RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CDC42SE2Q9NRR3 84 aa9.54□□□□□ -0.88
CTDP1-202ENST00000299543 C5orf38Q86SI9 138 aa9.53□□□□□ -0.88
CTDP1-202ENST00000299543 A0A096LPF7 62 aa9.52□□□□□ -0.88
CTDP1-202ENST00000299543 COX7A2LO14548 114 aa9.52□□□□□ -0.88
CTDP1-202ENST00000299543 SLPIP03973 132 aa9.52□□□□□ -0.88
CTDP1-202ENST00000299543 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.88
CTDP1-202ENST00000299543 HILS1P60008 231 aa9.52□□□□□ -0.88
CTDP1-202ENST00000299543 SOSTDC1Q6X4U4 206 aa9.52□□□□□ -0.88
CTDP1-202ENST00000299543 TENM4Q6N022 2769 aa9.52□□□□□ -0.89
CTDP1-202ENST00000299543 SERP2Q8N6R1 65 aa9.52□□□□□ -0.89
CTDP1-202ENST00000299543 TMEM258P61165 79 aa9.52□□□□□ -0.89
CTDP1-202ENST00000299543 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
CTDP1-202ENST00000299543 PFN2P35080 140 aa9.51□□□□□ -0.89
CTDP1-202ENST00000299543 LINC00158P58513 81 aa9.51□□□□□ -0.89
CTDP1-202ENST00000299543 NCR3O14931 201 aa9.5□□□□□ -0.89
CTDP1-202ENST00000299543 GIG44P09565 113 aaPredicted RBP9.5□□□□□ -0.89
CTDP1-202ENST00000299543 FHL2Q14192 279 aa9.5□□□□□ -0.89
CTDP1-202ENST00000299543 CLPSL2Q6UWE3 100 aa9.5□□□□□ -0.89
CTDP1-202ENST00000299543 IGLV5-45A0A087WSX0 123 aa9.5□□□□□ -0.89
CTDP1-202ENST00000299543 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
CTDP1-202ENST00000299543 GHRHP01286 108 aa9.49□□□□□ -0.89
CTDP1-202ENST00000299543 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
CTDP1-202ENST00000299543 IGLV4-60A0A075B6I1 120 aa9.49□□□□□ -0.89
CTDP1-202ENST00000299543 TIMM17BO60830 172 aa9.49□□□□□ -0.89
CTDP1-202ENST00000299543 MALP21145 153 aa9.49□□□□□ -0.89
CTDP1-202ENST00000299543 TMEM86BQ8N661 226 aa9.49□□□□□ -0.89
CTDP1-202ENST00000299543 LINC00846Q9NV44 126 aa9.49□□□□□ -0.89
CTDP1-202ENST00000299543 MIR7-3HGQ8N6C7 128 aa9.48□□□□□ -0.89
CTDP1-202ENST00000299543 BRK1Q8WUW1 75 aa9.48□□□□□ -0.89
CTDP1-202ENST00000299543 C16orf74Q96GX8 76 aa9.48□□□□□ -0.89
CTDP1-202ENST00000299543 UPK3BQ9BT76 320 aa9.48□□□□□ -0.89
CTDP1-202ENST00000299543 RPS28P62857 69 aaKnown RBP9.47□□□□□ -0.89
CTDP1-202ENST00000299543 UNC79Q9P2D8 2635 aa9.47□□□□□ -0.89
CTDP1-202ENST00000299543 LINC01561Q8N1V8 128 aa9.47□□□□□ -0.89
CTDP1-202ENST00000299543 VWFP04275 2813 aa9.47□□□□□ -0.89
CTDP1-202ENST00000299543 SMR3AQ99954 134 aa9.47□□□□□ -0.89
CTDP1-202ENST00000299543 IL17DQ8TAD2 202 aa9.46□□□□□ -0.89
CTDP1-202ENST00000299543 DEFB4AO15263 64 aa9.46□□□□□ -0.9
CTDP1-202ENST00000299543 CRPP02741 224 aa9.46□□□□□ -0.9
CTDP1-202ENST00000299543 PF4P02776 101 aa9.46□□□□□ -0.9
CTDP1-202ENST00000299543 COX7B2Q8TF08 81 aa9.46□□□□□ -0.9
CTDP1-202ENST00000299543 LECT2O14960 151 aa9.45□□□□□ -0.9
CTDP1-202ENST00000299543 PLAC8L1A1L4L8 177 aa9.45□□□□□ -0.9
CTDP1-202ENST00000299543 CXCL5P42830 114 aa9.45□□□□□ -0.9
CTDP1-202ENST00000299543 XCL1P47992 114 aa9.45□□□□□ -0.9
CTDP1-202ENST00000299543 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
CTDP1-202ENST00000299543 ATRQ13535 2644 aa9.45□□□□□ -0.9
CTDP1-202ENST00000299543 COPS9Q8WXC6 57 aa9.44□□□□□ -0.9
CTDP1-202ENST00000299543 SND1-IT1Q9HBX3 110 aa9.44□□□□□ -0.9
CTDP1-202ENST00000299543 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
CTDP1-202ENST00000299543 IGLV1-51P01701 117 aa9.44□□□□□ -0.9
CTDP1-202ENST00000299543 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
CTDP1-202ENST00000299543 ENHOQ6UWT2 76 aa9.44□□□□□ -0.9
CTDP1-202ENST00000299543 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
CTDP1-202ENST00000299543 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
CTDP1-202ENST00000299543 PAX4O43316 350 aa9.43□□□□□ -0.9
CTDP1-202ENST00000299543 TRBV6-8A0A0A6YYG3 113 aa9.43□□□□□ -0.9
CTDP1-202ENST00000299543 C6orf226Q5I0X4 101 aa9.43□□□□□ -0.9
CTDP1-202ENST00000299543 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
CTDP1-202ENST00000299543 GYPEP15421 78 aa9.43□□□□□ -0.9
CTDP1-202ENST00000299543 RBM3P98179 157 aaKnown RBP9.42□□□□□ -0.9
CTDP1-202ENST00000299543 A0A087WYN8 130 aa9.42□□□□□ -0.9
CTDP1-202ENST00000299543 CMC4P56277 68 aaPredicted RBP9.41□□□□□ -0.9
CTDP1-202ENST00000299543 C19orf73Q9NVV2 129 aa9.41□□□□□ -0.9
CTDP1-202ENST00000299543 LINC00482Q8N8I6 264 aa9.41□□□□□ -0.9
CTDP1-202ENST00000299543 MPLKIPQ8TAP9 179 aa9.41□□□□□ -0.9
CTDP1-202ENST00000299543 S100A7L2Q5SY68 101 aa9.4□□□□□ -0.9
CTDP1-202ENST00000299543 LINC00337Q8N6G1 96 aa9.4□□□□□ -0.9
CTDP1-202ENST00000299543 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.91
CTDP1-202ENST00000299543 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
CTDP1-202ENST00000299543 PDZD2O15018 2839 aa9.39□□□□□ -0.91
CTDP1-202ENST00000299543 HAMPP81172 84 aa9.39□□□□□ -0.91
CTDP1-202ENST00000299543 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
CTDP1-202ENST00000299543 TRAV13-2A0A0B4J235 113 aa9.38□□□□□ -0.91
CTDP1-202ENST00000299543 CCL18P55774 89 aa9.38□□□□□ -0.91
CTDP1-202ENST00000299543 HTN3P15516 51 aa9.37□□□□□ -0.91
CTDP1-202ENST00000299543 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
CTDP1-202ENST00000299543 KRTAP1-1Q07627 177 aa9.37□□□□□ -0.91
CTDP1-202ENST00000299543 OVOL2Q9BRP0 275 aa9.37□□□□□ -0.91
CTDP1-202ENST00000299543 PRO0628Q9UI54 55 aa9.37□□□□□ -0.91
CTDP1-202ENST00000299543 LINC00959A0A1B0GUT2 108 aa9.36□□□□□ -0.91
CTDP1-202ENST00000299543 SMIM11BQ8TCY0 68 aa9.36□□□□□ -0.91
CTDP1-202ENST00000299543 IGKV2-28A0A075B6P5 120 aa9.36□□□□□ -0.91
CTDP1-202ENST00000299543 IGKV2D-28P01615 120 aa9.36□□□□□ -0.91
CTDP1-202ENST00000299543 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
CTDP1-202ENST00000299543 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
CTDP1-202ENST00000299543 PRR3P79522 188 aaKnown RBP9.35□□□□□ -0.91
CTDP1-202ENST00000299543 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
CTDP1-202ENST00000299543 TENM1Q9UKZ4 2725 aa9.34□□□□□ -0.91
CTDP1-202ENST00000299543 SS18Q15532 418 aa9.34□□□□□ -0.91
CTDP1-202ENST00000299543 FAM222AQ5U5X8 452 aa9.34□□□□□ -0.91
CTDP1-202ENST00000299543 Q8N3U1 123 aa9.34□□□□□ -0.91
CTDP1-202ENST00000299543 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
CTDP1-202ENST00000299543 Q6JHZ5 121 aa9.33□□□□□ -0.92
CTDP1-202ENST00000299543 C16orf95Q9H693 158 aa9.33□□□□□ -0.92
CTDP1-202ENST00000299543 A0A087WZ39 114 aa9.33□□□□□ -0.92
CTDP1-202ENST00000299543 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
CTDP1-202ENST00000299543 RMI2Q96E14 147 aa9.33□□□□□ -0.92
CTDP1-202ENST00000299543 ANGP03950 147 aaKnown RBP9.32□□□□□ -0.92
CTDP1-202ENST00000299543 KRTAP10-3P60369 221 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms