RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 CCDC179H3BU77 68 aa10.93□□□□□ -0.66
CHAF1A-201ENST00000301280 CRPP02741 224 aa10.93□□□□□ -0.66
CHAF1A-201ENST00000301280 C3orf56Q8N813 242 aa10.93□□□□□ -0.66
CHAF1A-201ENST00000301280 CELA1Q9UNI1 258 aa10.93□□□□□ -0.66
CHAF1A-201ENST00000301280 TRAV8-4A0A0B4J246 113 aa10.92□□□□□ -0.66
CHAF1A-201ENST00000301280 UBE2WQ96B02 151 aa10.92□□□□□ -0.66
CHAF1A-201ENST00000301280 NDUFA1O15239 70 aa10.92□□□□□ -0.66
CHAF1A-201ENST00000301280 NDUFV3P56181 108 aaKnown RBP10.92□□□□□ -0.66
CHAF1A-201ENST00000301280 C16orf95Q9H693 158 aa10.92□□□□□ -0.66
CHAF1A-201ENST00000301280 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
CHAF1A-201ENST00000301280 KLK12Q9UKR0 248 aa10.92□□□□□ -0.66
CHAF1A-201ENST00000301280 KMT2BQ9UMN6 2715 aaPredicted RBP10.91□□□□□ -0.66
CHAF1A-201ENST00000301280 IGHV4-28A0A0C4DH34 117 aa10.91□□□□□ -0.66
CHAF1A-201ENST00000301280 TIRAPP58753 221 aa10.91□□□□□ -0.66
CHAF1A-201ENST00000301280 MRAPQ8TCY5 172 aa10.91□□□□□ -0.66
CHAF1A-201ENST00000301280 TIMM17BO60830 172 aa10.91□□□□□ -0.66
CHAF1A-201ENST00000301280 CSDC2Q9Y534 153 aaKnown RBP10.91□□□□□ -0.66
CHAF1A-201ENST00000301280 SNCGO76070 127 aa10.9□□□□□ -0.66
CHAF1A-201ENST00000301280 CSNK1G2-AS1Q8NCQ2 148 aa10.9□□□□□ -0.66
CHAF1A-201ENST00000301280 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
CHAF1A-201ENST00000301280 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
CHAF1A-201ENST00000301280 PPDPFQ9H3Y8 114 aa10.89□□□□□ -0.67
CHAF1A-201ENST00000301280 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
CHAF1A-201ENST00000301280 TRBV6-4A0A1B0GX49 114 aa10.89□□□□□ -0.67
CHAF1A-201ENST00000301280 DNAL4O96015 105 aa10.89□□□□□ -0.67
CHAF1A-201ENST00000301280 C15orf53Q8NAA6 179 aa10.89□□□□□ -0.67
CHAF1A-201ENST00000301280 SS18Q15532 418 aa10.88□□□□□ -0.67
CHAF1A-201ENST00000301280 PRO0255Q9UI72 69 aa10.88□□□□□ -0.67
CHAF1A-201ENST00000301280 LINC00959A0A1B0GUT2 108 aa10.87□□□□□ -0.67
CHAF1A-201ENST00000301280 IGLV5-39A0A0G2JS06 123 aa10.87□□□□□ -0.67
CHAF1A-201ENST00000301280 GAGE2AQ6NT46 116 aa10.87□□□□□ -0.67
CHAF1A-201ENST00000301280 C6orf223Q8N319 242 aa10.87□□□□□ -0.67
CHAF1A-201ENST00000301280 BAALC-AS2P0C853 105 aa10.86□□□□□ -0.67
CHAF1A-201ENST00000301280 CMC4P56277 68 aaPredicted RBP10.86□□□□□ -0.67
CHAF1A-201ENST00000301280 NCR3O14931 201 aa10.86□□□□□ -0.67
CHAF1A-201ENST00000301280 X6R8D5 127 aa10.86□□□□□ -0.67
CHAF1A-201ENST00000301280 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
CHAF1A-201ENST00000301280 FAM218AQ96MZ4 157 aa10.85□□□□□ -0.67
CHAF1A-201ENST00000301280 CCL18P55774 89 aa10.84□□□□□ -0.67
CHAF1A-201ENST00000301280 LECT2O14960 151 aa10.84□□□□□ -0.67
CHAF1A-201ENST00000301280 LST1O00453 97 aa10.84□□□□□ -0.67
CHAF1A-201ENST00000301280 IGHV4-30-4P0DP06 118 aa10.84□□□□□ -0.67
CHAF1A-201ENST00000301280 IFITM1P13164 125 aa10.84□□□□□ -0.67
CHAF1A-201ENST00000301280 HIGD2BQ4VC39 106 aa10.84□□□□□ -0.67
CHAF1A-201ENST00000301280 XAGE1AQ9HD64 81 aa10.84□□□□□ -0.67
CHAF1A-201ENST00000301280 C9orf66Q5T8R8 295 aa10.83□□□□□ -0.68
CHAF1A-201ENST00000301280 STAB2Q8WWQ8 2551 aa10.83□□□□□ -0.68
CHAF1A-201ENST00000301280 CHCHD10Q8WYQ3 142 aaPredicted RBP10.83□□□□□ -0.68
CHAF1A-201ENST00000301280 TENM2Q9NT68 2774 aa10.82□□□□□ -0.68
CHAF1A-201ENST00000301280 REG3AQ06141 175 aa10.81□□□□□ -0.68
CHAF1A-201ENST00000301280 DEFB121Q5J5C9 76 aa10.81□□□□□ -0.68
CHAF1A-201ENST00000301280 OVOL2Q9BRP0 275 aa10.81□□□□□ -0.68
CHAF1A-201ENST00000301280 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
CHAF1A-201ENST00000301280 SHISA2Q6UWI4 295 aa10.81□□□□□ -0.68
CHAF1A-201ENST00000301280 SMIM11BQ8TCY0 68 aa10.81□□□□□ -0.68
CHAF1A-201ENST00000301280 A0A087WYN8 130 aa10.8□□□□□ -0.68
CHAF1A-201ENST00000301280 Q6Q795 121 aa10.79□□□□□ -0.68
CHAF1A-201ENST00000301280 C14orf132Q9NPU4 83 aa10.79□□□□□ -0.68
CHAF1A-201ENST00000301280 SMCR5Q8TEV8 140 aa10.79□□□□□ -0.68
CHAF1A-201ENST00000301280 C22orf24Q9Y442 160 aa10.79□□□□□ -0.68
CHAF1A-201ENST00000301280 COX7A2LO14548 114 aa10.78□□□□□ -0.68
CHAF1A-201ENST00000301280 UNQ6190/PRO20217Q6UXQ8 127 aa10.78□□□□□ -0.68
CHAF1A-201ENST00000301280 H3BT86 120 aa10.78□□□□□ -0.68
CHAF1A-201ENST00000301280 APOC4P55056 127 aa10.78□□□□□ -0.68
CHAF1A-201ENST00000301280 S100A7L2Q5SY68 101 aa10.78□□□□□ -0.68
CHAF1A-201ENST00000301280 HERV-K104P63124 156 aa10.76□□□□□ -0.69
CHAF1A-201ENST00000301280 SPART-AS1P0CW21 52 aa10.76□□□□□ -0.69
CHAF1A-201ENST00000301280 IGKV2-28A0A075B6P5 120 aa10.76□□□□□ -0.69
CHAF1A-201ENST00000301280 IGKV2D-28P01615 120 aa10.76□□□□□ -0.69
CHAF1A-201ENST00000301280 C10orf25Q5T742 122 aa10.76□□□□□ -0.69
CHAF1A-201ENST00000301280 RPL18AQ02543 176 aaKnown RBP10.74□□□□□ -0.69
CHAF1A-201ENST00000301280 LINC00612Q8N6U2 182 aa10.74□□□□□ -0.69
CHAF1A-201ENST00000301280 C9orf129Q5T035 196 aaKnown RBP10.74□□□□□ -0.69
CHAF1A-201ENST00000301280 A0A087WZ39 114 aa10.73□□□□□ -0.69
CHAF1A-201ENST00000301280 TRAV13-2A0A0B4J235 113 aa10.73□□□□□ -0.69
CHAF1A-201ENST00000301280 IGKV3D-7A0A0C4DH55 119 aa10.73□□□□□ -0.69
CHAF1A-201ENST00000301280 SPAG11BQ08648 103 aa10.73□□□□□ -0.69
CHAF1A-201ENST00000301280 Q6ZTC4 211 aa10.73□□□□□ -0.69
CHAF1A-201ENST00000301280 COPS9Q8WXC6 57 aa10.73□□□□□ -0.69
CHAF1A-201ENST00000301280 NANOS2P60321 138 aaKnown RBP10.72□□□□□ -0.69
CHAF1A-201ENST00000301280 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
CHAF1A-201ENST00000301280 WFDC10BQ8IUB3 73 aa10.71□□□□□ -0.69
CHAF1A-201ENST00000301280 MRPL23Q16540 153 aaKnown RBP10.71□□□□□ -0.69
CHAF1A-201ENST00000301280 SMIM20Q8N5G0 67 aa10.71□□□□□ -0.7
CHAF1A-201ENST00000301280 IGKV2D-24A0A075B6R9 120 aa10.7□□□□□ -0.7
CHAF1A-201ENST00000301280 TRBV7-7A0A0K0K1E9 115 aa10.7□□□□□ -0.7
CHAF1A-201ENST00000301280 KIR2DL5BQ8NHK3 375 aa10.7□□□□□ -0.7
CHAF1A-201ENST00000301280 C6orf99Q4VX62 202 aa10.68□□□□□ -0.7
CHAF1A-201ENST00000301280 CYSRT1A8MQ03 144 aa10.68□□□□□ -0.7
CHAF1A-201ENST00000301280 FAM236AA0A1B0GUQ0 79 aa10.67□□□□□ -0.7
CHAF1A-201ENST00000301280 FAM236BA0A1B0GV22 79 aa10.67□□□□□ -0.7
CHAF1A-201ENST00000301280 KPRPQ5T749 579 aaPredicted RBP10.66□□□□□ -0.7
CHAF1A-201ENST00000301280 A0A0J9YWU9 116 aa10.66□□□□□ -0.7
CHAF1A-201ENST00000301280 LYRM9A8MSI8 78 aa10.66□□□□□ -0.7
CHAF1A-201ENST00000301280 IBA57-AS1B1ANH7 110 aa10.66□□□□□ -0.7
CHAF1A-201ENST00000301280 ZNF561-AS1K7EIQ3 104 aa10.66□□□□□ -0.7
CHAF1A-201ENST00000301280 SDIM1Q6ZPB5 146 aa10.66□□□□□ -0.7
CHAF1A-201ENST00000301280 WFDC9Q8NEX5 89 aa10.66□□□□□ -0.7
CHAF1A-201ENST00000301280 CSMD3Q7Z407 3707 aa10.66□□□□□ -0.7
CHAF1A-201ENST00000301280 HIST1H4AP62805 103 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms