RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 UBE2WQ96B02 151 aa11.97□□□□□ -0.49
CCDC78-201ENST00000293889 KRTAP1-5Q9BYS1 174 aa11.97□□□□□ -0.49
CCDC78-201ENST00000293889 TRAV13-1A0A0B4J241 112 aa11.96□□□□□ -0.5
CCDC78-201ENST00000293889 A0A0B4J2C4 111 aa11.96□□□□□ -0.5
CCDC78-201ENST00000293889 NBDYA0A0U1RRE5 68 aa11.96□□□□□ -0.5
CCDC78-201ENST00000293889 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.5
CCDC78-201ENST00000293889 IBA57-AS1B1ANH7 110 aa11.96□□□□□ -0.5
CCDC78-201ENST00000293889 TMEM238C9JI98 176 aa11.95□□□□□ -0.5
CCDC78-201ENST00000293889 PRO1854Q9UHT4 67 aa11.95□□□□□ -0.5
CCDC78-201ENST00000293889 LINC00959A0A1B0GUT2 108 aa11.94□□□□□ -0.5
CCDC78-201ENST00000293889 M0QXV9 152 aa11.94□□□□□ -0.5
CCDC78-201ENST00000293889 CRPP02741 224 aa11.94□□□□□ -0.5
CCDC78-201ENST00000293889 IGHV1-58A0A0C4DH39 117 aa11.93□□□□□ -0.5
CCDC78-201ENST00000293889 APOMO95445 188 aa11.93□□□□□ -0.5
CCDC78-201ENST00000293889 SMCPP49901 116 aaPredicted RBP11.93□□□□□ -0.5
CCDC78-201ENST00000293889 ETDBQ3ZM63 59 aa11.93□□□□□ -0.5
CCDC78-201ENST00000293889 DNAH6Q9C0G6 4158 aa11.93□□□□□ -0.5
CCDC78-201ENST00000293889 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.93□□□□□ -0.5
CCDC78-201ENST00000293889 A0A0J9YXY3 114 aa11.93□□□□□ -0.5
CCDC78-201ENST00000293889 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
CCDC78-201ENST00000293889 IGLV10-54A0A075B6I4 117 aa11.92□□□□□ -0.5
CCDC78-201ENST00000293889 M0R2N4 97 aa11.92□□□□□ -0.5
CCDC78-201ENST00000293889 SCGB1A1P11684 91 aa11.92□□□□□ -0.5
CCDC78-201ENST00000293889 MIAQ16674 131 aa11.92□□□□□ -0.5
CCDC78-201ENST00000293889 LITAFQ99732 161 aa11.92□□□□□ -0.5
CCDC78-201ENST00000293889 Q9HAA7 133 aa11.92□□□□□ -0.5
CCDC78-201ENST00000293889 IGLV5-45A0A087WSX0 123 aa11.91□□□□□ -0.5
CCDC78-201ENST00000293889 A4D1N5 150 aa11.91□□□□□ -0.5
CCDC78-201ENST00000293889 SS18Q15532 418 aa11.91□□□□□ -0.5
CCDC78-201ENST00000293889 FAM19A3Q7Z5A8 133 aa11.91□□□□□ -0.5
CCDC78-201ENST00000293889 LINC01600Q96MT4 127 aa11.91□□□□□ -0.5
CCDC78-201ENST00000293889 SPANXDQ9BXN6 97 aa11.91□□□□□ -0.5
CCDC78-201ENST00000293889 SPANXCQ9NY87 97 aa11.91□□□□□ -0.5
CCDC78-201ENST00000293889 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.5
CCDC78-201ENST00000293889 LINC00242Q5T6M2 205 aa11.9□□□□□ -0.5
CCDC78-201ENST00000293889 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 EIF4EBP3O60516 100 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-201ENST00000293889 TIMM17BO60830 172 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 PSMB2P49721 201 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 MUSTN1Q8IVN3 82 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 CHCHD10Q8WYQ3 142 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-201ENST00000293889 LOC107984156A0A0G2JMH3 177 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 GAGE12HA6NDE8 117 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 TCL1BO95988 128 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 XCL1P47992 114 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 COX6A2Q02221 97 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 Q6ZR54 194 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 ARL17AQ8IVW1 177 aa11.89□□□□□ -0.51
CCDC78-201ENST00000293889 FOXI1Q12951 378 aa11.88□□□□□ -0.51
CCDC78-201ENST00000293889 IGKV2D-24A0A075B6R9 120 aa11.87□□□□□ -0.51
CCDC78-201ENST00000293889 SIGMAR1Q99720 223 aa11.87□□□□□ -0.51
CCDC78-201ENST00000293889 KRTAP26-1Q6PEX3 210 aa11.86□□□□□ -0.51
CCDC78-201ENST00000293889 C1orf43Q9BWL3 253 aa11.86□□□□□ -0.51
CCDC78-201ENST00000293889 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
CCDC78-201ENST00000293889 ERG28Q9UKR5 140 aa11.86□□□□□ -0.51
CCDC78-201ENST00000293889 TEN1Q86WV5 123 aa11.86□□□□□ -0.51
CCDC78-201ENST00000293889 HERVK_113P63121 156 aa11.85□□□□□ -0.51
CCDC78-201ENST00000293889 CD164L2Q6UWJ8 174 aa11.85□□□□□ -0.51
CCDC78-201ENST00000293889 RMI2Q96E14 147 aa11.85□□□□□ -0.51
CCDC78-201ENST00000293889 NDUFA12Q9UI09 145 aa11.85□□□□□ -0.51
CCDC78-201ENST00000293889 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
CCDC78-201ENST00000293889 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
CCDC78-201ENST00000293889 IFITM1P13164 125 aa11.84□□□□□ -0.51
CCDC78-201ENST00000293889 PPDPFLQ8WWR9 84 aa11.84□□□□□ -0.51
CCDC78-201ENST00000293889 IGHV3-64A0A075B6Q5 118 aa11.83□□□□□ -0.52
CCDC78-201ENST00000293889 C5orf38Q86SI9 138 aa11.82□□□□□ -0.52
CCDC78-201ENST00000293889 MTURNQ8N3F0 131 aa11.82□□□□□ -0.52
CCDC78-201ENST00000293889 CDKN2A-AS1Q9UH64 79 aa11.82□□□□□ -0.52
CCDC78-201ENST00000293889 IGLV5-39A0A0G2JS06 123 aa11.82□□□□□ -0.52
CCDC78-201ENST00000293889 DNAH10Q8IVF4 4471 aa11.81□□□□□ -0.52
CCDC78-201ENST00000293889 NDUFA1O15239 70 aa11.81□□□□□ -0.52
CCDC78-201ENST00000293889 SCGB1C2P0DMR2 95 aa11.81□□□□□ -0.52
CCDC78-201ENST00000293889 C6orf223Q8N319 242 aa11.81□□□□□ -0.52
CCDC78-201ENST00000293889 DNAH2Q9P225 4427 aa11.8□□□□□ -0.52
CCDC78-201ENST00000293889 COX7A2LO14548 114 aa11.8□□□□□ -0.52
CCDC78-201ENST00000293889 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
CCDC78-201ENST00000293889 CARD19Q96LW7 228 aa11.8□□□□□ -0.52
CCDC78-201ENST00000293889 PPDPFQ9H3Y8 114 aa11.8□□□□□ -0.52
CCDC78-201ENST00000293889 A0A087WZ39 114 aa11.79□□□□□ -0.52
CCDC78-201ENST00000293889 Q6ZRN7 208 aaPredicted RBP11.79□□□□□ -0.52
CCDC78-201ENST00000293889 SPINK8P0C7L1 97 aa11.78□□□□□ -0.52
CCDC78-201ENST00000293889 SFTA2Q6UW10 78 aa11.78□□□□□ -0.52
CCDC78-201ENST00000293889 ATXN8Q156A1 80 aa11.78□□□□□ -0.52
CCDC78-201ENST00000293889 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
CCDC78-201ENST00000293889 PSCAO43653 123 aa11.77□□□□□ -0.53
CCDC78-201ENST00000293889 CDIP1Q9H305 208 aa11.77□□□□□ -0.53
CCDC78-201ENST00000293889 SLC25A20O43772 301 aa11.76□□□□□ -0.53
CCDC78-201ENST00000293889 MALP21145 153 aa11.76□□□□□ -0.53
CCDC78-201ENST00000293889 FRAS1Q86XX4 4008 aa11.76□□□□□ -0.53
CCDC78-201ENST00000293889 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
CCDC78-201ENST00000293889 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
CCDC78-201ENST00000293889 LINC01561Q8N1V8 128 aa11.75□□□□□ -0.53
CCDC78-201ENST00000293889 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
CCDC78-201ENST00000293889 RTL8CO15255 209 aa11.73□□□□□ -0.53
CCDC78-201ENST00000293889 TRIAP1O43715 76 aa11.73□□□□□ -0.53
CCDC78-201ENST00000293889 CIRBPQ14011 172 aaKnown RBP11.73□□□□□ -0.53
CCDC78-201ENST00000293889 TRBV10-2A0A0K0K1G8 114 aa11.72□□□□□ -0.53
CCDC78-201ENST00000293889 LECT2O14960 151 aa11.72□□□□□ -0.53
CCDC78-201ENST00000293889 PRSS2P07478 247 aa11.72□□□□□ -0.53
CCDC78-201ENST00000293889 C15orf56Q8N910 161 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms