RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 XGP55808 180 aa13.79□□□□□ -0.2
PDZD3-201ENST00000322712 COX7B2Q8TF08 81 aa13.79□□□□□ -0.2
PDZD3-201ENST00000322712 MRPL23Q16540 153 aaKnown RBP13.78□□□□□ -0.2
PDZD3-201ENST00000322712 A0A087WZ39 114 aa13.78□□□□□ -0.2
PDZD3-201ENST00000322712 CKS1BP61024 79 aa13.78□□□□□ -0.2
PDZD3-201ENST00000322712 MEIG1Q5JSS6 88 aa13.78□□□□□ -0.2
PDZD3-201ENST00000322712 TRBV30A0A0K0K1B3 111 aa13.77□□□□□ -0.21
PDZD3-201ENST00000322712 CIRBPQ14011 172 aaKnown RBP13.77□□□□□ -0.21
PDZD3-201ENST00000322712 ANGP03950 147 aaKnown RBP13.76□□□□□ -0.21
PDZD3-201ENST00000322712 Q6ZTC4 211 aa13.76□□□□□ -0.21
PDZD3-201ENST00000322712 ICOSQ9Y6W8 199 aa13.76□□□□□ -0.21
PDZD3-201ENST00000322712 IGLV10-54A0A075B6I4 117 aa13.76□□□□□ -0.21
PDZD3-201ENST00000322712 TRIAP1O43715 76 aa13.76□□□□□ -0.21
PDZD3-201ENST00000322712 LINC01620Q4KN68 170 aa13.76□□□□□ -0.21
PDZD3-201ENST00000322712 SOSTDC1Q6X4U4 206 aa13.76□□□□□ -0.21
PDZD3-201ENST00000322712 LINC00308Q8TCZ7 52 aa13.75□□□□□ -0.21
PDZD3-201ENST00000322712 SS18Q15532 418 aa13.75□□□□□ -0.21
PDZD3-201ENST00000322712 C11orf68Q9H3H3 251 aaKnown RBP13.75□□□□□ -0.21
PDZD3-201ENST00000322712 A0A0J9YWU9 116 aa13.74□□□□□ -0.21
PDZD3-201ENST00000322712 HERV-K104P63124 156 aa13.72□□□□□ -0.21
PDZD3-201ENST00000322712 REG3AQ06141 175 aa13.72□□□□□ -0.21
PDZD3-201ENST00000322712 IFITM1P13164 125 aa13.71□□□□□ -0.21
PDZD3-201ENST00000322712 LELP1Q5T871 98 aa13.71□□□□□ -0.21
PDZD3-201ENST00000322712 NTN5Q8WTR8 489 aaPredicted RBP13.71□□□□□ -0.21
PDZD3-201ENST00000322712 LYPD5Q6UWN5 251 aa13.71□□□□□ -0.22
PDZD3-201ENST00000322712 TRBV10-2A0A0K0K1G8 114 aa13.7□□□□□ -0.22
PDZD3-201ENST00000322712 NANOS2P60321 138 aaKnown RBP13.7□□□□□ -0.22
PDZD3-201ENST00000322712 COX6CP09669 75 aa13.7□□□□□ -0.22
PDZD3-201ENST00000322712 CHCHD10Q8WYQ3 142 aaPredicted RBP13.7□□□□□ -0.22
PDZD3-201ENST00000322712 LINC01600Q96MT4 127 aa13.7□□□□□ -0.22
PDZD3-201ENST00000322712 KPRPQ5T749 579 aaPredicted RBP13.69□□□□□ -0.22
PDZD3-201ENST00000322712 C2orf82Q6UX34 121 aa13.67□□□□□ -0.22
PDZD3-201ENST00000322712 MIR7-3HGQ8N6C7 128 aa13.67□□□□□ -0.22
PDZD3-201ENST00000322712 C6orf226Q5I0X4 101 aa13.67□□□□□ -0.22
PDZD3-201ENST00000322712 DEFB121Q5J5C9 76 aa13.67□□□□□ -0.22
PDZD3-201ENST00000322712 KLK12Q9UKR0 248 aa13.67□□□□□ -0.22
PDZD3-201ENST00000322712 K7EIL1 84 aa13.66□□□□□ -0.22
PDZD3-201ENST00000322712 PFN2P35080 140 aa13.66□□□□□ -0.22
PDZD3-201ENST00000322712 RPL13AP40429 203 aaKnown RBP13.66□□□□□ -0.22
PDZD3-201ENST00000322712 CD164L2Q6UWJ8 174 aa13.66□□□□□ -0.22
PDZD3-201ENST00000322712 MRAPQ8TCY5 172 aa13.66□□□□□ -0.22
PDZD3-201ENST00000322712 TEX49A0A1B0GTD5 131 aa13.65□□□□□ -0.22
PDZD3-201ENST00000322712 LINC00158P58513 81 aa13.65□□□□□ -0.22
PDZD3-201ENST00000322712 UBE2WQ96B02 151 aa13.64□□□□□ -0.23
PDZD3-201ENST00000322712 WFDC10BQ8IUB3 73 aa13.63□□□□□ -0.23
PDZD3-201ENST00000322712 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
PDZD3-201ENST00000322712 CLEC2BQ92478 149 aa13.63□□□□□ -0.23
PDZD3-201ENST00000322712 COX7A2LO14548 114 aa13.63□□□□□ -0.23
PDZD3-201ENST00000322712 H3BT86 120 aa13.62□□□□□ -0.23
PDZD3-201ENST00000322712 ENHOQ6UWT2 76 aa13.62□□□□□ -0.23
PDZD3-201ENST00000322712 DEFB131BA0A096LNP1 70 aa13.61□□□□□ -0.23
PDZD3-201ENST00000322712 TRAV8-4A0A0B4J246 113 aa13.61□□□□□ -0.23
PDZD3-201ENST00000322712 LST1O00453 97 aa13.61□□□□□ -0.23
PDZD3-201ENST00000322712 DNHD1Q96M86 4753 aa13.61□□□□□ -0.23
PDZD3-201ENST00000322712 MALP21145 153 aa13.6□□□□□ -0.23
PDZD3-201ENST00000322712 Q8IZM0 81 aa13.6□□□□□ -0.23
PDZD3-201ENST00000322712 KIAA0087Q14695 138 aa13.6□□□□□ -0.23
PDZD3-201ENST00000322712 IBA57-AS1B1ANH7 110 aa13.59□□□□□ -0.23
PDZD3-201ENST00000322712 H3BNG1 76 aa13.59□□□□□ -0.23
PDZD3-201ENST00000322712 ESRGQ1W209 222 aa13.59□□□□□ -0.23
PDZD3-201ENST00000322712 PRR34Q9NV39 138 aa13.59□□□□□ -0.23
PDZD3-201ENST00000322712 SNCGO76070 127 aa13.59□□□□□ -0.23
PDZD3-201ENST00000322712 LINC00526Q96FQ7 95 aa13.58□□□□□ -0.24
PDZD3-201ENST00000322712 CCL18P55774 89 aa13.58□□□□□ -0.24
PDZD3-201ENST00000322712 COPS9Q8WXC6 57 aa13.58□□□□□ -0.24
PDZD3-201ENST00000322712 SND1-IT1Q9HBX3 110 aa13.56□□□□□ -0.24
PDZD3-201ENST00000322712 IGKV2-28A0A075B6P5 120 aa13.56□□□□□ -0.24
PDZD3-201ENST00000322712 IGKV2D-28P01615 120 aa13.56□□□□□ -0.24
PDZD3-201ENST00000322712 C9orf116Q5BN46 136 aaPredicted RBP13.56□□□□□ -0.24
PDZD3-201ENST00000322712 LINC01561Q8N1V8 128 aa13.56□□□□□ -0.24
PDZD3-201ENST00000322712 C6orf223Q8N319 242 aa13.55□□□□□ -0.24
PDZD3-201ENST00000322712 ANAPC13Q9BS18 74 aa13.55□□□□□ -0.24
PDZD3-201ENST00000322712 HUWE1Q7Z6Z7 4374 aaKnown RBP13.55□□□□□ -0.24
PDZD3-201ENST00000322712 GAGE2BQ13066 116 aa13.54□□□□□ -0.24
PDZD3-201ENST00000322712 GAGE2EQ4V326 116 aa13.54□□□□□ -0.24
PDZD3-201ENST00000322712 LINC00337Q8N6G1 96 aa13.54□□□□□ -0.24
PDZD3-201ENST00000322712 TM2D3Q9BRN9 247 aa13.54□□□□□ -0.24
PDZD3-201ENST00000322712 GAGE2DQ9UEU5 116 aa13.54□□□□□ -0.24
PDZD3-201ENST00000322712 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
PDZD3-201ENST00000322712 CRPP02741 224 aa13.51□□□□□ -0.25
PDZD3-201ENST00000322712 C10orf25Q5T742 122 aa13.51□□□□□ -0.25
PDZD3-201ENST00000322712 C15orf53Q8NAA6 179 aa13.51□□□□□ -0.25
PDZD3-201ENST00000322712 COL7A1Q02388 2944 aa13.5□□□□□ -0.25
PDZD3-201ENST00000322712 PPDPFQ9H3Y8 114 aa13.5□□□□□ -0.25
PDZD3-201ENST00000322712 UNQ6190/PRO20217Q6UXQ8 127 aa13.49□□□□□ -0.25
PDZD3-201ENST00000322712 SPAG11BQ08648 103 aa13.49□□□□□ -0.25
PDZD3-201ENST00000322712 FAM240AA0A1B0GVK7 77 aa13.48□□□□□ -0.25
PDZD3-201ENST00000322712 Q6Q795 121 aa13.48□□□□□ -0.25
PDZD3-201ENST00000322712 KLK5Q9Y337 293 aaPredicted RBP13.48□□□□□ -0.25
PDZD3-201ENST00000322712 PRR3P79522 188 aaKnown RBP13.47□□□□□ -0.25
PDZD3-201ENST00000322712 CXCL5P42830 114 aa13.45□□□□□ -0.26
PDZD3-201ENST00000322712 NDUFV3P56181 108 aaKnown RBP13.45□□□□□ -0.26
PDZD3-201ENST00000322712 TRAV13-2A0A0B4J235 113 aa13.45□□□□□ -0.26
PDZD3-201ENST00000322712 TTC32Q5I0X7 151 aa13.45□□□□□ -0.26
PDZD3-201ENST00000322712 STAB2Q8WWQ8 2551 aa13.44□□□□□ -0.26
PDZD3-201ENST00000322712 KRTAP26-1Q6PEX3 210 aa13.44□□□□□ -0.26
PDZD3-201ENST00000322712 NHLRC4P0CG21 123 aaPredicted RBP13.43□□□□□ -0.26
PDZD3-201ENST00000322712 TRAV10A0A0B4J240 114 aa13.43□□□□□ -0.26
PDZD3-201ENST00000322712 Q8NDZ9 215 aa13.42□□□□□ -0.26
PDZD3-201ENST00000322712 SMIM11BQ8TCY0 68 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms