RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 IGKV2D-28P01615 120 aa8.1□□□□□ -1.11
RHO-201ENST00000296271 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
RHO-201ENST00000296271 FAM218AQ96MZ4 157 aa8.1□□□□□ -1.11
RHO-201ENST00000296271 LYRM9A8MSI8 78 aa8.09□□□□□ -1.11
RHO-201ENST00000296271 APOC4P55056 127 aa8.09□□□□□ -1.11
RHO-201ENST00000296271 XGP55808 180 aa8.09□□□□□ -1.11
RHO-201ENST00000296271 KRTAP10-11P60412 298 aa8.09□□□□□ -1.11
RHO-201ENST00000296271 HERV-K104P63124 156 aa8.09□□□□□ -1.11
RHO-201ENST00000296271 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
RHO-201ENST00000296271 TRBV10-2A0A0K0K1G8 114 aa8.09□□□□□ -1.12
RHO-201ENST00000296271 LST1O00453 97 aa8.09□□□□□ -1.12
RHO-201ENST00000296271 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.12
RHO-201ENST00000296271 CCL18P55774 89 aa8.09□□□□□ -1.12
RHO-201ENST00000296271 RNF183Q96D59 192 aa8.09□□□□□ -1.12
RHO-201ENST00000296271 C6orf226Q5I0X4 101 aa8.08□□□□□ -1.12
RHO-201ENST00000296271 NBEAL1Q6ZS30 2694 aa8.08□□□□□ -1.12
RHO-201ENST00000296271 COX6CP09669 75 aa8.08□□□□□ -1.12
RHO-201ENST00000296271 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
RHO-201ENST00000296271 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
RHO-201ENST00000296271 WFDC9Q8NEX5 89 aa8.08□□□□□ -1.12
RHO-201ENST00000296271 SND1-IT1Q9HBX3 110 aa8.08□□□□□ -1.12
RHO-201ENST00000296271 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
RHO-201ENST00000296271 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
RHO-201ENST00000296271 A0A1B0GUV1 79 aa8.06□□□□□ -1.12
RHO-201ENST00000296271 ATP5G1P05496 136 aa8.06□□□□□ -1.12
RHO-201ENST00000296271 SS18Q15532 418 aa8.06□□□□□ -1.12
RHO-201ENST00000296271 REG3AQ06141 175 aa8.05□□□□□ -1.12
RHO-201ENST00000296271 KRTAP24-1Q3LI83 254 aa8.05□□□□□ -1.12
RHO-201ENST00000296271 CHCHD10Q8WYQ3 142 aaPredicted RBP8.05□□□□□ -1.12
RHO-201ENST00000296271 Q9HAA7 133 aa8.05□□□□□ -1.12
RHO-201ENST00000296271 COX7A2LO14548 114 aa8.04□□□□□ -1.12
RHO-201ENST00000296271 C6orf223Q8N319 242 aa8.04□□□□□ -1.12
RHO-201ENST00000296271 SPART-AS1P0CW21 52 aa8.04□□□□□ -1.12
RHO-201ENST00000296271 MIFP14174 115 aa8.04□□□□□ -1.12
RHO-201ENST00000296271 KIAA0087Q14695 138 aa8.03□□□□□ -1.12
RHO-201ENST00000296271 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
RHO-201ENST00000296271 UBE2WQ96B02 151 aa8.03□□□□□ -1.12
RHO-201ENST00000296271 CRPP02741 224 aa8.02□□□□□ -1.13
RHO-201ENST00000296271 Q8NDZ9 215 aa8.02□□□□□ -1.13
RHO-201ENST00000296271 KLK12Q9UKR0 248 aa8.02□□□□□ -1.13
RHO-201ENST00000296271 CYSRT1A8MQ03 144 aa8.02□□□□□ -1.13
RHO-201ENST00000296271 IBA57-AS1B1ANH7 110 aa8.02□□□□□ -1.13
RHO-201ENST00000296271 PRB2P02812 416 aaPredicted RBP8.02□□□□□ -1.13
RHO-201ENST00000296271 C10orf25Q5T742 122 aa8.02□□□□□ -1.13
RHO-201ENST00000296271 A0A087WYN8 130 aa8.01□□□□□ -1.13
RHO-201ENST00000296271 OR13C6PQ8NH95 151 aa8.01□□□□□ -1.13
RHO-201ENST00000296271 C22orf24Q9Y442 160 aa8.01□□□□□ -1.13
RHO-201ENST00000296271 M0QXV9 152 aa8□□□□□ -1.13
RHO-201ENST00000296271 CD164L2Q6UWJ8 174 aa8□□□□□ -1.13
RHO-201ENST00000296271 CKS1BP61024 79 aa8□□□□□ -1.13
RHO-201ENST00000296271 MRPL23Q16540 153 aaKnown RBP8□□□□□ -1.13
RHO-201ENST00000296271 C9orf129Q5T035 196 aaKnown RBP8□□□□□ -1.13
RHO-201ENST00000296271 Q6ZTC4 211 aa8□□□□□ -1.13
RHO-201ENST00000296271 Q8IZM0 81 aa8□□□□□ -1.13
RHO-201ENST00000296271 MALP21145 153 aa7.99□□□□□ -1.13
RHO-201ENST00000296271 A0A1B0GV72 72 aa7.99□□□□□ -1.13
RHO-201ENST00000296271 H3BT86 120 aa7.99□□□□□ -1.13
RHO-201ENST00000296271 WIPF1O43516 503 aa7.99□□□□□ -1.13
RHO-201ENST00000296271 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
RHO-201ENST00000296271 WFDC10BQ8IUB3 73 aa7.99□□□□□ -1.13
RHO-201ENST00000296271 COPS9Q8WXC6 57 aa7.99□□□□□ -1.13
RHO-201ENST00000296271 TRAV13-2A0A0B4J235 113 aa7.98□□□□□ -1.13
RHO-201ENST00000296271 ENHOQ6UWT2 76 aa7.98□□□□□ -1.13
RHO-201ENST00000296271 BAHCC1Q9P281 2608 aa7.98□□□□□ -1.13
RHO-201ENST00000296271 SLPIP03973 132 aa7.98□□□□□ -1.13
RHO-201ENST00000296271 RPL28P46779 137 aaKnown RBP7.98□□□□□ -1.13
RHO-201ENST00000296271 LYPD5Q6UWN5 251 aa7.98□□□□□ -1.13
RHO-201ENST00000296271 LINC01600Q96MT4 127 aa7.98□□□□□ -1.13
RHO-201ENST00000296271 BAALC-AS2P0C853 105 aa7.97□□□□□ -1.13
RHO-201ENST00000296271 MGAM2Q2M2H8 2515 aa7.97□□□□□ -1.13
RHO-201ENST00000296271 LELP1Q5T871 98 aa7.97□□□□□ -1.13
RHO-201ENST00000296271 TTC32Q5I0X7 151 aa7.96□□□□□ -1.13
RHO-201ENST00000296271 C3orf56Q8N813 242 aa7.96□□□□□ -1.14
RHO-201ENST00000296271 DNAH3Q8TD57 4116 aa7.96□□□□□ -1.14
RHO-201ENST00000296271 NANOS2P60321 138 aaKnown RBP7.95□□□□□ -1.14
RHO-201ENST00000296271 KPRPQ5T749 579 aaPredicted RBP7.95□□□□□ -1.14
RHO-201ENST00000296271 A0A0J9YWU9 116 aa7.95□□□□□ -1.14
RHO-201ENST00000296271 NCR3O14931 201 aa7.95□□□□□ -1.14
RHO-201ENST00000296271 LECT2O14960 151 aa7.94□□□□□ -1.14
RHO-201ENST00000296271 SPAG11BQ08648 103 aa7.94□□□□□ -1.14
RHO-201ENST00000296271 C15orf53Q8NAA6 179 aa7.94□□□□□ -1.14
RHO-201ENST00000296271 TRACP01848 142 aa7.93□□□□□ -1.14
RHO-201ENST00000296271 SCGB1A1P11684 91 aa7.93□□□□□ -1.14
RHO-201ENST00000296271 HIGD2BQ4VC39 106 aa7.92□□□□□ -1.14
RHO-201ENST00000296271 PRR34Q9NV39 138 aa7.92□□□□□ -1.14
RHO-201ENST00000296271 ESRGQ1W209 222 aa7.92□□□□□ -1.14
RHO-201ENST00000296271 PPDPFQ9H3Y8 114 aa7.91□□□□□ -1.14
RHO-201ENST00000296271 DEFB121Q5J5C9 76 aa7.91□□□□□ -1.14
RHO-201ENST00000296271 XAGE1AQ9HD64 81 aa7.91□□□□□ -1.14
RHO-201ENST00000296271 SMCR5Q8TEV8 140 aa7.9□□□□□ -1.14
RHO-201ENST00000296271 EGFEM1PQ0D2K5 195 aa7.9□□□□□ -1.15
RHO-201ENST00000296271 LYSTQ99698 3801 aa7.89□□□□□ -1.15
RHO-201ENST00000296271 LINC01561Q8N1V8 128 aa7.89□□□□□ -1.15
RHO-201ENST00000296271 HUWE1Q7Z6Z7 4374 aaKnown RBP7.89□□□□□ -1.15
RHO-201ENST00000296271 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
RHO-201ENST00000296271 MRAPQ8TCY5 172 aa7.89□□□□□ -1.15
RHO-201ENST00000296271 SNCGO76070 127 aa7.88□□□□□ -1.15
RHO-201ENST00000296271 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
RHO-201ENST00000296271 KLK5Q9Y337 293 aaPredicted RBP7.88□□□□□ -1.15
RHO-201ENST00000296271 DNAL4O96015 105 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms