RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 HTN3P15516 51 aa7.19□□□□□ -1.26
FOXN4-201ENST00000299162 DAZ2Q13117 558 aaKnown RBP7.18□□□□□ -1.26
FOXN4-201ENST00000299162 NTM-AS1Q6ZSK4 140 aa7.18□□□□□ -1.26
FOXN4-201ENST00000299162 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
FOXN4-201ENST00000299162 Q9H8V8 135 aa7.18□□□□□ -1.26
FOXN4-201ENST00000299162 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
FOXN4-201ENST00000299162 CRYGAP11844 174 aa7.18□□□□□ -1.26
FOXN4-201ENST00000299162 A8MTW9 85 aa7.17□□□□□ -1.26
FOXN4-201ENST00000299162 BAALC-AS2P0C853 105 aa7.17□□□□□ -1.26
FOXN4-201ENST00000299162 DEFB135Q30KP9 77 aa7.17□□□□□ -1.26
FOXN4-201ENST00000299162 TRACP01848 142 aa7.17□□□□□ -1.26
FOXN4-201ENST00000299162 V9GYY9 64 aa7.17□□□□□ -1.26
FOXN4-201ENST00000299162 H3BT86 120 aa7.17□□□□□ -1.26
FOXN4-201ENST00000299162 LST1O00453 97 aa7.17□□□□□ -1.26
FOXN4-201ENST00000299162 CIRBPQ14011 172 aaKnown RBP7.17□□□□□ -1.26
FOXN4-201ENST00000299162 BEAN1Q3B7T3 259 aa7.17□□□□□ -1.26
FOXN4-201ENST00000299162 A0A087WVE0 104 aa7.16□□□□□ -1.26
FOXN4-201ENST00000299162 PRIMA1Q86XR5 153 aa7.16□□□□□ -1.26
FOXN4-201ENST00000299162 FBN1P35555 2871 aaKnown RBP7.16□□□□□ -1.26
FOXN4-201ENST00000299162 MIAQ16674 131 aa7.16□□□□□ -1.26
FOXN4-201ENST00000299162 PIK3CD-AS1Q5SR53 167 aa7.16□□□□□ -1.26
FOXN4-201ENST00000299162 C19orf73Q9NVV2 129 aa7.16□□□□□ -1.26
FOXN4-201ENST00000299162 PFN2P35080 140 aa7.15□□□□□ -1.26
FOXN4-201ENST00000299162 HIST1H4AP62805 103 aaKnown RBP7.15□□□□□ -1.26
FOXN4-201ENST00000299162 MRPS36P82909 103 aaKnown RBP7.15□□□□□ -1.26
FOXN4-201ENST00000299162 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.27
FOXN4-201ENST00000299162 IL17DQ8TAD2 202 aa7.15□□□□□ -1.27
FOXN4-201ENST00000299162 C16orf95Q9H693 158 aa7.15□□□□□ -1.27
FOXN4-201ENST00000299162 C16orf74Q96GX8 76 aa7.14□□□□□ -1.27
FOXN4-201ENST00000299162 VSIG2Q96IQ7 327 aa7.14□□□□□ -1.27
FOXN4-201ENST00000299162 PLAC8L1A1L4L8 177 aa7.14□□□□□ -1.27
FOXN4-201ENST00000299162 ATP5G1P05496 136 aa7.14□□□□□ -1.27
FOXN4-201ENST00000299162 LITAFQ99732 161 aa7.14□□□□□ -1.27
FOXN4-201ENST00000299162 TMEM243Q9BU79 118 aa7.14□□□□□ -1.27
FOXN4-201ENST00000299162 C14orf132Q9NPU4 83 aa7.14□□□□□ -1.27
FOXN4-201ENST00000299162 DNAL4O96015 105 aa7.13□□□□□ -1.27
FOXN4-201ENST00000299162 LINC00242Q5T6M2 205 aa7.13□□□□□ -1.27
FOXN4-201ENST00000299162 PKD1L1Q8TDX9 2849 aa7.13□□□□□ -1.27
FOXN4-201ENST00000299162 C5orf38Q86SI9 138 aa7.13□□□□□ -1.27
FOXN4-201ENST00000299162 IGLV4-60A0A075B6I1 120 aa7.12□□□□□ -1.27
FOXN4-201ENST00000299162 GYPEP15421 78 aa7.12□□□□□ -1.27
FOXN4-201ENST00000299162 TIRAPP58753 221 aa7.12□□□□□ -1.27
FOXN4-201ENST00000299162 TMEM258P61165 79 aa7.12□□□□□ -1.27
FOXN4-201ENST00000299162 FAM240AA0A1B0GVK7 77 aa7.11□□□□□ -1.27
FOXN4-201ENST00000299162 WFDC9Q8NEX5 89 aa7.11□□□□□ -1.27
FOXN4-201ENST00000299162 SLPIP03973 132 aa7.11□□□□□ -1.27
FOXN4-201ENST00000299162 FAM222AQ5U5X8 452 aa7.11□□□□□ -1.27
FOXN4-201ENST00000299162 CSNK1G2-AS1Q8NCQ2 148 aa7.11□□□□□ -1.27
FOXN4-201ENST00000299162 IMUPQ9GZP8 106 aa7.11□□□□□ -1.27
FOXN4-201ENST00000299162 IGLV10-54A0A075B6I4 117 aa7.11□□□□□ -1.27
FOXN4-201ENST00000299162 XCL1P47992 114 aa7.1□□□□□ -1.27
FOXN4-201ENST00000299162 LINC00158P58513 81 aa7.1□□□□□ -1.27
FOXN4-201ENST00000299162 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
FOXN4-201ENST00000299162 Q8N3U1 123 aa7.1□□□□□ -1.27
FOXN4-201ENST00000299162 LINC00308Q8TCZ7 52 aa7.1□□□□□ -1.27
FOXN4-201ENST00000299162 FAM218AQ96MZ4 157 aa7.1□□□□□ -1.27
FOXN4-201ENST00000299162 FHL2Q14192 279 aa7.1□□□□□ -1.27
FOXN4-201ENST00000299162 LINC01561Q8N1V8 128 aa7.1□□□□□ -1.27
FOXN4-201ENST00000299162 UPK3BQ9BT76 320 aa7.09□□□□□ -1.27
FOXN4-201ENST00000299162 CDC42SE2Q9NRR3 84 aa7.09□□□□□ -1.27
FOXN4-201ENST00000299162 C1orf195Q5TG92 126 aa7.09□□□□□ -1.27
FOXN4-201ENST00000299162 TRBV10-1A0A0K0K1A3 114 aa7.09□□□□□ -1.27
FOXN4-201ENST00000299162 COX7A2LO14548 114 aa7.08□□□□□ -1.28
FOXN4-201ENST00000299162 CMC4P56277 68 aaPredicted RBP7.08□□□□□ -1.28
FOXN4-201ENST00000299162 LINC01600Q96MT4 127 aa7.08□□□□□ -1.28
FOXN4-201ENST00000299162 SMIM1B2RUZ4 78 aa7.08□□□□□ -1.28
FOXN4-201ENST00000299162 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
FOXN4-201ENST00000299162 NCR3O14931 201 aa7.07□□□□□ -1.28
FOXN4-201ENST00000299162 PAX4O43316 350 aa7.07□□□□□ -1.28
FOXN4-201ENST00000299162 DEFB121Q5J5C9 76 aa7.07□□□□□ -1.28
FOXN4-201ENST00000299162 C9orf129Q5T035 196 aaKnown RBP7.07□□□□□ -1.28
FOXN4-201ENST00000299162 SPANXDQ9BXN6 97 aa7.07□□□□□ -1.28
FOXN4-201ENST00000299162 SPANXCQ9NY87 97 aa7.07□□□□□ -1.28
FOXN4-201ENST00000299162 TRBV6-8A0A0A6YYG3 113 aa7.07□□□□□ -1.28
FOXN4-201ENST00000299162 BRK1Q8WUW1 75 aa7.06□□□□□ -1.28
FOXN4-201ENST00000299162 TRBV6-4A0A1B0GX49 114 aa7.06□□□□□ -1.28
FOXN4-201ENST00000299162 CRPP02741 224 aa7.06□□□□□ -1.28
FOXN4-201ENST00000299162 X6R8D5 127 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 TRAV23DV6A0A075B6W5 121 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 ACYP1P07311 99 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 CELA1Q9UNI1 258 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 TENM3Q9P273 2699 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 IGHV4-28A0A0C4DH34 117 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 ATOX1O00244 68 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 LECT2O14960 151 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 DAD1P61803 113 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 C9orf66Q5T8R8 295 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 RETNQ9HD89 108 aa7.05□□□□□ -1.28
FOXN4-201ENST00000299162 A0A087WYN8 130 aa7.04□□□□□ -1.28
FOXN4-201ENST00000299162 MIR7-3HGQ8N6C7 128 aa7.04□□□□□ -1.28
FOXN4-201ENST00000299162 OVOL2Q9BRP0 275 aa7.03□□□□□ -1.28
FOXN4-201ENST00000299162 NDUFA1O15239 70 aa7.03□□□□□ -1.28
FOXN4-201ENST00000299162 ANGP03950 147 aaKnown RBP7.03□□□□□ -1.28
FOXN4-201ENST00000299162 INAFM2P0DMQ5 153 aa7.03□□□□□ -1.28
FOXN4-201ENST00000299162 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
FOXN4-201ENST00000299162 RPL18AQ02543 176 aaKnown RBP7.03□□□□□ -1.28
FOXN4-201ENST00000299162 PRB2P02812 416 aaPredicted RBP7.02□□□□□ -1.29
FOXN4-201ENST00000299162 C6orf226Q5I0X4 101 aa7.02□□□□□ -1.29
FOXN4-201ENST00000299162 LINC00269Q8N2A0 174 aa7.02□□□□□ -1.29
FOXN4-201ENST00000299162 SND1-IT1Q9HBX3 110 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms