RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SEC11AP67812 179 aa10.5□□□□□ -0.73
HMGCLL1-202ENST00000308161 SRSF9Q13242 221 aaKnown RBP eCLIP10.5□□□□□ -0.73
HMGCLL1-202ENST00000308161 COX19Q49B96 90 aa10.5□□□□□ -0.73
HMGCLL1-202ENST00000308161 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
HMGCLL1-202ENST00000308161 LINC01600Q96MT4 127 aa10.5□□□□□ -0.73
HMGCLL1-202ENST00000308161 SMCO4Q9NRQ5 59 aa10.5□□□□□ -0.73
HMGCLL1-202ENST00000308161 CARHSP1Q9Y2V2 147 aaKnown RBP10.5□□□□□ -0.73
HMGCLL1-202ENST00000308161 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
HMGCLL1-202ENST00000308161 C10orf91Q5T1B1 145 aa10.49□□□□□ -0.73
HMGCLL1-202ENST00000308161 FAM19A3Q7Z5A8 133 aa10.49□□□□□ -0.73
HMGCLL1-202ENST00000308161 LINC00469Q8N7U9 141 aa10.49□□□□□ -0.73
HMGCLL1-202ENST00000308161 Q8IZM0 81 aa10.48□□□□□ -0.73
HMGCLL1-202ENST00000308161 M0QXV9 152 aa10.47□□□□□ -0.73
HMGCLL1-202ENST00000308161 ODF1Q14990 250 aa10.47□□□□□ -0.73
HMGCLL1-202ENST00000308161 UBE2BP63146 152 aa10.46□□□□□ -0.73
HMGCLL1-202ENST00000308161 C9orf129Q5T035 196 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-202ENST00000308161 APOC3P02656 99 aa10.45□□□□□ -0.74
HMGCLL1-202ENST00000308161 KRTAP11-1Q8IUC1 163 aa10.45□□□□□ -0.74
HMGCLL1-202ENST00000308161 KRTAP7-1Q8IUC3 87 aa10.45□□□□□ -0.74
HMGCLL1-202ENST00000308161 LINC01546A6NGU7 62 aa10.44□□□□□ -0.74
HMGCLL1-202ENST00000308161 XAGE1AQ9HD64 81 aa10.44□□□□□ -0.74
HMGCLL1-202ENST00000308161 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
HMGCLL1-202ENST00000308161 TINCRA0A1B0GVN0 87 aa10.43□□□□□ -0.74
HMGCLL1-202ENST00000308161 LINC01549A6NIU2 74 aa10.43□□□□□ -0.74
HMGCLL1-202ENST00000308161 SMIM1B2RUZ4 78 aa10.43□□□□□ -0.74
HMGCLL1-202ENST00000308161 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
HMGCLL1-202ENST00000308161 F8VRH5 84 aa10.42□□□□□ -0.74
HMGCLL1-202ENST00000308161 IGLV7-43P04211 117 aa10.42□□□□□ -0.74
HMGCLL1-202ENST00000308161 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
HMGCLL1-202ENST00000308161 PMVKQ15126 192 aa10.42□□□□□ -0.74
HMGCLL1-202ENST00000308161 NDUFA6P56556 154 aa10.41□□□□□ -0.74
HMGCLL1-202ENST00000308161 NDUFA5Q16718 116 aa10.41□□□□□ -0.74
HMGCLL1-202ENST00000308161 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
HMGCLL1-202ENST00000308161 CXCL5P42830 114 aa10.4□□□□□ -0.74
HMGCLL1-202ENST00000308161 PDZD11Q5EBL8 140 aa10.4□□□□□ -0.74
HMGCLL1-202ENST00000308161 SNAPINO95295 136 aa10.39□□□□□ -0.75
HMGCLL1-202ENST00000308161 KRTAP10-8P60410 259 aa10.39□□□□□ -0.75
HMGCLL1-202ENST00000308161 C18orf32Q8TCD1 76 aa10.39□□□□□ -0.75
HMGCLL1-202ENST00000308161 IGLV5-45A0A087WSX0 123 aa10.38□□□□□ -0.75
HMGCLL1-202ENST00000308161 PMCHL1Q16048 86 aa10.38□□□□□ -0.75
HMGCLL1-202ENST00000308161 SVBPQ8N300 66 aa10.38□□□□□ -0.75
HMGCLL1-202ENST00000308161 DIRC1Q969H9 104 aa10.38□□□□□ -0.75
HMGCLL1-202ENST00000308161 UBR4Q5T4S7 5183 aa10.37□□□□□ -0.75
HMGCLL1-202ENST00000308161 LINC00614P0C842 121 aa10.37□□□□□ -0.75
HMGCLL1-202ENST00000308161 RAB5BP61020 215 aa10.37□□□□□ -0.75
HMGCLL1-202ENST00000308161 URB1-AS1Q96HZ7 61 aa10.37□□□□□ -0.75
HMGCLL1-202ENST00000308161 A0A096LNJ9 63 aa10.36□□□□□ -0.75
HMGCLL1-202ENST00000308161 H3BRM9 83 aa10.36□□□□□ -0.75
HMGCLL1-202ENST00000308161 HBDP02042 147 aa10.36□□□□□ -0.75
HMGCLL1-202ENST00000308161 C22orf24Q9Y442 160 aa10.36□□□□□ -0.75
HMGCLL1-202ENST00000308161 H0Y9J4 135 aa10.34□□□□□ -0.75
HMGCLL1-202ENST00000308161 IGLC3P0DOY3 106 aa10.33□□□□□ -0.76
HMGCLL1-202ENST00000308161 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
HMGCLL1-202ENST00000308161 PRR26Q8N8Z3 221 aa10.33□□□□□ -0.76
HMGCLL1-202ENST00000308161 ATP5LO75964 103 aa10.32□□□□□ -0.76
HMGCLL1-202ENST00000308161 ZNF22P17026 224 aaPredicted RBP10.31□□□□□ -0.76
HMGCLL1-202ENST00000308161 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
HMGCLL1-202ENST00000308161 BAGE3Q86Y29 109 aa10.31□□□□□ -0.76
HMGCLL1-202ENST00000308161 GAGE10A6NGK3 116 aa10.3□□□□□ -0.76
HMGCLL1-202ENST00000308161 PFN2P35080 140 aa10.3□□□□□ -0.76
HMGCLL1-202ENST00000308161 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
HMGCLL1-202ENST00000308161 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
HMGCLL1-202ENST00000308161 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
HMGCLL1-202ENST00000308161 NUPR1O60356 82 aa10.28□□□□□ -0.76
HMGCLL1-202ENST00000308161 TP73-AS1Q9UF72 201 aa10.28□□□□□ -0.76
HMGCLL1-202ENST00000308161 IGLV5-39A0A0G2JS06 123 aa10.27□□□□□ -0.77
HMGCLL1-202ENST00000308161 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
HMGCLL1-202ENST00000308161 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.77
HMGCLL1-202ENST00000308161 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.77
HMGCLL1-202ENST00000308161 LINC00167Q96N53 147 aa10.27□□□□□ -0.77
HMGCLL1-202ENST00000308161 YPEL4Q96NS1 127 aa10.27□□□□□ -0.77
HMGCLL1-202ENST00000308161 LRP2P98164 4655 aa10.26□□□□□ -0.77
HMGCLL1-202ENST00000308161 ZNF861PO60384 105 aa10.26□□□□□ -0.77
HMGCLL1-202ENST00000308161 CHTOPQ9Y3Y2 248 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-202ENST00000308161 KRTAP1-4P0C5Y4 121 aa10.25□□□□□ -0.77
HMGCLL1-202ENST00000308161 CHCHD1Q96BP2 118 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-202ENST00000308161 ERG28Q9UKR5 140 aa10.24□□□□□ -0.77
HMGCLL1-202ENST00000308161 IGLV1-50A0A075B6I6 118 aa10.23□□□□□ -0.77
HMGCLL1-202ENST00000308161 BCE1O60756 84 aa10.23□□□□□ -0.77
HMGCLL1-202ENST00000308161 SCO1O75880 301 aa10.23□□□□□ -0.77
HMGCLL1-202ENST00000308161 RPL28P46779 137 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-202ENST00000308161 IFI27L1Q96BM0 104 aa10.22□□□□□ -0.77
HMGCLL1-202ENST00000308161 IGKV2-28A0A075B6P5 120 aa10.21□□□□□ -0.78
HMGCLL1-202ENST00000308161 HSBP1O75506 76 aa10.21□□□□□ -0.78
HMGCLL1-202ENST00000308161 IGKV2D-28P01615 120 aa10.21□□□□□ -0.78
HMGCLL1-202ENST00000308161 SND1-IT1Q9HBX3 110 aa10.21□□□□□ -0.78
HMGCLL1-202ENST00000308161 IGLV5-37A0A075B6J1 123 aa10.2□□□□□ -0.78
HMGCLL1-202ENST00000308161 FAM19A2Q8N3H0 131 aa10.2□□□□□ -0.78
HMGCLL1-202ENST00000308161 H0Y8G0 127 aa10.19□□□□□ -0.78
HMGCLL1-202ENST00000308161 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
HMGCLL1-202ENST00000308161 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
HMGCLL1-202ENST00000308161 TRGC2P03986 189 aa10.18□□□□□ -0.78
HMGCLL1-202ENST00000308161 RPL13AP40429 203 aaKnown RBP10.18□□□□□ -0.78
HMGCLL1-202ENST00000308161 UBE2AP49459 152 aa10.18□□□□□ -0.78
HMGCLL1-202ENST00000308161 TMEM223A0PJW6 202 aa10.17□□□□□ -0.78
HMGCLL1-202ENST00000308161 LINC00158P58513 81 aa10.17□□□□□ -0.78
HMGCLL1-202ENST00000308161 COX17Q14061 63 aa10.17□□□□□ -0.78
HMGCLL1-202ENST00000308161 SFTA2Q6UW10 78 aa10.17□□□□□ -0.78
HMGCLL1-202ENST00000308161 SLC7A5P1Q8MH63 180 aa10.17□□□□□ -0.78
HMGCLL1-202ENST00000308161 VPREB1P12018 145 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms