RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 CKS1BP61024 79 aa8.67□□□□□ -1.02
CCDC7-202ENST00000302316 CIRBPQ14011 172 aaKnown RBP8.67□□□□□ -1.02
CCDC7-202ENST00000302316 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
CCDC7-202ENST00000302316 RMI2Q96E14 147 aa8.67□□□□□ -1.02
CCDC7-202ENST00000302316 WWC2-AS2Q96NR7 200 aa8.67□□□□□ -1.02
CCDC7-202ENST00000302316 TM2D2Q9BX73 214 aa8.67□□□□□ -1.02
CCDC7-202ENST00000302316 TGP01266 2768 aa8.66□□□□□ -1.02
CCDC7-202ENST00000302316 LBHQ53QV2 105 aaPredicted RBP8.66□□□□□ -1.02
CCDC7-202ENST00000302316 C2orf82Q6UX34 121 aa8.66□□□□□ -1.02
CCDC7-202ENST00000302316 TENM2Q9NT68 2774 aa8.66□□□□□ -1.02
CCDC7-202ENST00000302316 A0A0U1RRA0 63 aa8.66□□□□□ -1.02
CCDC7-202ENST00000302316 CXCL5P42830 114 aa8.66□□□□□ -1.02
CCDC7-202ENST00000302316 COL5A1-AS1Q5SY13 56 aa8.66□□□□□ -1.02
CCDC7-202ENST00000302316 KRTAP1-5Q9BYS1 174 aa8.66□□□□□ -1.02
CCDC7-202ENST00000302316 ADAMTSL4-AS1Q5T5F5 129 aa8.65□□□□□ -1.02
CCDC7-202ENST00000302316 SPANXDQ9BXN6 97 aa8.65□□□□□ -1.02
CCDC7-202ENST00000302316 SPANXCQ9NY87 97 aa8.65□□□□□ -1.02
CCDC7-202ENST00000302316 DNAH1Q9P2D7 4330 aa8.65□□□□□ -1.02
CCDC7-202ENST00000302316 SMIM13P0DJ93 91 aa8.65□□□□□ -1.03
CCDC7-202ENST00000302316 DAND5Q8N907 189 aa8.65□□□□□ -1.03
CCDC7-202ENST00000302316 LINC00526Q96FQ7 95 aa8.65□□□□□ -1.03
CCDC7-202ENST00000302316 A6NDN8 102 aa8.64□□□□□ -1.03
CCDC7-202ENST00000302316 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
CCDC7-202ENST00000302316 Q6ZVH6 145 aa8.63□□□□□ -1.03
CCDC7-202ENST00000302316 C6orf223Q8N319 242 aa8.63□□□□□ -1.03
CCDC7-202ENST00000302316 C15orf56Q8N910 161 aa8.63□□□□□ -1.03
CCDC7-202ENST00000302316 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
CCDC7-202ENST00000302316 NPC2P61916 151 aa8.63□□□□□ -1.03
CCDC7-202ENST00000302316 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
CCDC7-202ENST00000302316 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
CCDC7-202ENST00000302316 NHP2Q9NX24 153 aaKnown RBP8.63□□□□□ -1.03
CCDC7-202ENST00000302316 ERG28Q9UKR5 140 aa8.62□□□□□ -1.03
CCDC7-202ENST00000302316 COX11Q9Y6N1 276 aa8.62□□□□□ -1.03
CCDC7-202ENST00000302316 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
CCDC7-202ENST00000302316 LINC00158P58513 81 aa8.62□□□□□ -1.03
CCDC7-202ENST00000302316 PFN2P35080 140 aa8.61□□□□□ -1.03
CCDC7-202ENST00000302316 RPL24P83731 157 aaKnown RBP8.61□□□□□ -1.03
CCDC7-202ENST00000302316 CASC10Q5T4H9 136 aa8.61□□□□□ -1.03
CCDC7-202ENST00000302316 NTN5Q8WTR8 489 aaPredicted RBP8.61□□□□□ -1.03
CCDC7-202ENST00000302316 VPS13DQ5THJ4 4388 aa8.6□□□□□ -1.03
CCDC7-202ENST00000302316 GVQW2A0A096LPI5 108 aaPredicted RBP8.6□□□□□ -1.03
CCDC7-202ENST00000302316 K7ERJ3 54 aa8.6□□□□□ -1.03
CCDC7-202ENST00000302316 IFITM1P13164 125 aa8.6□□□□□ -1.03
CCDC7-202ENST00000302316 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
CCDC7-202ENST00000302316 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
CCDC7-202ENST00000302316 MIR7-3HGQ8N6C7 128 aa8.6□□□□□ -1.03
CCDC7-202ENST00000302316 A4D1N5 150 aa8.59□□□□□ -1.03
CCDC7-202ENST00000302316 LINC00308Q8TCZ7 52 aa8.59□□□□□ -1.03
CCDC7-202ENST00000302316 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
CCDC7-202ENST00000302316 COPS9Q8WXC6 57 aa8.59□□□□□ -1.03
CCDC7-202ENST00000302316 USP17L23D6RBM5 183 aa8.58□□□□□ -1.04
CCDC7-202ENST00000302316 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-202ENST00000302316 TAX1BP3O14907 124 aa8.57□□□□□ -1.04
CCDC7-202ENST00000302316 PSCAO43653 123 aa8.57□□□□□ -1.04
CCDC7-202ENST00000302316 EIF4EBP3O60516 100 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-202ENST00000302316 RAB37Q96AX2 223 aa8.57□□□□□ -1.04
CCDC7-202ENST00000302316 C2orf48Q96LS8 159 aa8.57□□□□□ -1.04
CCDC7-202ENST00000302316 A0A1B0GWB2 263 aa8.57□□□□□ -1.04
CCDC7-202ENST00000302316 COX17Q14061 63 aa8.57□□□□□ -1.04
CCDC7-202ENST00000302316 SOSTDC1Q6X4U4 206 aa8.57□□□□□ -1.04
CCDC7-202ENST00000302316 M0R2N4 97 aa8.56□□□□□ -1.04
CCDC7-202ENST00000302316 LECT2O14960 151 aa8.56□□□□□ -1.04
CCDC7-202ENST00000302316 C6orf48Q9UBA6 75 aa8.56□□□□□ -1.04
CCDC7-202ENST00000302316 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.56□□□□□ -1.04
CCDC7-202ENST00000302316 C3orf84H3BNL1 204 aa8.56□□□□□ -1.04
CCDC7-202ENST00000302316 Q6ZRU5 148 aa8.56□□□□□ -1.04
CCDC7-202ENST00000302316 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
CCDC7-202ENST00000302316 A0A1B0GV90 55 aa8.55□□□□□ -1.04
CCDC7-202ENST00000302316 CFC1BP0CG36 223 aa8.55□□□□□ -1.04
CCDC7-202ENST00000302316 CFC1P0CG37 223 aa8.55□□□□□ -1.04
CCDC7-202ENST00000302316 F8WDY8 70 aa8.54□□□□□ -1.04
CCDC7-202ENST00000302316 LY6G6CO95867 125 aa8.54□□□□□ -1.04
CCDC7-202ENST00000302316 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
CCDC7-202ENST00000302316 DNAH10Q8IVF4 4471 aa8.54□□□□□ -1.04
CCDC7-202ENST00000302316 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
CCDC7-202ENST00000302316 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
CCDC7-202ENST00000302316 LINC00476Q8WZB0 136 aa8.53□□□□□ -1.04
CCDC7-202ENST00000302316 WFDC2Q14508 124 aa8.52□□□□□ -1.05
CCDC7-202ENST00000302316 CARD19Q96LW7 228 aa8.52□□□□□ -1.05
CCDC7-202ENST00000302316 C9orf118A6NHY6 69 aa8.51□□□□□ -1.05
CCDC7-202ENST00000302316 NAA38Q9BRA0 125 aaKnown RBP8.51□□□□□ -1.05
CCDC7-202ENST00000302316 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
CCDC7-202ENST00000302316 PRO1854Q9UHT4 67 aa8.51□□□□□ -1.05
CCDC7-202ENST00000302316 H3BUT2 72 aa8.51□□□□□ -1.05
CCDC7-202ENST00000302316 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
CCDC7-202ENST00000302316 Q6ZR54 194 aa8.5□□□□□ -1.05
CCDC7-202ENST00000302316 Q6ZRN7 208 aaPredicted RBP8.5□□□□□ -1.05
CCDC7-202ENST00000302316 SLPIP03973 132 aa8.5□□□□□ -1.05
CCDC7-202ENST00000302316 NDUFC2-KCTD14E9PQ53 114 aa8.48□□□□□ -1.05
CCDC7-202ENST00000302316 TSPAN13O95857 204 aa8.48□□□□□ -1.05
CCDC7-202ENST00000302316 C14orf177Q52M58 125 aa8.48□□□□□ -1.05
CCDC7-202ENST00000302316 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
CCDC7-202ENST00000302316 H7C2G1 150 aa8.48□□□□□ -1.05
CCDC7-202ENST00000302316 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
CCDC7-202ENST00000302316 Q1RN00 199 aa8.47□□□□□ -1.05
CCDC7-202ENST00000302316 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
CCDC7-202ENST00000302316 RPL13AP40429 203 aaKnown RBP8.47□□□□□ -1.05
CCDC7-202ENST00000302316 XAGE1AQ9HD64 81 aa8.47□□□□□ -1.05
CCDC7-202ENST00000302316 ALMS1Q8TCU4 4167 aa8.46□□□□□ -1.05
CCDC7-202ENST00000302316 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms