RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SS18L2Q9UHA2 77 aa10.97□□□□□ -0.65
NCKIPSD-201ENST00000294129 B5MCH6 92 aa10.97□□□□□ -0.65
NCKIPSD-201ENST00000294129 COPS9Q8WXC6 57 aa10.97□□□□□ -0.65
NCKIPSD-201ENST00000294129 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
NCKIPSD-201ENST00000294129 NDUFV3P56181 108 aaKnown RBP10.96□□□□□ -0.65
NCKIPSD-201ENST00000294129 TTC32Q5I0X7 151 aa10.96□□□□□ -0.65
NCKIPSD-201ENST00000294129 LINC00612Q8N6U2 182 aa10.96□□□□□ -0.65
NCKIPSD-201ENST00000294129 A0A087WZ39 114 aa10.96□□□□□ -0.66
NCKIPSD-201ENST00000294129 STAB1Q9NY15 2570 aa10.96□□□□□ -0.66
NCKIPSD-201ENST00000294129 LINC00269Q8N2A0 174 aa10.95□□□□□ -0.66
NCKIPSD-201ENST00000294129 SMIM9A6NGZ8 99 aa10.95□□□□□ -0.66
NCKIPSD-201ENST00000294129 CRPP02741 224 aa10.95□□□□□ -0.66
NCKIPSD-201ENST00000294129 SS18Q15532 418 aa10.95□□□□□ -0.66
NCKIPSD-201ENST00000294129 ANGP03950 147 aaKnown RBP10.94□□□□□ -0.66
NCKIPSD-201ENST00000294129 APOC4P55056 127 aa10.94□□□□□ -0.66
NCKIPSD-201ENST00000294129 LINC00337Q8N6G1 96 aa10.94□□□□□ -0.66
NCKIPSD-201ENST00000294129 H3BT86 120 aa10.93□□□□□ -0.66
NCKIPSD-201ENST00000294129 COX7A2LO14548 114 aa10.93□□□□□ -0.66
NCKIPSD-201ENST00000294129 LINC01600Q96MT4 127 aa10.93□□□□□ -0.66
NCKIPSD-201ENST00000294129 CCL18P55774 89 aa10.93□□□□□ -0.66
NCKIPSD-201ENST00000294129 LYRM9A8MSI8 78 aa10.92□□□□□ -0.66
NCKIPSD-201ENST00000294129 OR13C6PQ8NH95 151 aa10.92□□□□□ -0.66
NCKIPSD-201ENST00000294129 FAM218AQ96MZ4 157 aa10.92□□□□□ -0.66
NCKIPSD-201ENST00000294129 IGKV2-28A0A075B6P5 120 aa10.92□□□□□ -0.66
NCKIPSD-201ENST00000294129 IGKV2D-28P01615 120 aa10.92□□□□□ -0.66
NCKIPSD-201ENST00000294129 CCDC179H3BU77 68 aa10.91□□□□□ -0.66
NCKIPSD-201ENST00000294129 SHISA2Q6UWI4 295 aa10.91□□□□□ -0.66
NCKIPSD-201ENST00000294129 Q9HAA7 133 aa10.91□□□□□ -0.66
NCKIPSD-201ENST00000294129 MAST4O15021 2626 aa10.91□□□□□ -0.66
NCKIPSD-201ENST00000294129 PKD1L1Q8TDX9 2849 aa10.91□□□□□ -0.66
NCKIPSD-201ENST00000294129 IGHV4-30-4P0DP06 118 aa10.9□□□□□ -0.66
NCKIPSD-201ENST00000294129 ATP5G1P05496 136 aa10.89□□□□□ -0.67
NCKIPSD-201ENST00000294129 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
NCKIPSD-201ENST00000294129 Q8NAQ8 132 aa10.89□□□□□ -0.67
NCKIPSD-201ENST00000294129 A0A1B0GUV1 79 aa10.88□□□□□ -0.67
NCKIPSD-201ENST00000294129 IBA57-AS1B1ANH7 110 aa10.88□□□□□ -0.67
NCKIPSD-201ENST00000294129 OXLD1Q5BKU9 147 aa10.88□□□□□ -0.67
NCKIPSD-201ENST00000294129 NOTCH1P46531 2555 aa10.87□□□□□ -0.67
NCKIPSD-201ENST00000294129 MALP21145 153 aa10.87□□□□□ -0.67
NCKIPSD-201ENST00000294129 REG3AQ06141 175 aa10.87□□□□□ -0.67
NCKIPSD-201ENST00000294129 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
NCKIPSD-201ENST00000294129 LINC00526Q96FQ7 95 aa10.87□□□□□ -0.67
NCKIPSD-201ENST00000294129 SMIM11BQ8TCY0 68 aa10.87□□□□□ -0.67
NCKIPSD-201ENST00000294129 PRR3P79522 188 aaKnown RBP10.86□□□□□ -0.67
NCKIPSD-201ENST00000294129 C9orf116Q5BN46 136 aaPredicted RBP10.86□□□□□ -0.67
NCKIPSD-201ENST00000294129 Q6Q795 121 aa10.86□□□□□ -0.67
NCKIPSD-201ENST00000294129 RETNQ9HD89 108 aa10.86□□□□□ -0.67
NCKIPSD-201ENST00000294129 BAALC-AS2P0C853 105 aa10.86□□□□□ -0.67
NCKIPSD-201ENST00000294129 SPART-AS1P0CW21 52 aa10.86□□□□□ -0.67
NCKIPSD-201ENST00000294129 CFAP161Q6P656 301 aa10.84□□□□□ -0.67
NCKIPSD-201ENST00000294129 MIFP14174 115 aa10.84□□□□□ -0.67
NCKIPSD-201ENST00000294129 A0A087WYN8 130 aa10.83□□□□□ -0.68
NCKIPSD-201ENST00000294129 TENM3Q9P273 2699 aa10.83□□□□□ -0.68
NCKIPSD-201ENST00000294129 DEFB121Q5J5C9 76 aa10.83□□□□□ -0.68
NCKIPSD-201ENST00000294129 Q8IZM0 81 aa10.83□□□□□ -0.68
NCKIPSD-201ENST00000294129 KLK12Q9UKR0 248 aa10.83□□□□□ -0.68
NCKIPSD-201ENST00000294129 FAM240AA0A1B0GVK7 77 aa10.82□□□□□ -0.68
NCKIPSD-201ENST00000294129 RPL28P46779 137 aaKnown RBP10.82□□□□□ -0.68
NCKIPSD-201ENST00000294129 CD164L2Q6UWJ8 174 aa10.82□□□□□ -0.68
NCKIPSD-201ENST00000294129 MRPL23Q16540 153 aaKnown RBP10.82□□□□□ -0.68
NCKIPSD-201ENST00000294129 DNAL4O96015 105 aa10.81□□□□□ -0.68
NCKIPSD-201ENST00000294129 C6orf223Q8N319 242 aa10.81□□□□□ -0.68
NCKIPSD-201ENST00000294129 TRACP01848 142 aa10.8□□□□□ -0.68
NCKIPSD-201ENST00000294129 SLPIP03973 132 aa10.79□□□□□ -0.68
NCKIPSD-201ENST00000294129 LECT2O14960 151 aa10.79□□□□□ -0.68
NCKIPSD-201ENST00000294129 FBN1P35555 2871 aaKnown RBP10.78□□□□□ -0.68
NCKIPSD-201ENST00000294129 C3orf56Q8N813 242 aa10.78□□□□□ -0.68
NCKIPSD-201ENST00000294129 WFDC9Q8NEX5 89 aa10.78□□□□□ -0.68
NCKIPSD-201ENST00000294129 KIAA0087Q14695 138 aa10.78□□□□□ -0.68
NCKIPSD-201ENST00000294129 SVIPQ8NHG7 77 aa10.77□□□□□ -0.68
NCKIPSD-201ENST00000294129 SMCR5Q8TEV8 140 aa10.77□□□□□ -0.69
NCKIPSD-201ENST00000294129 C10orf25Q5T742 122 aa10.77□□□□□ -0.69
NCKIPSD-201ENST00000294129 ANK2Q01484 3957 aa10.77□□□□□ -0.69
NCKIPSD-201ENST00000294129 NCR3O14931 201 aa10.76□□□□□ -0.69
NCKIPSD-201ENST00000294129 UNQ6190/PRO20217Q6UXQ8 127 aa10.76□□□□□ -0.69
NCKIPSD-201ENST00000294129 LELP1Q5T871 98 aa10.76□□□□□ -0.69
NCKIPSD-201ENST00000294129 COL6A5A8TX70 2615 aa10.76□□□□□ -0.69
NCKIPSD-201ENST00000294129 TRBV7-7A0A0K0K1E9 115 aa10.75□□□□□ -0.69
NCKIPSD-201ENST00000294129 FAM236AA0A1B0GUQ0 79 aa10.75□□□□□ -0.69
NCKIPSD-201ENST00000294129 FAM236BA0A1B0GV22 79 aa10.75□□□□□ -0.69
NCKIPSD-201ENST00000294129 KRTAP10-11P60412 298 aa10.75□□□□□ -0.69
NCKIPSD-201ENST00000294129 SPAG11BQ08648 103 aa10.75□□□□□ -0.69
NCKIPSD-201ENST00000294129 C22orf24Q9Y442 160 aa10.75□□□□□ -0.69
NCKIPSD-201ENST00000294129 C9orf129Q5T035 196 aaKnown RBP10.74□□□□□ -0.69
NCKIPSD-201ENST00000294129 PPDPFQ9H3Y8 114 aa10.74□□□□□ -0.69
NCKIPSD-201ENST00000294129 GAGE2AQ6NT46 116 aa10.74□□□□□ -0.69
NCKIPSD-201ENST00000294129 ACYP1P07311 99 aa10.73□□□□□ -0.69
NCKIPSD-201ENST00000294129 LYPD5Q6UWN5 251 aa10.72□□□□□ -0.69
NCKIPSD-201ENST00000294129 Q6ZTC4 211 aa10.72□□□□□ -0.69
NCKIPSD-201ENST00000294129 Q8NDZ9 215 aa10.72□□□□□ -0.69
NCKIPSD-201ENST00000294129 WFDC10BQ8IUB3 73 aa10.72□□□□□ -0.69
NCKIPSD-201ENST00000294129 SMIM20Q8N5G0 67 aa10.72□□□□□ -0.69
NCKIPSD-201ENST00000294129 CYSRT1A8MQ03 144 aa10.71□□□□□ -0.69
NCKIPSD-201ENST00000294129 H0YGX0 51 aa10.71□□□□□ -0.69
NCKIPSD-201ENST00000294129 ENHOQ6UWT2 76 aa10.71□□□□□ -0.69
NCKIPSD-201ENST00000294129 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
NCKIPSD-201ENST00000294129 KPRPQ5T749 579 aaPredicted RBP10.71□□□□□ -0.7
NCKIPSD-201ENST00000294129 KRTAP24-1Q3LI83 254 aa10.7□□□□□ -0.7
NCKIPSD-201ENST00000294129 CXCL5P42830 114 aa10.7□□□□□ -0.7
NCKIPSD-201ENST00000294129 LINC00643Q86TS7 51 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms