RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TRBV6-4A0A1B0GX49 114 aa10.1□□□□□ -0.79
EPHB3-201ENST00000330394 C3orf84H3BNL1 204 aa10.1□□□□□ -0.79
EPHB3-201ENST00000330394 LINC00337Q8N6G1 96 aa10.1□□□□□ -0.79
EPHB3-201ENST00000330394 HILS1P60008 231 aa10.1□□□□□ -0.79
EPHB3-201ENST00000330394 PDE6GP18545 87 aa10.09□□□□□ -0.79
EPHB3-201ENST00000330394 SBSPONQ8IVN8 264 aa10.09□□□□□ -0.79
EPHB3-201ENST00000330394 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
EPHB3-201ENST00000330394 CCKP06307 115 aa10.09□□□□□ -0.79
EPHB3-201ENST00000330394 ODF3L2Q3SX64 289 aa10.09□□□□□ -0.79
EPHB3-201ENST00000330394 TRBV7-7A0A0K0K1E9 115 aa10.08□□□□□ -0.8
EPHB3-201ENST00000330394 PRR4Q16378 134 aa10.08□□□□□ -0.8
EPHB3-201ENST00000330394 DNAJC9-AS1A6NH13 148 aa10.08□□□□□ -0.8
EPHB3-201ENST00000330394 LINC00482Q8N8I6 264 aa10.08□□□□□ -0.8
EPHB3-201ENST00000330394 CDK2AP2O75956 126 aa10.06□□□□□ -0.8
EPHB3-201ENST00000330394 CSDC2Q9Y534 153 aaKnown RBP10.06□□□□□ -0.8
EPHB3-201ENST00000330394 A8MTW9 85 aa10.06□□□□□ -0.8
EPHB3-201ENST00000330394 C1orf158Q8N1D5 194 aa10.06□□□□□ -0.8
EPHB3-201ENST00000330394 KALRNO60229 2985 aa10.06□□□□□ -0.8
EPHB3-201ENST00000330394 UBE2DNLQ8IWF7 75 aa10.06□□□□□ -0.8
EPHB3-201ENST00000330394 PLA2G2AP14555 144 aa10.05□□□□□ -0.8
EPHB3-201ENST00000330394 FAM218AQ96MZ4 157 aa10.05□□□□□ -0.8
EPHB3-201ENST00000330394 SOSTDC1Q6X4U4 206 aa10.05□□□□□ -0.8
EPHB3-201ENST00000330394 NTM-AS1Q6ZSK4 140 aa10.05□□□□□ -0.8
EPHB3-201ENST00000330394 NHLRC4P0CG21 123 aaPredicted RBP10.05□□□□□ -0.8
EPHB3-201ENST00000330394 ZNF292O60281 2723 aa10.04□□□□□ -0.8
EPHB3-201ENST00000330394 IGHV4-31P0DP07 118 aa10.04□□□□□ -0.8
EPHB3-201ENST00000330394 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
EPHB3-201ENST00000330394 LRCOL1A6NCL2 159 aa10.03□□□□□ -0.8
EPHB3-201ENST00000330394 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
EPHB3-201ENST00000330394 KIR2DL5BQ8NHK3 375 aa10.03□□□□□ -0.8
EPHB3-201ENST00000330394 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
EPHB3-201ENST00000330394 MP68P56378 58 aa10.02□□□□□ -0.81
EPHB3-201ENST00000330394 Q8N814 137 aa10.02□□□□□ -0.81
EPHB3-201ENST00000330394 FLNBO75369 2602 aaKnown RBP10.02□□□□□ -0.81
EPHB3-201ENST00000330394 LOC400499M0QZD8 3231 aa10.01□□□□□ -0.81
EPHB3-201ENST00000330394 NDUFS5O43920 106 aa10.01□□□□□ -0.81
EPHB3-201ENST00000330394 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
EPHB3-201ENST00000330394 DMXL2Q8TDJ6 3036 aa10.01□□□□□ -0.81
EPHB3-201ENST00000330394 IGKV2-28A0A075B6P5 120 aa10.01□□□□□ -0.81
EPHB3-201ENST00000330394 IGKV2D-28P01615 120 aa10.01□□□□□ -0.81
EPHB3-201ENST00000330394 WDFY3Q8IZQ1 3526 aa10.01□□□□□ -0.81
EPHB3-201ENST00000330394 CELA1Q9UNI1 258 aa10□□□□□ -0.81
EPHB3-201ENST00000330394 A0A087WZ39 114 aa10□□□□□ -0.81
EPHB3-201ENST00000330394 A0A096LNI7 61 aa9.99□□□□□ -0.81
EPHB3-201ENST00000330394 FAM19A4Q96LR4 140 aa9.99□□□□□ -0.81
EPHB3-201ENST00000330394 H3BQ85 93 aa9.99□□□□□ -0.81
EPHB3-201ENST00000330394 Q8N3U1 123 aa9.99□□□□□ -0.81
EPHB3-201ENST00000330394 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
EPHB3-201ENST00000330394 TACC2O95359 2948 aa9.98□□□□□ -0.81
EPHB3-201ENST00000330394 SPTSSBQ8NFR3 76 aa9.98□□□□□ -0.81
EPHB3-201ENST00000330394 CYSRT1A8MQ03 144 aa9.98□□□□□ -0.81
EPHB3-201ENST00000330394 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
EPHB3-201ENST00000330394 Q8IZM0 81 aa9.98□□□□□ -0.81
EPHB3-201ENST00000330394 ZNF843Q8N446 348 aa9.98□□□□□ -0.81
EPHB3-201ENST00000330394 IGLV5-39A0A0G2JS06 123 aa9.97□□□□□ -0.81
EPHB3-201ENST00000330394 RMI2Q96E14 147 aa9.97□□□□□ -0.81
EPHB3-201ENST00000330394 TRAV7A0A075B6U4 112 aa9.96□□□□□ -0.81
EPHB3-201ENST00000330394 LITAFQ99732 161 aa9.96□□□□□ -0.81
EPHB3-201ENST00000330394 BEAN1Q3B7T3 259 aa9.96□□□□□ -0.81
EPHB3-201ENST00000330394 PRORYQ9H606 182 aa9.96□□□□□ -0.81
EPHB3-201ENST00000330394 MIFP14174 115 aa9.96□□□□□ -0.82
EPHB3-201ENST00000330394 HIGD2AQ9BW72 106 aa9.96□□□□□ -0.82
EPHB3-201ENST00000330394 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.95□□□□□ -0.82
EPHB3-201ENST00000330394 SMIM26A0A096LP01 95 aa9.95□□□□□ -0.82
EPHB3-201ENST00000330394 IGKV2-24A0A0C4DH68 120 aa9.95□□□□□ -0.82
EPHB3-201ENST00000330394 ZNF73O43830 326 aaPredicted RBP9.94□□□□□ -0.82
EPHB3-201ENST00000330394 SMCR5Q8TEV8 140 aa9.94□□□□□ -0.82
EPHB3-201ENST00000330394 TRBV10-3A0A0K0K1G6 114 aa9.94□□□□□ -0.82
EPHB3-201ENST00000330394 C4orf26Q17RF5 130 aa9.94□□□□□ -0.82
EPHB3-201ENST00000330394 CHD6Q8TD26 2715 aa9.94□□□□□ -0.82
EPHB3-201ENST00000330394 LINC01006Q8NI28 216 aa9.94□□□□□ -0.82
EPHB3-201ENST00000330394 ATMQ13315 3056 aa9.94□□□□□ -0.82
EPHB3-201ENST00000330394 COL27A1Q8IZC6 1860 aaPredicted RBP9.94□□□□□ -0.82
EPHB3-201ENST00000330394 ZZEF1O43149 2961 aa9.93□□□□□ -0.82
EPHB3-201ENST00000330394 C6orf223Q8N319 242 aa9.93□□□□□ -0.82
EPHB3-201ENST00000330394 C11orf72Q8NBR9 251 aa9.93□□□□□ -0.82
EPHB3-201ENST00000330394 CRYGAP11844 174 aa9.93□□□□□ -0.82
EPHB3-201ENST00000330394 FAM30AQ9NZY2 134 aa9.92□□□□□ -0.82
EPHB3-201ENST00000330394 WFDC10BQ8IUB3 73 aa9.92□□□□□ -0.82
EPHB3-201ENST00000330394 NDUFC1O43677 76 aa9.91□□□□□ -0.82
EPHB3-201ENST00000330394 WFDC13Q8IUB5 93 aa9.91□□□□□ -0.82
EPHB3-201ENST00000330394 Q8N9L7 120 aa9.91□□□□□ -0.82
EPHB3-201ENST00000330394 SERP1Q9Y6X1 66 aa9.91□□□□□ -0.82
EPHB3-201ENST00000330394 FHL2Q14192 279 aa9.91□□□□□ -0.82
EPHB3-201ENST00000330394 Q6ZVQ6 151 aa9.91□□□□□ -0.82
EPHB3-201ENST00000330394 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
EPHB3-201ENST00000330394 IGHV3OR16-9A0A0B4J2B5 98 aa9.9□□□□□ -0.82
EPHB3-201ENST00000330394 H0Y9J4 135 aa9.9□□□□□ -0.82
EPHB3-201ENST00000330394 KRTAP10-9P60411 292 aa9.9□□□□□ -0.82
EPHB3-201ENST00000330394 HECTD1Q9ULT8 2610 aa9.9□□□□□ -0.82
EPHB3-201ENST00000330394 BRI3O95415 125 aa9.9□□□□□ -0.82
EPHB3-201ENST00000330394 NANOS2P60321 138 aaKnown RBP9.9□□□□□ -0.83
EPHB3-201ENST00000330394 RPL37AP8A6NKH3 93 aa9.89□□□□□ -0.83
EPHB3-201ENST00000330394 V9GYY9 64 aa9.89□□□□□ -0.83
EPHB3-201ENST00000330394 A0A0J9YWU9 116 aa9.88□□□□□ -0.83
EPHB3-201ENST00000330394 ZNF575Q86XF7 245 aa9.88□□□□□ -0.83
EPHB3-201ENST00000330394 LINC01547P58512 204 aaPredicted RBP9.88□□□□□ -0.83
EPHB3-201ENST00000330394 COX17Q14061 63 aa9.87□□□□□ -0.83
EPHB3-201ENST00000330394 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
EPHB3-201ENST00000330394 C1orf195Q5TG92 126 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms