RNA–Protein interactions for RNA: ENST00000322269.10

FAM3A-201, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-201ENST00000322269 RPL13AP40429 203 aaKnown RBP12.92□□□□□ -0.34
FAM3A-201ENST00000322269 SIGMAR1Q99720 223 aa12.92□□□□□ -0.34
FAM3A-201ENST00000322269 PAX4O43316 350 aa12.92□□□□□ -0.34
FAM3A-201ENST00000322269 TENM3Q9P273 2699 aa12.92□□□□□ -0.34
FAM3A-201ENST00000322269 MEIG1Q5JSS6 88 aa12.91□□□□□ -0.34
FAM3A-201ENST00000322269 SOSTDC1Q6X4U4 206 aa12.9□□□□□ -0.34
FAM3A-201ENST00000322269 C11orf45Q8TAV5 145 aa12.89□□□□□ -0.35
FAM3A-201ENST00000322269 COX7B2Q8TF08 81 aa12.89□□□□□ -0.35
FAM3A-201ENST00000322269 MEGF8Q7Z7M0 2845 aa12.89□□□□□ -0.35
FAM3A-201ENST00000322269 HUWE1Q7Z6Z7 4374 aaKnown RBP12.89□□□□□ -0.35
FAM3A-201ENST00000322269 IGHV3OR16-9A0A0B4J2B5 98 aa12.88□□□□□ -0.35
FAM3A-201ENST00000322269 TRBV10-2A0A0K0K1G8 114 aa12.88□□□□□ -0.35
FAM3A-201ENST00000322269 A0A0U1RRA0 63 aa12.88□□□□□ -0.35
FAM3A-201ENST00000322269 HTN3P15516 51 aa12.88□□□□□ -0.35
FAM3A-201ENST00000322269 IGKV3OR2-268A0A0C4DH90 116 aa12.86□□□□□ -0.35
FAM3A-201ENST00000322269 SCGB1A1P11684 91 aa12.86□□□□□ -0.35
FAM3A-201ENST00000322269 Q6ZTC4 211 aa12.86□□□□□ -0.35
FAM3A-201ENST00000322269 TRAV26-1A0A087WT03 109 aa12.85□□□□□ -0.35
FAM3A-201ENST00000322269 A0A087WZ39 114 aa12.85□□□□□ -0.35
FAM3A-201ENST00000322269 LST1O00453 97 aa12.85□□□□□ -0.35
FAM3A-201ENST00000322269 NHLRC4P0CG21 123 aaPredicted RBP12.85□□□□□ -0.35
FAM3A-201ENST00000322269 NANOS2P60321 138 aaKnown RBP12.85□□□□□ -0.35
FAM3A-201ENST00000322269 CDIP1Q9H305 208 aa12.85□□□□□ -0.35
FAM3A-201ENST00000322269 A0A1B0GUV1 79 aa12.85□□□□□ -0.35
FAM3A-201ENST00000322269 DNAH9Q9NYC9 4486 aa12.84□□□□□ -0.35
FAM3A-201ENST00000322269 LINC00959A0A1B0GUT2 108 aa12.84□□□□□ -0.35
FAM3A-201ENST00000322269 CLEC2BQ92478 149 aa12.84□□□□□ -0.35
FAM3A-201ENST00000322269 H3BT86 120 aa12.83□□□□□ -0.36
FAM3A-201ENST00000322269 TOMM7Q9P0U1 55 aa12.82□□□□□ -0.36
FAM3A-201ENST00000322269 COL7A1Q02388 2944 aa12.82□□□□□ -0.36
FAM3A-201ENST00000322269 NTN5Q8WTR8 489 aaPredicted RBP12.81□□□□□ -0.36
FAM3A-201ENST00000322269 FBN3Q75N90 2809 aa12.81□□□□□ -0.36
FAM3A-201ENST00000322269 MRPL23Q16540 153 aaKnown RBP12.81□□□□□ -0.36
FAM3A-201ENST00000322269 A0A096LPF7 62 aa12.8□□□□□ -0.36
FAM3A-201ENST00000322269 C2orf82Q6UX34 121 aa12.8□□□□□ -0.36
FAM3A-201ENST00000322269 DEFB131BA0A096LNP1 70 aa12.79□□□□□ -0.36
FAM3A-201ENST00000322269 TMEM262E9PQX1 116 aa12.79□□□□□ -0.36
FAM3A-201ENST00000322269 COX7A2LO14548 114 aa12.79□□□□□ -0.36
FAM3A-201ENST00000322269 C5orf38Q86SI9 138 aa12.79□□□□□ -0.36
FAM3A-201ENST00000322269 SS18Q15532 418 aa12.78□□□□□ -0.36
FAM3A-201ENST00000322269 MIR7-3HGQ8N6C7 128 aa12.78□□□□□ -0.36
FAM3A-201ENST00000322269 IBA57-AS1B1ANH7 110 aa12.78□□□□□ -0.36
FAM3A-201ENST00000322269 LINC01561Q8N1V8 128 aa12.77□□□□□ -0.37
FAM3A-201ENST00000322269 UBE2WQ96B02 151 aa12.77□□□□□ -0.37
FAM3A-201ENST00000322269 H3BNG1 76 aa12.76□□□□□ -0.37
FAM3A-201ENST00000322269 TRAV13-2A0A0B4J235 113 aa12.76□□□□□ -0.37
FAM3A-201ENST00000322269 TRAV10A0A0B4J240 114 aa12.76□□□□□ -0.37
FAM3A-201ENST00000322269 PRKDCP78527 4128 aaKnown RBP12.76□□□□□ -0.37
FAM3A-201ENST00000322269 TEX49A0A1B0GTD5 131 aa12.75□□□□□ -0.37
FAM3A-201ENST00000322269 LINC00158P58513 81 aa12.75□□□□□ -0.37
FAM3A-201ENST00000322269 XCL1P47992 114 aa12.74□□□□□ -0.37
FAM3A-201ENST00000322269 SND1-IT1Q9HBX3 110 aa12.74□□□□□ -0.37
FAM3A-201ENST00000322269 LELP1Q5T871 98 aa12.74□□□□□ -0.37
FAM3A-201ENST00000322269 CRPP02741 224 aa12.73□□□□□ -0.37
FAM3A-201ENST00000322269 XGP55808 180 aa12.73□□□□□ -0.37
FAM3A-201ENST00000322269 Q8IZM0 81 aa12.73□□□□□ -0.37
FAM3A-201ENST00000322269 IGKV2-28A0A075B6P5 120 aa12.72□□□□□ -0.37
FAM3A-201ENST00000322269 IGKV2D-28P01615 120 aa12.72□□□□□ -0.37
FAM3A-201ENST00000322269 CCL18P55774 89 aa12.72□□□□□ -0.37
FAM3A-201ENST00000322269 C6orf226Q5I0X4 101 aa12.72□□□□□ -0.37
FAM3A-201ENST00000322269 TRACP01848 142 aa12.71□□□□□ -0.38
FAM3A-201ENST00000322269 MT-ATP8P03928 68 aa12.71□□□□□ -0.38
FAM3A-201ENST00000322269 RPL28P46779 137 aaKnown RBP12.71□□□□□ -0.38
FAM3A-201ENST00000322269 CLPSL2Q6UWE3 100 aa12.71□□□□□ -0.38
FAM3A-201ENST00000322269 LINC00337Q8N6G1 96 aa12.71□□□□□ -0.38
FAM3A-201ENST00000322269 PFN2P35080 140 aa12.69□□□□□ -0.38
FAM3A-201ENST00000322269 CD164L2Q6UWJ8 174 aa12.69□□□□□ -0.38
FAM3A-201ENST00000322269 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
FAM3A-201ENST00000322269 TRAV8-4A0A0B4J246 113 aa12.68□□□□□ -0.38
FAM3A-201ENST00000322269 LYPD5Q6UWN5 251 aa12.67□□□□□ -0.38
FAM3A-201ENST00000322269 STAB2Q8WWQ8 2551 aa12.67□□□□□ -0.38
FAM3A-201ENST00000322269 ANGP03950 147 aaKnown RBP12.66□□□□□ -0.38
FAM3A-201ENST00000322269 CHCHD10Q8WYQ3 142 aaPredicted RBP12.66□□□□□ -0.38
FAM3A-201ENST00000322269 REG3AQ06141 175 aa12.65□□□□□ -0.38
FAM3A-201ENST00000322269 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
FAM3A-201ENST00000322269 FAM218AQ96MZ4 157 aa12.65□□□□□ -0.38
FAM3A-201ENST00000322269 KIAA0087Q14695 138 aa12.64□□□□□ -0.39
FAM3A-201ENST00000322269 Q8N3U1 123 aa12.64□□□□□ -0.39
FAM3A-201ENST00000322269 FAM240AA0A1B0GVK7 77 aa12.63□□□□□ -0.39
FAM3A-201ENST00000322269 CXCL5P42830 114 aa12.63□□□□□ -0.39
FAM3A-201ENST00000322269 SMIM11BQ8TCY0 68 aa12.63□□□□□ -0.39
FAM3A-201ENST00000322269 CKS1BP61024 79 aa12.62□□□□□ -0.39
FAM3A-201ENST00000322269 PRR34Q9NV39 138 aa12.61□□□□□ -0.39
FAM3A-201ENST00000322269 COX17Q14061 63 aa12.6□□□□□ -0.39
FAM3A-201ENST00000322269 ESRGQ1W209 222 aa12.6□□□□□ -0.39
FAM3A-201ENST00000322269 CFAP161Q6P656 301 aa12.6□□□□□ -0.39
FAM3A-201ENST00000322269 IGLV10-54A0A075B6I4 117 aa12.6□□□□□ -0.39
FAM3A-201ENST00000322269 BAALC-AS2P0C853 105 aa12.6□□□□□ -0.39
FAM3A-201ENST00000322269 H0YGX0 51 aa12.59□□□□□ -0.39
FAM3A-201ENST00000322269 MALP21145 153 aa12.59□□□□□ -0.39
FAM3A-201ENST00000322269 C22orf24Q9Y442 160 aa12.58□□□□□ -0.4
FAM3A-201ENST00000322269 NUPR2A6NF83 97 aa12.56□□□□□ -0.4
FAM3A-201ENST00000322269 SNCGO76070 127 aa12.56□□□□□ -0.4
FAM3A-201ENST00000322269 A0A1B0GV72 72 aa12.55□□□□□ -0.4
FAM3A-201ENST00000322269 OR13C6PQ8NH95 151 aa12.55□□□□□ -0.4
FAM3A-201ENST00000322269 KLK12Q9UKR0 248 aa12.55□□□□□ -0.4
FAM3A-201ENST00000322269 KLK5Q9Y337 293 aaPredicted RBP12.55□□□□□ -0.4
FAM3A-201ENST00000322269 TGP01266 2768 aa12.55□□□□□ -0.4
FAM3A-201ENST00000322269 NDUFC2O95298 119 aa12.55□□□□□ -0.4
FAM3A-201ENST00000322269 ENHOQ6UWT2 76 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms