WYN8 130 aa10.72□□□□□ -0.69
PERM1-201ENST00000341290 PLAC8L1A1L4L8 177 aa10.72□□□□□ -0.69
PERM1-201ENST00000341290 COPS9Q8WXC6 57 aa10.72□□□□□ -0.69
PERM1-201ENST00000341290 CLPSL2Q6UWE3 100 aa10.71□□□□□ -0.69
PERM1-201ENST00000341290 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
PERM1-201ENST00000341290 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
PERM1-201ENST00000341290 FAM19A3Q7Z5A8 133 aa10.71□□□□□ -0.7
PERM1-201ENST00000341290 C16orf95Q9H693 158 aa10.71□□□□□ -0.7
PERM1-201ENST00000341290 FLNBO75369 2602 aaKnown RBP10.7□□□□□ -0.7
PERM1-201ENST00000341290 CXCL5P42830 114 aa10.7□□□□□ -0.7
PERM1-201ENST00000341290 SMIM11BQ8TCY0 68 aa10.7□□□□□ -0.7
PERM1-201ENST00000341290 A0A096LPF7 62 aa10.69□□□□□ -0.7
PERM1-201ENST00000341290 SLPIP03973 132 aa10.69□□□□□ -0.7
PERM1-201ENST00000341290 INAFM1C9JVW0 142 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 PAX4O43316 350 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 CCL18P55774 89 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 RPL18AQ02543 176 aaKnown RBP10.68□□□□□ -0.7
PERM1-201ENST00000341290 HIVEP1P15822 2718 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 TRAV13-2A0A0B4J235 113 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 MALP21145 153 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 C14orf132Q9NPU4 83 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 TMEM258P61165 79 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 Q5XG85 94 aa10.68□□□□□ -0.7
PERM1-201ENST00000341290 DNAL4O96015 105 aa10.67□□□□□ -0.7
PERM1-201ENST00000341290 XCL1P47992 114 aa10.67□□□□□ -0.7
PERM1-201ENST00000341290 C16orf74Q96GX8 76 aa10.67□□□□□ -0.7
PERM1-201ENST00000341290 VWFP04275 2813 aa10.66□□□□□ -0.7
PERM1-201ENST00000341290 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
PERM1-201ENST00000341290 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
PERM1-201ENST00000341290 HIST1H4AP62805 103 aaKnown RBP10.66□□□□□ -0.7
PERM1-201ENST00000341290 IGHV3OR16-9A0A0B4J2B5 98 aa10.66□□□□□ -0.7
PERM1-201ENST00000341290 LECT2O14960 151 aa10.65□□□□□ -0.7
PERM1-201ENST00000341290 FHL2Q14192 279 aa10.65□□□□□ -0.71
PERM1-201ENST00000341290 SERP2Q8N6R1 65 aa10.65□□□□□ -0.71
PERM1-201ENST00000341290 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
PERM1-201ENST00000341290 PRR3P79522 188 aaKnown RBP10.64□□□□□ -0.71
PERM1-201ENST00000341290 C6orf226Q5I0X4 101 aa10.64□□□□□ -0.71
PERM1-201ENST00000341290 NCR3O14931 201 aa10.63□□□□□ -0.71
PERM1-201ENST00000341290 NSD1Q96L73 2696 aaPredicted RBP10.63□□□□□ -0.71
PERM1-201ENST00000341290 LINC01006Q8NI28 216 aa10.63□□□□□ -0.71
PERM1-201ENST00000341290 UPK3BQ9BT76 320 aa10.63□□□□□ -0.71
PERM1-201ENST00000341290 INAFM2P0DMQ5 153 aa10.62□□□□□ -0.71
PERM1-201ENST00000341290 CSNK1G2-AS1Q8NCQ2 148 aa10.62□□□□□ -0.71
PERM1-201ENST00000341290 USP17L23D6RBM5 183 aa10.61□□□□□ -0.71
PERM1-201ENST00000341290 C19orf73Q9NVV2 129 aa10.61□□□□□ -0.71
PERM1-201ENST00000341290 LINC00846Q9NV44 126 aa10.61□□□□□ -0.71
PERM1-201ENST00000341290 LINC00959A0A1B0GUT2 108 aa10.6□□□□□ -0.71
PERM1-201ENST00000341290 LINC01561Q8N1V8 128 aa10.6□□□□□ -0.71
PERM1-201ENST00000341290 A0A087WZ39 114 aa10.6□□□□□ -0.71
PERM1-201ENST00000341290 PF4P02776 101 aa10.6□□□□□ -0.71
PERM1-201ENST00000341290 GYPEP15421 78 aa10.6□□□□□ -0.71
PERM1-201ENST00000341290 WFDC9Q8NEX5 89 aa10.6□□□□□ -0.71
PERM1-201ENST00000341290 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
PERM1-201ENST00000341290 IGLV10-54A0A075B6I4 117 aa10.58□□□□□ -0.72
PERM1-201ENST00000341290 DEFB4AO15263 64 aa10.58□□□□□ -0.72
PERM1-201ENST00000341290 Q8N3U1 123 aa10.58□□□□□ -0.72
PERM1-201ENST00000341290 IBA57-AS1B1ANH7 110 aa10.58□□□□□ -0.72
PERM1-201ENST00000341290 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
PERM1-201ENST00000341290 OVOL2Q9BRP0 275 aa10.58□□□□□ -0.72
PERM1-201ENST00000341290 C1orf43Q9BWL3 253 aa10.57□□□□□ -0.72
PERM1-201ENST00000341290 PKIGQ9Y2B9 76 aa10.56□□□□□ -0.72
PERM1-201ENST00000341290 C9orf116Q5BN46 136 aaPredicted RBP10.56□□□□□ -0.72
PERM1-201ENST00000341290 LINC00336Q6ZUF6 198 aa10.55□□□□□ -0.72
PERM1-201ENST00000341290 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
PERM1-201ENST00000341290 F8P00451 2351 aa10.54□□□□□ -0.72
PERM1-201ENST00000341290 H0YGX0 51 aa10.54□□□□□ -0.72
PERM1-201ENST00000341290 C20orf197Q8N268 126 aa10.53□□□□□ -0.72
PERM1-201ENST00000341290 MRAPQ8TCY5 172 aa10.53□□□□□ -0.72
PERM1-201ENST00000341290 ATRQ13535 2644 aa10.53□□□□□ -0.72
PERM1-201ENST00000341290 GHRHP01286 108 aa10.52□□□□□ -0.72
PERM1-201ENST00000341290 SS18Q15532 418 aa10.52□□□□□ -0.72
PERM1-201ENST00000341290 Q6JHZ5 121 aa10.52□□□□□ -0.72
PERM1-201ENST00000341290 LINC00269Q8N2A0 174 aa10.52□□□□□ -0.72
PERM1-201ENST00000341290 LINC00482Q8N8I6 264 aa10.51□□□□□ -0.73
PERM1-201ENST00000341290 TEP1Q99973 2627 aaKnown RBP10.5□□□□□ -0.73
PERM1-201ENST00000341290 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
PERM1-201ENST00000341290 ORMDL1Q9P0S3 153 aa10.5□□□□□ -0.73
PERM1-201ENST00000341290 FAM19A1Q7Z5A9 133 aa10.48□□□□□ -0.73
PERM1-201ENST00000341290 SPATA3Q8NHX4 192 aa10.48□□□□□ -0.73
PERM1-201ENST00000341290 ANGP03950 147 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms