RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 WFDC2Q14508 124 aa13.23□□□□□ -0.29
HOXC4-201ENST00000303406 Q8N3U1 123 aa13.23□□□□□ -0.29
HOXC4-201ENST00000303406 MIR7-3HGQ8N6C7 128 aa13.23□□□□□ -0.29
HOXC4-201ENST00000303406 C11orf45Q8TAV5 145 aa13.23□□□□□ -0.29
HOXC4-201ENST00000303406 M0QXV9 152 aa13.23□□□□□ -0.29
HOXC4-201ENST00000303406 TRIAP1O43715 76 aa13.23□□□□□ -0.29
HOXC4-201ENST00000303406 COX6CP09669 75 aa13.23□□□□□ -0.29
HOXC4-201ENST00000303406 KIAA0087Q14695 138 aa13.22□□□□□ -0.29
HOXC4-201ENST00000303406 ATXN8Q156A1 80 aa13.22□□□□□ -0.29
HOXC4-201ENST00000303406 TM2D3Q9BRN9 247 aa13.22□□□□□ -0.29
HOXC4-201ENST00000303406 TRAV8-4A0A0B4J246 113 aa13.21□□□□□ -0.29
HOXC4-201ENST00000303406 LINC00158P58513 81 aa13.21□□□□□ -0.29
HOXC4-201ENST00000303406 KLK5Q9Y337 293 aaPredicted RBP13.2□□□□□ -0.3
HOXC4-201ENST00000303406 DEFB131BA0A096LNP1 70 aa13.19□□□□□ -0.3
HOXC4-201ENST00000303406 MALP21145 153 aa13.19□□□□□ -0.3
HOXC4-201ENST00000303406 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
HOXC4-201ENST00000303406 CFAP161Q6P656 301 aa13.19□□□□□ -0.3
HOXC4-201ENST00000303406 LINC01600Q96MT4 127 aa13.19□□□□□ -0.3
HOXC4-201ENST00000303406 STAB1Q9NY15 2570 aa13.19□□□□□ -0.3
HOXC4-201ENST00000303406 TRAV13-2A0A0B4J235 113 aa13.18□□□□□ -0.3
HOXC4-201ENST00000303406 K7EIL1 84 aa13.18□□□□□ -0.3
HOXC4-201ENST00000303406 SMCPP49901 116 aaPredicted RBP13.18□□□□□ -0.3
HOXC4-201ENST00000303406 KLK12Q9UKR0 248 aa13.18□□□□□ -0.3
HOXC4-201ENST00000303406 IGLV10-54A0A075B6I4 117 aa13.18□□□□□ -0.3
HOXC4-201ENST00000303406 CKS1BP61024 79 aa13.18□□□□□ -0.3
HOXC4-201ENST00000303406 COX17Q14061 63 aa13.18□□□□□ -0.3
HOXC4-201ENST00000303406 ENHOQ6UWT2 76 aa13.18□□□□□ -0.3
HOXC4-201ENST00000303406 GAGE12HA6NDE8 117 aa13.17□□□□□ -0.3
HOXC4-201ENST00000303406 SND1-IT1Q9HBX3 110 aa13.17□□□□□ -0.3
HOXC4-201ENST00000303406 CRPP02741 224 aa13.16□□□□□ -0.3
HOXC4-201ENST00000303406 CCL18P55774 89 aa13.16□□□□□ -0.3
HOXC4-201ENST00000303406 MUC7Q8TAX7 377 aa13.16□□□□□ -0.3
HOXC4-201ENST00000303406 MAST4O15021 2626 aa13.15□□□□□ -0.3
HOXC4-201ENST00000303406 TRAV10A0A0B4J240 114 aa13.15□□□□□ -0.3
HOXC4-201ENST00000303406 ETDBQ3ZM63 59 aa13.15□□□□□ -0.3
HOXC4-201ENST00000303406 J3QR89 54 aa13.14□□□□□ -0.31
HOXC4-201ENST00000303406 LINC01620Q4KN68 170 aa13.14□□□□□ -0.31
HOXC4-201ENST00000303406 WFDC10BQ8IUB3 73 aa13.14□□□□□ -0.31
HOXC4-201ENST00000303406 MTURNQ8N3F0 131 aa13.14□□□□□ -0.31
HOXC4-201ENST00000303406 PFN2P35080 140 aa13.13□□□□□ -0.31
HOXC4-201ENST00000303406 ESRGQ1W209 222 aa13.13□□□□□ -0.31
HOXC4-201ENST00000303406 C15orf53Q8NAA6 179 aa13.13□□□□□ -0.31
HOXC4-201ENST00000303406 ANK2Q01484 3957 aa13.13□□□□□ -0.31
HOXC4-201ENST00000303406 LST1O00453 97 aa13.13□□□□□ -0.31
HOXC4-201ENST00000303406 C2orf82Q6UX34 121 aa13.13□□□□□ -0.31
HOXC4-201ENST00000303406 SLC25A20O43772 301 aa13.12□□□□□ -0.31
HOXC4-201ENST00000303406 LINC01556Q5JQF7 62 aa13.12□□□□□ -0.31
HOXC4-201ENST00000303406 CBY1Q9Y3M2 126 aa13.12□□□□□ -0.31
HOXC4-201ENST00000303406 IGKV2-28A0A075B6P5 120 aa13.11□□□□□ -0.31
HOXC4-201ENST00000303406 IGKV2D-28P01615 120 aa13.11□□□□□ -0.31
HOXC4-201ENST00000303406 SPAG11BQ08648 103 aa13.11□□□□□ -0.31
HOXC4-201ENST00000303406 TEN1Q86WV5 123 aa13.11□□□□□ -0.31
HOXC4-201ENST00000303406 UBE2WQ96B02 151 aa13.11□□□□□ -0.31
HOXC4-201ENST00000303406 TRBV10-2A0A0K0K1G8 114 aa13.1□□□□□ -0.31
HOXC4-201ENST00000303406 C9JAW5 83 aa13.1□□□□□ -0.31
HOXC4-201ENST00000303406 RPL28P46779 137 aaKnown RBP13.1□□□□□ -0.31
HOXC4-201ENST00000303406 RNF151Q2KHN1 245 aa13.1□□□□□ -0.31
HOXC4-201ENST00000303406 LINC00337Q8N6G1 96 aa13.08□□□□□ -0.31
HOXC4-201ENST00000303406 GVQW2A0A096LPI5 108 aaPredicted RBP13.08□□□□□ -0.32
HOXC4-201ENST00000303406 NDUFC2O95298 119 aa13.08□□□□□ -0.32
HOXC4-201ENST00000303406 PRB2P02812 416 aaPredicted RBP13.08□□□□□ -0.32
HOXC4-201ENST00000303406 DEFB121Q5J5C9 76 aa13.08□□□□□ -0.32
HOXC4-201ENST00000303406 H3BT86 120 aa13.07□□□□□ -0.32
HOXC4-201ENST00000303406 KRTAP26-1Q6PEX3 210 aa13.07□□□□□ -0.32
HOXC4-201ENST00000303406 ANKRD29Q8N6D5 301 aa13.07□□□□□ -0.32
HOXC4-201ENST00000303406 PPDPFLQ8WWR9 84 aa13.07□□□□□ -0.32
HOXC4-201ENST00000303406 VPS25Q9BRG1 176 aa13.07□□□□□ -0.32
HOXC4-201ENST00000303406 PKD1L1Q8TDX9 2849 aa13.05□□□□□ -0.32
HOXC4-201ENST00000303406 DNAH10OSP0CZ25 163 aa13.05□□□□□ -0.32
HOXC4-201ENST00000303406 CLEC2BQ92478 149 aa13.05□□□□□ -0.32
HOXC4-201ENST00000303406 NTN5Q8WTR8 489 aaPredicted RBP13.04□□□□□ -0.32
HOXC4-201ENST00000303406 CARD19Q96LW7 228 aa13.03□□□□□ -0.32
HOXC4-201ENST00000303406 COL6A5A8TX70 2615 aa13.03□□□□□ -0.32
HOXC4-201ENST00000303406 TRACP01848 142 aa13.03□□□□□ -0.32
HOXC4-201ENST00000303406 MRAPQ8TCY5 172 aa13.02□□□□□ -0.33
HOXC4-201ENST00000303406 F8WDY8 70 aa13.01□□□□□ -0.33
HOXC4-201ENST00000303406 UNQ6190/PRO20217Q6UXQ8 127 aa13.01□□□□□ -0.33
HOXC4-201ENST00000303406 C6orf223Q8N319 242 aa13□□□□□ -0.33
HOXC4-201ENST00000303406 MDFIQ99750 246 aa13□□□□□ -0.33
HOXC4-201ENST00000303406 H0YGX0 51 aa12.99□□□□□ -0.33
HOXC4-201ENST00000303406 C4orf48Q5BLP8 95 aa12.99□□□□□ -0.33
HOXC4-201ENST00000303406 C10orf25Q5T742 122 aa12.99□□□□□ -0.33
HOXC4-201ENST00000303406 SMIM11BQ8TCY0 68 aa12.99□□□□□ -0.33
HOXC4-201ENST00000303406 C1orf43Q9BWL3 253 aa12.99□□□□□ -0.33
HOXC4-201ENST00000303406 C2orf48Q96LS8 159 aa12.98□□□□□ -0.33
HOXC4-201ENST00000303406 HUWE1Q7Z6Z7 4374 aaKnown RBP12.98□□□□□ -0.33
HOXC4-201ENST00000303406 TENM3Q9P273 2699 aa12.98□□□□□ -0.33
HOXC4-201ENST00000303406 C9orf116Q5BN46 136 aaPredicted RBP12.97□□□□□ -0.33
HOXC4-201ENST00000303406 ZNF561-AS1K7EIQ3 104 aa12.96□□□□□ -0.33
HOXC4-201ENST00000303406 UPK3BQ9BT76 320 aa12.96□□□□□ -0.33
HOXC4-201ENST00000303406 LINC00588Q9Y4M8 146 aa12.96□□□□□ -0.33
HOXC4-201ENST00000303406 C15orf56Q8N910 161 aa12.95□□□□□ -0.34
HOXC4-201ENST00000303406 OR13C6PQ8NH95 151 aa12.95□□□□□ -0.34
HOXC4-201ENST00000303406 C6orf48Q9UBA6 75 aa12.95□□□□□ -0.34
HOXC4-201ENST00000303406 TMEM126AQ9H061 195 aa12.94□□□□□ -0.34
HOXC4-201ENST00000303406 LINC00526Q96FQ7 95 aa12.93□□□□□ -0.34
HOXC4-201ENST00000303406 B9D2Q9BPU9 175 aa12.93□□□□□ -0.34
HOXC4-201ENST00000303406 FAM218AQ96MZ4 157 aa12.92□□□□□ -0.34
HOXC4-201ENST00000303406 CAMK2N2Q96S95 79 aa12.92□□□□□ -0.34
HOXC4-201ENST00000303406 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms