RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PTPRBP23467 1997 aa13.68□□□□□ -0.22
TSR1-201ENST00000301364 LOC107984640A0A0U1RRK4 108 aa13.67□□□□□ -0.22
TSR1-201ENST00000301364 SMCPP49901 116 aaPredicted RBP13.67□□□□□ -0.22
TSR1-201ENST00000301364 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
TSR1-201ENST00000301364 A0A096LNI7 61 aa13.67□□□□□ -0.22
TSR1-201ENST00000301364 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.67□□□□□ -0.22
TSR1-201ENST00000301364 PCSK5Q92824 1860 aa13.66□□□□□ -0.22
TSR1-201ENST00000301364 TRAV7A0A075B6U4 112 aa13.66□□□□□ -0.22
TSR1-201ENST00000301364 LINC00337Q8N6G1 96 aa13.66□□□□□ -0.22
TSR1-201ENST00000301364 CHD8Q9HCK8 2581 aa13.66□□□□□ -0.22
TSR1-201ENST00000301364 IGLV5-45A0A087WSX0 123 aa13.65□□□□□ -0.22
TSR1-201ENST00000301364 A0A087WVE0 104 aa13.64□□□□□ -0.23
TSR1-201ENST00000301364 ZFYVE26Q68DK2 2539 aa13.64□□□□□ -0.23
TSR1-201ENST00000301364 MPLKIPQ8TAP9 179 aa13.64□□□□□ -0.23
TSR1-201ENST00000301364 C4orf48Q5BLP8 95 aa13.63□□□□□ -0.23
TSR1-201ENST00000301364 SPTBN4Q9H254 2564 aa13.63□□□□□ -0.23
TSR1-201ENST00000301364 TRBV7-7A0A0K0K1E9 115 aa13.63□□□□□ -0.23
TSR1-201ENST00000301364 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.63□□□□□ -0.23
TSR1-201ENST00000301364 RPL37AP8A6NKH3 93 aa13.62□□□□□ -0.23
TSR1-201ENST00000301364 IGHV3OR16-9A0A0B4J2B5 98 aa13.62□□□□□ -0.23
TSR1-201ENST00000301364 IGKV4-1P06312 121 aa13.62□□□□□ -0.23
TSR1-201ENST00000301364 WFDC10BQ8IUB3 73 aa13.61□□□□□ -0.23
TSR1-201ENST00000301364 NANOS2P60321 138 aaKnown RBP13.6□□□□□ -0.23
TSR1-201ENST00000301364 OXLD1Q5BKU9 147 aa13.6□□□□□ -0.23
TSR1-201ENST00000301364 PKD1L2Q7Z442 2459 aa13.6□□□□□ -0.23
TSR1-201ENST00000301364 PLA2G2AP14555 144 aa13.6□□□□□ -0.23
TSR1-201ENST00000301364 A0A0J9YWU9 116 aa13.6□□□□□ -0.23
TSR1-201ENST00000301364 F8WDY8 70 aa13.59□□□□□ -0.23
TSR1-201ENST00000301364 SBSPONQ8IVN8 264 aa13.59□□□□□ -0.23
TSR1-201ENST00000301364 SMR3AQ99954 134 aa13.59□□□□□ -0.23
TSR1-201ENST00000301364 LINC00575Q6W349 94 aa13.58□□□□□ -0.24
TSR1-201ENST00000301364 LINC00846Q9NV44 126 aa13.58□□□□□ -0.24
TSR1-201ENST00000301364 C2orf48Q96LS8 159 aa13.56□□□□□ -0.24
TSR1-201ENST00000301364 V9GYY9 64 aa13.56□□□□□ -0.24
TSR1-201ENST00000301364 COL27A1Q8IZC6 1860 aaPredicted RBP13.56□□□□□ -0.24
TSR1-201ENST00000301364 C6orf223Q8N319 242 aa13.55□□□□□ -0.24
TSR1-201ENST00000301364 WFDC13Q8IUB5 93 aa13.55□□□□□ -0.24
TSR1-201ENST00000301364 LRRK2Q5S007 2527 aa13.55□□□□□ -0.24
TSR1-201ENST00000301364 C1orf137Q5JT78 98 aa13.54□□□□□ -0.24
TSR1-201ENST00000301364 SMIM26A0A096LP01 95 aa13.53□□□□□ -0.24
TSR1-201ENST00000301364 Q8N3U1 123 aa13.53□□□□□ -0.24
TSR1-201ENST00000301364 PPDPFQ9H3Y8 114 aa13.53□□□□□ -0.24
TSR1-201ENST00000301364 LYPD5Q6UWN5 251 aa13.52□□□□□ -0.24
TSR1-201ENST00000301364 Q6ZTC4 211 aa13.52□□□□□ -0.24
TSR1-201ENST00000301364 FHL3Q13643 280 aa13.52□□□□□ -0.24
TSR1-201ENST00000301364 PRRC2CQ9Y520 2896 aaKnown RBP13.51□□□□□ -0.25
TSR1-201ENST00000301364 Q9UF83 564 aa13.51□□□□□ -0.25
TSR1-201ENST00000301364 ZNF706Q9Y5V0 76 aaPredicted RBP13.51□□□□□ -0.25
TSR1-201ENST00000301364 SERP1Q9Y6X1 66 aa13.51□□□□□ -0.25
TSR1-201ENST00000301364 MTORP42345 2549 aa13.5□□□□□ -0.25
TSR1-201ENST00000301364 RETNQ9HD89 108 aa13.5□□□□□ -0.25
TSR1-201ENST00000301364 LINC00474Q9P2X8 69 aa13.5□□□□□ -0.25
TSR1-201ENST00000301364 SOSTDC1Q6X4U4 206 aa13.49□□□□□ -0.25
TSR1-201ENST00000301364 Q6ZVQ6 151 aa13.49□□□□□ -0.25
TSR1-201ENST00000301364 ZNF462Q96JM2 2506 aa13.48□□□□□ -0.25
TSR1-201ENST00000301364 MRPL55Q7Z7F7 128 aaKnown RBP13.48□□□□□ -0.25
TSR1-201ENST00000301364 FAM30AQ9NZY2 134 aa13.47□□□□□ -0.25
TSR1-201ENST00000301364 DOPEY1Q5JWR5 2465 aa13.47□□□□□ -0.25
TSR1-201ENST00000301364 CELA1Q9UNI1 258 aa13.46□□□□□ -0.26
TSR1-201ENST00000301364 PLAC8L1A1L4L8 177 aa13.45□□□□□ -0.26
TSR1-201ENST00000301364 REG3GQ6UW15 175 aa13.45□□□□□ -0.26
TSR1-201ENST00000301364 A8MTW9 85 aa13.44□□□□□ -0.26
TSR1-201ENST00000301364 LINC01547P58512 204 aaPredicted RBP13.44□□□□□ -0.26
TSR1-201ENST00000301364 UTRNP46939 3433 aa13.44□□□□□ -0.26
TSR1-201ENST00000301364 MUC4Q99102 2169 aa13.44□□□□□ -0.26
TSR1-201ENST00000301364 POLQO75417 2590 aa13.43□□□□□ -0.26
TSR1-201ENST00000301364 PRYO14603 147 aa13.43□□□□□ -0.26
TSR1-201ENST00000301364 Q6ZRU5 148 aa13.43□□□□□ -0.26
TSR1-201ENST00000301364 FAM218AQ96MZ4 157 aa13.43□□□□□ -0.26
TSR1-201ENST00000301364 LITAFQ99732 161 aa13.43□□□□□ -0.26
TSR1-201ENST00000301364 CXCL6P80162 114 aa13.42□□□□□ -0.26
TSR1-201ENST00000301364 C10orf25Q5T742 122 aa13.42□□□□□ -0.26
TSR1-201ENST00000301364 SPTSSBQ8NFR3 76 aa13.41□□□□□ -0.26
TSR1-201ENST00000301364 PRR4Q16378 134 aa13.4□□□□□ -0.26
TSR1-201ENST00000301364 SEC61GP60059 68 aa13.4□□□□□ -0.26
TSR1-201ENST00000301364 C7orf33Q8WU49 177 aa13.39□□□□□ -0.27
TSR1-201ENST00000301364 FSHBP01225 129 aa13.39□□□□□ -0.27
TSR1-201ENST00000301364 ANKRD17O75179 2603 aaKnown RBP13.37□□□□□ -0.27
TSR1-201ENST00000301364 A0A0U1RQV1 116 aa13.37□□□□□ -0.27
TSR1-201ENST00000301364 HRCT1Q6UXD1 115 aa13.37□□□□□ -0.27
TSR1-201ENST00000301364 CASC2Q6XLA1 102 aa13.36□□□□□ -0.27
TSR1-201ENST00000301364 CRYGAP11844 174 aa13.36□□□□□ -0.27
TSR1-201ENST00000301364 TMEM254Q8TBM7 123 aa13.35□□□□□ -0.27
TSR1-201ENST00000301364 IGLV9-49A0A0B4J1Y8 123 aa13.35□□□□□ -0.27
TSR1-201ENST00000301364 Q8N9L7 120 aa13.35□□□□□ -0.27
TSR1-201ENST00000301364 X6R8D5 127 aa13.35□□□□□ -0.27
TSR1-201ENST00000301364 SPINK6Q6UWN8 80 aa13.34□□□□□ -0.27
TSR1-201ENST00000301364 BCE1O60756 84 aa13.34□□□□□ -0.27
TSR1-201ENST00000301364 LINC00208Q96KT6 92 aa13.33□□□□□ -0.28
TSR1-201ENST00000301364 M0R2N4 97 aa13.32□□□□□ -0.28
TSR1-201ENST00000301364 LRCOL1A6NCL2 159 aa13.32□□□□□ -0.28
TSR1-201ENST00000301364 SPATA3Q8NHX4 192 aa13.32□□□□□ -0.28
TSR1-201ENST00000301364 PCNTO95613 3336 aa13.32□□□□□ -0.28
TSR1-201ENST00000301364 TRBV7-6A0A0J9YX20 115 aa13.31□□□□□ -0.28
TSR1-201ENST00000301364 LINC01556Q5JQF7 62 aa13.3□□□□□ -0.28
TSR1-201ENST00000301364 C6orf48Q9UBA6 75 aa13.3□□□□□ -0.28
TSR1-201ENST00000301364 CHD7Q9P2D1 2997 aa13.3□□□□□ -0.28
TSR1-201ENST00000301364 Q9BRP9 147 aa13.29□□□□□ -0.28
TSR1-201ENST00000301364 A0A087WSZ3 146 aa13.29□□□□□ -0.28
TSR1-201ENST00000301364 H3BNG1 76 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms