RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 MEIG1Q5JSS6 88 aa12.34□□□□□ -0.43
SEC61A2-201ENST00000298428 TM2D2Q9BX73 214 aa12.34□□□□□ -0.43
SEC61A2-201ENST00000298428 CXCL5P42830 114 aa12.33□□□□□ -0.44
SEC61A2-201ENST00000298428 C2orf82Q6UX34 121 aa12.33□□□□□ -0.44
SEC61A2-201ENST00000298428 FXYD2P54710 66 aa12.32□□□□□ -0.44
SEC61A2-201ENST00000298428 ADAMTSL4-AS1Q5T5F5 129 aa12.32□□□□□ -0.44
SEC61A2-201ENST00000298428 PTTG1IPP53801 180 aa12.31□□□□□ -0.44
SEC61A2-201ENST00000298428 LBHQ53QV2 105 aaPredicted RBP12.31□□□□□ -0.44
SEC61A2-201ENST00000298428 SPANXDQ9BXN6 97 aa12.31□□□□□ -0.44
SEC61A2-201ENST00000298428 SPANXCQ9NY87 97 aa12.31□□□□□ -0.44
SEC61A2-201ENST00000298428 A0A0U1RRA0 63 aa12.3□□□□□ -0.44
SEC61A2-201ENST00000298428 VPS13DQ5THJ4 4388 aa12.3□□□□□ -0.44
SEC61A2-201ENST00000298428 SMIM13P0DJ93 91 aa12.29□□□□□ -0.44
SEC61A2-201ENST00000298428 COL5A1-AS1Q5SY13 56 aa12.29□□□□□ -0.44
SEC61A2-201ENST00000298428 C15orf56Q8N910 161 aa12.29□□□□□ -0.44
SEC61A2-201ENST00000298428 LINC00526Q96FQ7 95 aa12.29□□□□□ -0.44
SEC61A2-201ENST00000298428 TTC32Q5I0X7 151 aa12.29□□□□□ -0.44
SEC61A2-201ENST00000298428 Q6ZVH6 145 aa12.29□□□□□ -0.44
SEC61A2-201ENST00000298428 C6orf223Q8N319 242 aa12.29□□□□□ -0.44
SEC61A2-201ENST00000298428 DAND5Q8N907 189 aa12.29□□□□□ -0.44
SEC61A2-201ENST00000298428 NBDYA0A0U1RRE5 68 aa12.28□□□□□ -0.44
SEC61A2-201ENST00000298428 HIGD2BQ4VC39 106 aa12.28□□□□□ -0.44
SEC61A2-201ENST00000298428 COX11Q9Y6N1 276 aa12.28□□□□□ -0.44
SEC61A2-201ENST00000298428 A6NDN8 102 aa12.27□□□□□ -0.44
SEC61A2-201ENST00000298428 ZNF561-AS1K7EIQ3 104 aa12.27□□□□□ -0.44
SEC61A2-201ENST00000298428 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.44
SEC61A2-201ENST00000298428 ERG28Q9UKR5 140 aa12.27□□□□□ -0.45
SEC61A2-201ENST00000298428 CASC10Q5T4H9 136 aa12.26□□□□□ -0.45
SEC61A2-201ENST00000298428 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
SEC61A2-201ENST00000298428 TMEM238LA0A1B0GVL6 79 aa12.25□□□□□ -0.45
SEC61A2-201ENST00000298428 A6NJY4 79 aa12.25□□□□□ -0.45
SEC61A2-201ENST00000298428 LINC00158P58513 81 aa12.25□□□□□ -0.45
SEC61A2-201ENST00000298428 NPC2P61916 151 aa12.25□□□□□ -0.45
SEC61A2-201ENST00000298428 GVQW2A0A096LPI5 108 aaPredicted RBP12.25□□□□□ -0.45
SEC61A2-201ENST00000298428 PFN2P35080 140 aa12.25□□□□□ -0.45
SEC61A2-201ENST00000298428 UNQ6190/PRO20217Q6UXQ8 127 aa12.25□□□□□ -0.45
SEC61A2-201ENST00000298428 NHP2Q9NX24 153 aaKnown RBP12.25□□□□□ -0.45
SEC61A2-201ENST00000298428 IFITM1P13164 125 aa12.24□□□□□ -0.45
SEC61A2-201ENST00000298428 RPL24P83731 157 aaKnown RBP12.24□□□□□ -0.45
SEC61A2-201ENST00000298428 C10orf25Q5T742 122 aa12.24□□□□□ -0.45
SEC61A2-201ENST00000298428 MIR7-3HGQ8N6C7 128 aa12.23□□□□□ -0.45
SEC61A2-201ENST00000298428 USP17L23D6RBM5 183 aa12.23□□□□□ -0.45
SEC61A2-201ENST00000298428 LINC00308Q8TCZ7 52 aa12.23□□□□□ -0.45
SEC61A2-201ENST00000298428 CAMK2N2Q96S95 79 aa12.23□□□□□ -0.45
SEC61A2-201ENST00000298428 C3orf84H3BNL1 204 aa12.22□□□□□ -0.45
SEC61A2-201ENST00000298428 C2orf48Q96LS8 159 aa12.22□□□□□ -0.45
SEC61A2-201ENST00000298428 A4D1N5 150 aa12.21□□□□□ -0.45
SEC61A2-201ENST00000298428 K7ERJ3 54 aa12.21□□□□□ -0.45
SEC61A2-201ENST00000298428 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.45
SEC61A2-201ENST00000298428 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
SEC61A2-201ENST00000298428 PSCAO43653 123 aa12.21□□□□□ -0.46
SEC61A2-201ENST00000298428 EIF4EBP3O60516 100 aaPredicted RBP12.21□□□□□ -0.46
SEC61A2-201ENST00000298428 COX17Q14061 63 aa12.21□□□□□ -0.46
SEC61A2-201ENST00000298428 DNAH10Q8IVF4 4471 aa12.2□□□□□ -0.46
SEC61A2-201ENST00000298428 SOSTDC1Q6X4U4 206 aa12.19□□□□□ -0.46
SEC61A2-201ENST00000298428 C6orf48Q9UBA6 75 aa12.19□□□□□ -0.46
SEC61A2-201ENST00000298428 A0A1B0GWB2 263 aa12.19□□□□□ -0.46
SEC61A2-201ENST00000298428 F8WDY8 70 aa12.19□□□□□ -0.46
SEC61A2-201ENST00000298428 M0R2N4 97 aa12.19□□□□□ -0.46
SEC61A2-201ENST00000298428 LECT2O14960 151 aa12.19□□□□□ -0.46
SEC61A2-201ENST00000298428 TRBV30A0A0K0K1B3 111 aa12.18□□□□□ -0.46
SEC61A2-201ENST00000298428 TAX1BP3O14907 124 aa12.18□□□□□ -0.46
SEC61A2-201ENST00000298428 Q6ZRU5 148 aa12.18□□□□□ -0.46
SEC61A2-201ENST00000298428 LY6G6CO95867 125 aa12.17□□□□□ -0.46
SEC61A2-201ENST00000298428 RAB37Q96AX2 223 aa12.17□□□□□ -0.46
SEC61A2-201ENST00000298428 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.17□□□□□ -0.46
SEC61A2-201ENST00000298428 CFC1BP0CG36 223 aa12.17□□□□□ -0.46
SEC61A2-201ENST00000298428 CFC1P0CG37 223 aa12.17□□□□□ -0.46
SEC61A2-201ENST00000298428 LINC00476Q8WZB0 136 aa12.16□□□□□ -0.46
SEC61A2-201ENST00000298428 PPDPFQ9H3Y8 114 aa12.16□□□□□ -0.46
SEC61A2-201ENST00000298428 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
SEC61A2-201ENST00000298428 WFDC2Q14508 124 aa12.14□□□□□ -0.47
SEC61A2-201ENST00000298428 KMT2AQ03164 3969 aa12.14□□□□□ -0.47
SEC61A2-201ENST00000298428 A0A0B4J2C4 111 aa12.13□□□□□ -0.47
SEC61A2-201ENST00000298428 Q6ZR54 194 aa12.13□□□□□ -0.47
SEC61A2-201ENST00000298428 A0A1B0GV90 55 aa12.12□□□□□ -0.47
SEC61A2-201ENST00000298428 Q6ZRN7 208 aaPredicted RBP12.12□□□□□ -0.47
SEC61A2-201ENST00000298428 ALMS1Q8TCU4 4167 aa12.12□□□□□ -0.47
SEC61A2-201ENST00000298428 CARD19Q96LW7 228 aa12.12□□□□□ -0.47
SEC61A2-201ENST00000298428 SLPIP03973 132 aa12.11□□□□□ -0.47
SEC61A2-201ENST00000298428 SND1-IT1Q9HBX3 110 aa12.11□□□□□ -0.47
SEC61A2-201ENST00000298428 PRO1854Q9UHT4 67 aa12.1□□□□□ -0.47
SEC61A2-201ENST00000298428 C9orf118A6NHY6 69 aa12.1□□□□□ -0.47
SEC61A2-201ENST00000298428 LOC107984156A0A0G2JMH3 177 aa12.09□□□□□ -0.47
SEC61A2-201ENST00000298428 ARL17AQ8IVW1 177 aa12.09□□□□□ -0.47
SEC61A2-201ENST00000298428 NAA38Q9BRA0 125 aaKnown RBP12.09□□□□□ -0.47
SEC61A2-201ENST00000298428 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
SEC61A2-201ENST00000298428 DNAH6Q9C0G6 4158 aa12.09□□□□□ -0.47
SEC61A2-201ENST00000298428 C14orf177Q52M58 125 aa12.08□□□□□ -0.48
SEC61A2-201ENST00000298428 NDUFC2-KCTD14E9PQ53 114 aa12.08□□□□□ -0.48
SEC61A2-201ENST00000298428 H3BUT2 72 aa12.08□□□□□ -0.48
SEC61A2-201ENST00000298428 RNF151Q2KHN1 245 aa12.08□□□□□ -0.48
SEC61A2-201ENST00000298428 LRCOL1A6NCL2 159 aa12.07□□□□□ -0.48
SEC61A2-201ENST00000298428 TSPAN13O95857 204 aa12.06□□□□□ -0.48
SEC61A2-201ENST00000298428 XAGE1AQ9HD64 81 aa12.04□□□□□ -0.48
SEC61A2-201ENST00000298428 DNAH2Q9P225 4427 aa12.04□□□□□ -0.48
SEC61A2-201ENST00000298428 IGKV2-28A0A075B6P5 120 aa12.04□□□□□ -0.48
SEC61A2-201ENST00000298428 H7C2G1 150 aa12.04□□□□□ -0.48
SEC61A2-201ENST00000298428 IGKV2D-28P01615 120 aa12.04□□□□□ -0.48
SEC61A2-201ENST00000298428 Q6ZRP5 223 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms