RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 A0A087WVE0 104 aa12.77□□□□□ -0.37
ATP2A3-201ENST00000309890 C9orf116Q5BN46 136 aaPredicted RBP12.77□□□□□ -0.37
ATP2A3-201ENST00000309890 FLNBO75369 2602 aaKnown RBP12.77□□□□□ -0.37
ATP2A3-201ENST00000309890 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
ATP2A3-201ENST00000309890 A0A1B0GUV1 79 aa12.76□□□□□ -0.37
ATP2A3-201ENST00000309890 PCSK5Q92824 1860 aa12.76□□□□□ -0.37
ATP2A3-201ENST00000309890 LY6G6DO95868 133 aa12.76□□□□□ -0.37
ATP2A3-201ENST00000309890 EGFEM1PQ0D2K5 195 aa12.75□□□□□ -0.37
ATP2A3-201ENST00000309890 PRR3P79522 188 aaKnown RBP12.75□□□□□ -0.37
ATP2A3-201ENST00000309890 MPLKIPQ8TAP9 179 aa12.75□□□□□ -0.37
ATP2A3-201ENST00000309890 CHKB-CPT1BH3BT56 60 aa12.75□□□□□ -0.37
ATP2A3-201ENST00000309890 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
ATP2A3-201ENST00000309890 TRAV7A0A075B6U4 112 aa12.74□□□□□ -0.37
ATP2A3-201ENST00000309890 TRAV10A0A0B4J240 114 aa12.73□□□□□ -0.37
ATP2A3-201ENST00000309890 TRBV10-3A0A0K0K1G6 114 aa12.73□□□□□ -0.37
ATP2A3-201ENST00000309890 TRBV7-7A0A0K0K1E9 115 aa12.73□□□□□ -0.37
ATP2A3-201ENST00000309890 A0A096LNI7 61 aa12.72□□□□□ -0.37
ATP2A3-201ENST00000309890 KLK9Q2XQG4 91 aa12.72□□□□□ -0.37
ATP2A3-201ENST00000309890 LINC01561Q8N1V8 128 aa12.71□□□□□ -0.38
ATP2A3-201ENST00000309890 SHISA2Q6UWI4 295 aa12.71□□□□□ -0.38
ATP2A3-201ENST00000309890 IGHV4-30-4P0DP06 118 aa12.7□□□□□ -0.38
ATP2A3-201ENST00000309890 MUC4Q99102 2169 aa12.7□□□□□ -0.38
ATP2A3-201ENST00000309890 PCNTO95613 3336 aa12.7□□□□□ -0.38
ATP2A3-201ENST00000309890 IGLV5-45A0A087WSX0 123 aa12.69□□□□□ -0.38
ATP2A3-201ENST00000309890 SBSPONQ8IVN8 264 aa12.69□□□□□ -0.38
ATP2A3-201ENST00000309890 LINC00846Q9NV44 126 aa12.69□□□□□ -0.38
ATP2A3-201ENST00000309890 C16orf95Q9H693 158 aa12.68□□□□□ -0.38
ATP2A3-201ENST00000309890 IGHV3OR16-9A0A0B4J2B5 98 aa12.67□□□□□ -0.38
ATP2A3-201ENST00000309890 WFDC10BQ8IUB3 73 aa12.67□□□□□ -0.38
ATP2A3-201ENST00000309890 UTRNP46939 3433 aa12.66□□□□□ -0.38
ATP2A3-201ENST00000309890 IGKV4-1P06312 121 aa12.66□□□□□ -0.38
ATP2A3-201ENST00000309890 COL27A1Q8IZC6 1860 aaPredicted RBP12.66□□□□□ -0.38
ATP2A3-201ENST00000309890 RPL37AP8A6NKH3 93 aa12.65□□□□□ -0.38
ATP2A3-201ENST00000309890 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.38
ATP2A3-201ENST00000309890 Q8N2B8 174 aa12.65□□□□□ -0.38
ATP2A3-201ENST00000309890 ANKRD17O75179 2603 aaKnown RBP12.65□□□□□ -0.38
ATP2A3-201ENST00000309890 SMIM26A0A096LP01 95 aa12.64□□□□□ -0.39
ATP2A3-201ENST00000309890 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.64□□□□□ -0.39
ATP2A3-201ENST00000309890 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.63□□□□□ -0.39
ATP2A3-201ENST00000309890 LINC00575Q6W349 94 aa12.63□□□□□ -0.39
ATP2A3-201ENST00000309890 WFDC13Q8IUB5 93 aa12.63□□□□□ -0.39
ATP2A3-201ENST00000309890 Q8N3U1 123 aa12.62□□□□□ -0.39
ATP2A3-201ENST00000309890 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
ATP2A3-201ENST00000309890 SERP1Q9Y6X1 66 aa12.61□□□□□ -0.39
ATP2A3-201ENST00000309890 V9GYY9 64 aa12.61□□□□□ -0.39
ATP2A3-201ENST00000309890 Q9UF83 564 aa12.6□□□□□ -0.39
ATP2A3-201ENST00000309890 C4orf48Q5BLP8 95 aa12.6□□□□□ -0.39
ATP2A3-201ENST00000309890 C6orf223Q8N319 242 aa12.6□□□□□ -0.39
ATP2A3-201ENST00000309890 PLA2G2AP14555 144 aa12.59□□□□□ -0.39
ATP2A3-201ENST00000309890 NANOS2P60321 138 aaKnown RBP12.59□□□□□ -0.39
ATP2A3-201ENST00000309890 OXLD1Q5BKU9 147 aa12.59□□□□□ -0.39
ATP2A3-201ENST00000309890 SOSTDC1Q6X4U4 206 aa12.59□□□□□ -0.39
ATP2A3-201ENST00000309890 C1orf137Q5JT78 98 aa12.59□□□□□ -0.39
ATP2A3-201ENST00000309890 Q6ZVQ6 151 aa12.58□□□□□ -0.4
ATP2A3-201ENST00000309890 PPDPFQ9H3Y8 114 aa12.58□□□□□ -0.4
ATP2A3-201ENST00000309890 A0A0J9YWU9 116 aa12.57□□□□□ -0.4
ATP2A3-201ENST00000309890 CELA1Q9UNI1 258 aa12.57□□□□□ -0.4
ATP2A3-201ENST00000309890 SMR3AQ99954 134 aa12.56□□□□□ -0.4
ATP2A3-201ENST00000309890 C2orf48Q96LS8 159 aa12.56□□□□□ -0.4
ATP2A3-201ENST00000309890 A0A0U1RQV1 116 aa12.55□□□□□ -0.4
ATP2A3-201ENST00000309890 FAM30AQ9NZY2 134 aa12.55□□□□□ -0.4
ATP2A3-201ENST00000309890 CHD7Q9P2D1 2997 aa12.55□□□□□ -0.4
ATP2A3-201ENST00000309890 HRCT1Q6UXD1 115 aa12.55□□□□□ -0.4
ATP2A3-201ENST00000309890 F8WDY8 70 aa12.54□□□□□ -0.4
ATP2A3-201ENST00000309890 SPTSSBQ8NFR3 76 aa12.54□□□□□ -0.4
ATP2A3-201ENST00000309890 A8MTW9 85 aa12.54□□□□□ -0.4
ATP2A3-201ENST00000309890 PRR4Q16378 134 aa12.54□□□□□ -0.4
ATP2A3-201ENST00000309890 F8P00451 2351 aa12.53□□□□□ -0.4
ATP2A3-201ENST00000309890 Q6ZTC4 211 aa12.53□□□□□ -0.4
ATP2A3-201ENST00000309890 FAM218AQ96MZ4 157 aa12.53□□□□□ -0.4
ATP2A3-201ENST00000309890 LINC01547P58512 204 aaPredicted RBP12.53□□□□□ -0.4
ATP2A3-201ENST00000309890 LYPD5Q6UWN5 251 aa12.52□□□□□ -0.4
ATP2A3-201ENST00000309890 MRPL55Q7Z7F7 128 aaKnown RBP12.52□□□□□ -0.4
ATP2A3-201ENST00000309890 FHL3Q13643 280 aa12.51□□□□□ -0.41
ATP2A3-201ENST00000309890 LITAFQ99732 161 aa12.51□□□□□ -0.41
ATP2A3-201ENST00000309890 RETNQ9HD89 108 aa12.51□□□□□ -0.41
ATP2A3-201ENST00000309890 PRYO14603 147 aa12.49□□□□□ -0.41
ATP2A3-201ENST00000309890 BPTFQ12830 3046 aa12.49□□□□□ -0.41
ATP2A3-201ENST00000309890 CRYGAP11844 174 aa12.49□□□□□ -0.41
ATP2A3-201ENST00000309890 CXCL6P80162 114 aa12.48□□□□□ -0.41
ATP2A3-201ENST00000309890 ZNF706Q9Y5V0 76 aaPredicted RBP12.48□□□□□ -0.41
ATP2A3-201ENST00000309890 Q6ZRU5 148 aa12.47□□□□□ -0.41
ATP2A3-201ENST00000309890 USP24Q9UPU5 2620 aa12.47□□□□□ -0.41
ATP2A3-201ENST00000309890 TMEM254Q8TBM7 123 aa12.46□□□□□ -0.41
ATP2A3-201ENST00000309890 PLAC8L1A1L4L8 177 aa12.46□□□□□ -0.41
ATP2A3-201ENST00000309890 REG3GQ6UW15 175 aa12.46□□□□□ -0.41
ATP2A3-201ENST00000309890 LINC00474Q9P2X8 69 aa12.45□□□□□ -0.42
ATP2A3-201ENST00000309890 LINC00208Q96KT6 92 aa12.43□□□□□ -0.42
ATP2A3-201ENST00000309890 C10orf25Q5T742 122 aa12.43□□□□□ -0.42
ATP2A3-201ENST00000309890 SEC61GP60059 68 aa12.42□□□□□ -0.42
ATP2A3-201ENST00000309890 Q8N9L7 120 aa12.42□□□□□ -0.42
ATP2A3-201ENST00000309890 BCE1O60756 84 aa12.41□□□□□ -0.42
ATP2A3-201ENST00000309890 SVIPQ8NHG7 77 aa12.41□□□□□ -0.42
ATP2A3-201ENST00000309890 SPINK6Q6UWN8 80 aa12.41□□□□□ -0.42
ATP2A3-201ENST00000309890 SPATA3Q8NHX4 192 aa12.4□□□□□ -0.42
ATP2A3-201ENST00000309890 CASC2Q6XLA1 102 aa12.4□□□□□ -0.42
ATP2A3-201ENST00000309890 C5orf42Q9H799 3197 aa12.4□□□□□ -0.43
ATP2A3-201ENST00000309890 IGLV9-49A0A0B4J1Y8 123 aa12.39□□□□□ -0.43
ATP2A3-201ENST00000309890 A6NED7 52 aa12.38□□□□□ -0.43
ATP2A3-201ENST00000309890 FSHBP01225 129 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms