RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 C4orf3Q8WVX3 66 aa8.43□□□□□ -1.06
CCDC144CP-201ENST00000340196 SLPIP03973 132 aa8.43□□□□□ -1.06
CCDC144CP-201ENST00000340196 ACYP1P07311 99 aa8.43□□□□□ -1.06
CCDC144CP-201ENST00000340196 TRGV2A0A075B6R0 118 aa8.42□□□□□ -1.06
CCDC144CP-201ENST00000340196 UBE2L6O14933 153 aa8.42□□□□□ -1.06
CCDC144CP-201ENST00000340196 VWFP04275 2813 aa8.42□□□□□ -1.06
CCDC144CP-201ENST00000340196 CLPSL2Q6UWE3 100 aa8.42□□□□□ -1.06
CCDC144CP-201ENST00000340196 C14orf132Q9NPU4 83 aa8.42□□□□□ -1.06
CCDC144CP-201ENST00000340196 LINC00158P58513 81 aa8.41□□□□□ -1.06
CCDC144CP-201ENST00000340196 IL17DQ8TAD2 202 aa8.41□□□□□ -1.06
CCDC144CP-201ENST00000340196 SND1-IT1Q9HBX3 110 aa8.41□□□□□ -1.06
CCDC144CP-201ENST00000340196 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
CCDC144CP-201ENST00000340196 MRAPQ8TCY5 172 aa8.41□□□□□ -1.06
CCDC144CP-201ENST00000340196 SMIM11BQ8TCY0 68 aa8.4□□□□□ -1.06
CCDC144CP-201ENST00000340196 CRPP02741 224 aa8.4□□□□□ -1.06
CCDC144CP-201ENST00000340196 SDIM1Q6ZPB5 146 aa8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 A0A096LPF7 62 aa8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 PLAC8L1A1L4L8 177 aa8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 TMEM258P61165 79 aa8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 FASNP49327 2511 aaKnown RBP8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 CCL18P55774 89 aa8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 HIST1H4AP62805 103 aaKnown RBP8.39□□□□□ -1.07
CCDC144CP-201ENST00000340196 IGKV3D-7A0A0C4DH55 119 aa8.38□□□□□ -1.07
CCDC144CP-201ENST00000340196 ATOX1O00244 68 aa8.38□□□□□ -1.07
CCDC144CP-201ENST00000340196 MALP21145 153 aa8.38□□□□□ -1.07
CCDC144CP-201ENST00000340196 CXCL5P42830 114 aa8.38□□□□□ -1.07
CCDC144CP-201ENST00000340196 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
CCDC144CP-201ENST00000340196 HECTD1Q9ULT8 2610 aa8.38□□□□□ -1.07
CCDC144CP-201ENST00000340196 A0A087WVE0 104 aa8.38□□□□□ -1.07
CCDC144CP-201ENST00000340196 NCR3O14931 201 aa8.38□□□□□ -1.07
CCDC144CP-201ENST00000340196 LECT2O14960 151 aa8.37□□□□□ -1.07
CCDC144CP-201ENST00000340196 UPK3BQ9BT76 320 aa8.37□□□□□ -1.07
CCDC144CP-201ENST00000340196 TRGV4A0A0C4DH28 118 aa8.36□□□□□ -1.07
CCDC144CP-201ENST00000340196 DNAJC9-AS1A6NH13 148 aa8.36□□□□□ -1.07
CCDC144CP-201ENST00000340196 CCL24O00175 119 aa8.36□□□□□ -1.07
CCDC144CP-201ENST00000340196 ESM1Q9NQ30 184 aa8.36□□□□□ -1.07
CCDC144CP-201ENST00000340196 DEFB130BP0DP73 79 aa8.36□□□□□ -1.07
CCDC144CP-201ENST00000340196 DEFB130AP0DP74 79 aa8.36□□□□□ -1.07
CCDC144CP-201ENST00000340196 TRBV10-1A0A0K0K1A3 114 aa8.35□□□□□ -1.07
CCDC144CP-201ENST00000340196 PAX4O43316 350 aa8.35□□□□□ -1.07
CCDC144CP-201ENST00000340196 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
CCDC144CP-201ENST00000340196 FAM19A3Q7Z5A8 133 aa8.35□□□□□ -1.07
CCDC144CP-201ENST00000340196 RPL28P46779 137 aaKnown RBP8.35□□□□□ -1.07
CCDC144CP-201ENST00000340196 XCL1P47992 114 aa8.35□□□□□ -1.07
CCDC144CP-201ENST00000340196 RPL18AQ02543 176 aaKnown RBP8.35□□□□□ -1.07
CCDC144CP-201ENST00000340196 Q8N3U1 123 aa8.35□□□□□ -1.07
CCDC144CP-201ENST00000340196 F8WDY8 70 aa8.34□□□□□ -1.07
CCDC144CP-201ENST00000340196 DNAL4O96015 105 aa8.34□□□□□ -1.07
CCDC144CP-201ENST00000340196 C1orf43Q9BWL3 253 aa8.34□□□□□ -1.07
CCDC144CP-201ENST00000340196 ANK3Q12955 4377 aaKnown RBP8.34□□□□□ -1.07
CCDC144CP-201ENST00000340196 IGHV3OR16-9A0A0B4J2B5 98 aa8.34□□□□□ -1.07
CCDC144CP-201ENST00000340196 LINC00846Q9NV44 126 aa8.34□□□□□ -1.07
CCDC144CP-201ENST00000340196 TRAV13-2A0A0B4J235 113 aa8.33□□□□□ -1.08
CCDC144CP-201ENST00000340196 SERP2Q8N6R1 65 aa8.33□□□□□ -1.08
CCDC144CP-201ENST00000340196 HIVEP2P31629 2446 aa8.33□□□□□ -1.08
CCDC144CP-201ENST00000340196 PKIGQ9Y2B9 76 aa8.33□□□□□ -1.08
CCDC144CP-201ENST00000340196 RNASE1P07998 156 aaKnown RBP8.32□□□□□ -1.08
CCDC144CP-201ENST00000340196 WFDC9Q8NEX5 89 aa8.32□□□□□ -1.08
CCDC144CP-201ENST00000340196 PRO0628Q9UI54 55 aa8.32□□□□□ -1.08
CCDC144CP-201ENST00000340196 OTOGQ6ZRI0 2925 aa8.31□□□□□ -1.08
CCDC144CP-201ENST00000340196 TRBV6-8A0A0A6YYG3 113 aa8.31□□□□□ -1.08
CCDC144CP-201ENST00000340196 FHL2Q14192 279 aa8.31□□□□□ -1.08
CCDC144CP-201ENST00000340196 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
CCDC144CP-201ENST00000340196 C16orf95Q9H693 158 aa8.31□□□□□ -1.08
CCDC144CP-201ENST00000340196 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
CCDC144CP-201ENST00000340196 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
CCDC144CP-201ENST00000340196 HILS1P60008 231 aa8.3□□□□□ -1.08
CCDC144CP-201ENST00000340196 MDFIQ99750 246 aa8.3□□□□□ -1.08
CCDC144CP-201ENST00000340196 C6orf226Q5I0X4 101 aa8.3□□□□□ -1.08
CCDC144CP-201ENST00000340196 SMR3AQ99954 134 aa8.3□□□□□ -1.08
CCDC144CP-201ENST00000340196 DEFB4AO15263 64 aa8.29□□□□□ -1.08
CCDC144CP-201ENST00000340196 LY6G6DO95868 133 aa8.29□□□□□ -1.08
CCDC144CP-201ENST00000340196 INAFM2P0DMQ5 153 aa8.29□□□□□ -1.08
CCDC144CP-201ENST00000340196 SS18Q15532 418 aa8.29□□□□□ -1.08
CCDC144CP-201ENST00000340196 FAM222AQ5U5X8 452 aa8.29□□□□□ -1.08
CCDC144CP-201ENST00000340196 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
CCDC144CP-201ENST00000340196 CSNK1G2-AS1Q8NCQ2 148 aa8.29□□□□□ -1.08
CCDC144CP-201ENST00000340196 C19orf73Q9NVV2 129 aa8.29□□□□□ -1.08
CCDC144CP-201ENST00000340196 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
CCDC144CP-201ENST00000340196 C16orf74Q96GX8 76 aa8.28□□□□□ -1.08
CCDC144CP-201ENST00000340196 TRBV6-4A0A1B0GX49 114 aa8.28□□□□□ -1.08
CCDC144CP-201ENST00000340196 NOTCH2Q04721 2471 aa8.27□□□□□ -1.08
CCDC144CP-201ENST00000340196 A0A087WZ39 114 aa8.27□□□□□ -1.09
CCDC144CP-201ENST00000340196 USP17L23D6RBM5 183 aa8.27□□□□□ -1.09
CCDC144CP-201ENST00000340196 Q8NDZ9 215 aa8.27□□□□□ -1.09
CCDC144CP-201ENST00000340196 GYPEP15421 78 aa8.27□□□□□ -1.09
CCDC144CP-201ENST00000340196 LINC01006Q8NI28 216 aa8.27□□□□□ -1.09
CCDC144CP-201ENST00000340196 TRRAPQ9Y4A5 3859 aa8.27□□□□□ -1.09
CCDC144CP-201ENST00000340196 TENM1Q9UKZ4 2725 aa8.26□□□□□ -1.09
CCDC144CP-201ENST00000340196 IBA57-AS1B1ANH7 110 aa8.25□□□□□ -1.09
CCDC144CP-201ENST00000340196 NANOS2P60321 138 aaKnown RBP8.25□□□□□ -1.09
CCDC144CP-201ENST00000340196 SPATA3Q8NHX4 192 aa8.25□□□□□ -1.09
CCDC144CP-201ENST00000340196 SEC61GP60059 68 aa8.24□□□□□ -1.09
CCDC144CP-201ENST00000340196 ZNF561-AS1K7EIQ3 104 aa8.23□□□□□ -1.09
CCDC144CP-201ENST00000340196 LINC00269Q8N2A0 174 aa8.22□□□□□ -1.09
CCDC144CP-201ENST00000340196 FAM236DA0A1B0GTK5 79 aa8.22□□□□□ -1.09
CCDC144CP-201ENST00000340196 IGLV1-51P01701 117 aa8.22□□□□□ -1.09
CCDC144CP-201ENST00000340196 FAM236CP0DP71 79 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms