RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HERVK_113P63121 156 aa10.12□□□□□ -0.79
CCDC140-201ENST00000295226 SPCS1Q9Y6A9 102 aa10.12□□□□□ -0.79
CCDC140-201ENST00000295226 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
CCDC140-201ENST00000295226 XCL1P47992 114 aa10.12□□□□□ -0.79
CCDC140-201ENST00000295226 COX6A2Q02221 97 aa10.11□□□□□ -0.79
CCDC140-201ENST00000295226 MIAQ16674 131 aa10.11□□□□□ -0.79
CCDC140-201ENST00000295226 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
CCDC140-201ENST00000295226 K7ERJ3 54 aa10.1□□□□□ -0.79
CCDC140-201ENST00000295226 SS18Q15532 418 aa10.1□□□□□ -0.79
CCDC140-201ENST00000295226 DNAH2Q9P225 4427 aa10.1□□□□□ -0.79
CCDC140-201ENST00000295226 GAGE12HA6NDE8 117 aa10.09□□□□□ -0.79
CCDC140-201ENST00000295226 LINC00242Q5T6M2 205 aa10.09□□□□□ -0.79
CCDC140-201ENST00000295226 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
CCDC140-201ENST00000295226 C1orf43Q9BWL3 253 aa10.09□□□□□ -0.79
CCDC140-201ENST00000295226 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
CCDC140-201ENST00000295226 RYR2Q92736 4967 aa10.08□□□□□ -0.8
CCDC140-201ENST00000295226 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
CCDC140-201ENST00000295226 RPL24P83731 157 aaKnown RBP10.08□□□□□ -0.8
CCDC140-201ENST00000295226 LYRM7Q5U5X0 104 aa10.08□□□□□ -0.8
CCDC140-201ENST00000295226 A0A0J9YXY3 114 aa10.07□□□□□ -0.8
CCDC140-201ENST00000295226 C1orf134Q5TEV5 83 aa10.07□□□□□ -0.8
CCDC140-201ENST00000295226 Q6ZRN7 208 aaPredicted RBP10.07□□□□□ -0.8
CCDC140-201ENST00000295226 NDUFA12Q9UI09 145 aa10.07□□□□□ -0.8
CCDC140-201ENST00000295226 TIMM17BO60830 172 aa10.06□□□□□ -0.8
CCDC140-201ENST00000295226 FOXI1Q12951 378 aa10.06□□□□□ -0.8
CCDC140-201ENST00000295226 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
CCDC140-201ENST00000295226 IGHV3-64A0A075B6Q5 118 aa10.06□□□□□ -0.8
CCDC140-201ENST00000295226 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
CCDC140-201ENST00000295226 NAA38Q9BRA0 125 aaKnown RBP10.06□□□□□ -0.8
CCDC140-201ENST00000295226 FRAS1Q86XX4 4008 aa10.05□□□□□ -0.8
CCDC140-201ENST00000295226 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
CCDC140-201ENST00000295226 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
CCDC140-201ENST00000295226 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
CCDC140-201ENST00000295226 RMI2Q96E14 147 aa10.05□□□□□ -0.8
CCDC140-201ENST00000295226 SPANXDQ9BXN6 97 aa10.05□□□□□ -0.8
CCDC140-201ENST00000295226 SPANXCQ9NY87 97 aa10.05□□□□□ -0.8
CCDC140-201ENST00000295226 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
CCDC140-201ENST00000295226 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
CCDC140-201ENST00000295226 LECT2O14960 151 aa10.04□□□□□ -0.8
CCDC140-201ENST00000295226 NDUFA1O15239 70 aa10.04□□□□□ -0.8
CCDC140-201ENST00000295226 PSCAO43653 123 aa10.04□□□□□ -0.8
CCDC140-201ENST00000295226 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
CCDC140-201ENST00000295226 A0A0B4J2C4 111 aa10.02□□□□□ -0.8
CCDC140-201ENST00000295226 RTL8CO15255 209 aa10.02□□□□□ -0.8
CCDC140-201ENST00000295226 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.8
CCDC140-201ENST00000295226 WFDC2Q14508 124 aa10.02□□□□□ -0.8
CCDC140-201ENST00000295226 COPS9Q8WXC6 57 aa10.02□□□□□ -0.8
CCDC140-201ENST00000295226 PRO1854Q9UHT4 67 aa10.02□□□□□ -0.8
CCDC140-201ENST00000295226 IFITM1P13164 125 aa10.02□□□□□ -0.81
CCDC140-201ENST00000295226 COX7A2LO14548 114 aa10.01□□□□□ -0.81
CCDC140-201ENST00000295226 APOMO95445 188 aa10.01□□□□□ -0.81
CCDC140-201ENST00000295226 CFC1BP0CG36 223 aa10.01□□□□□ -0.81
CCDC140-201ENST00000295226 CFC1P0CG37 223 aa10.01□□□□□ -0.81
CCDC140-201ENST00000295226 F8W1H4 67 aa10□□□□□ -0.81
CCDC140-201ENST00000295226 MUSTN1Q8IVN3 82 aa10□□□□□ -0.81
CCDC140-201ENST00000295226 LITAFQ99732 161 aa10□□□□□ -0.81
CCDC140-201ENST00000295226 A4D1N5 150 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 K7ERU9 68 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 TSPAN13O95857 204 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 HERV-K104P63124 156 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 DNAH17Q9UFH2 4485 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 RYR3Q15413 4870 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 A0A087WZ39 114 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 SMIM1B2RUZ4 78 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 MALP21145 153 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 TNP2Q05952 138 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 OCIAD2Q56VL3 154 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
CCDC140-201ENST00000295226 TRBV20-1A0A075B6N2 111 aa9.98□□□□□ -0.81
CCDC140-201ENST00000295226 LRCOL1A6NCL2 159 aa9.98□□□□□ -0.81
CCDC140-201ENST00000295226 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
CCDC140-201ENST00000295226 PPDPFQ9H3Y8 114 aa9.98□□□□□ -0.81
CCDC140-201ENST00000295226 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
CCDC140-201ENST00000295226 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
CCDC140-201ENST00000295226 PRSS2P07478 247 aa9.96□□□□□ -0.81
CCDC140-201ENST00000295226 SFTA2Q6UW10 78 aa9.96□□□□□ -0.81
CCDC140-201ENST00000295226 ERG28Q9UKR5 140 aa9.96□□□□□ -0.81
CCDC140-201ENST00000295226 A0A087WTM6 91 aa9.95□□□□□ -0.82
CCDC140-201ENST00000295226 FUSP35637 526 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC140-201ENST00000295226 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
CCDC140-201ENST00000295226 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
CCDC140-201ENST00000295226 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
CCDC140-201ENST00000295226 FAT2Q9NYQ8 4349 aa9.94□□□□□ -0.82
CCDC140-201ENST00000295226 ADAMTSL4-AS1Q5T5F5 129 aa9.93□□□□□ -0.82
CCDC140-201ENST00000295226 LINC01561Q8N1V8 128 aa9.93□□□□□ -0.82
CCDC140-201ENST00000295226 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
CCDC140-201ENST00000295226 CBY1Q9Y3M2 126 aa9.93□□□□□ -0.82
CCDC140-201ENST00000295226 H3BMG7 143 aa9.93□□□□□ -0.82
CCDC140-201ENST00000295226 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.92□□□□□ -0.82
CCDC140-201ENST00000295226 CFAP161Q6P656 301 aa9.92□□□□□ -0.82
CCDC140-201ENST00000295226 SCGB1C2P0DMR2 95 aa9.91□□□□□ -0.82
CCDC140-201ENST00000295226 SPAG11BQ08648 103 aa9.91□□□□□ -0.82
CCDC140-201ENST00000295226 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
CCDC140-201ENST00000295226 SLPIP03973 132 aa9.9□□□□□ -0.82
CCDC140-201ENST00000295226 PSMB2P49721 201 aa9.9□□□□□ -0.82
CCDC140-201ENST00000295226 KIAA0087Q14695 138 aa9.9□□□□□ -0.82
CCDC140-201ENST00000295226 GVQW2A0A096LPI5 108 aaPredicted RBP9.9□□□□□ -0.83
CCDC140-201ENST00000295226 TRBV30A0A0K0K1B3 111 aa9.9□□□□□ -0.83
CCDC140-201ENST00000295226 J3QR89 54 aa9.9□□□□□ -0.83
CCDC140-201ENST00000295226 ZNF561-AS1K7EIQ3 104 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms