RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TRBV6-5A0A0K0K1A5 114 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 H3BNG1 76 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 Q0VG73 95 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 TRBV10-1A0A0K0K1A3 114 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 LINC01546A6NGU7 62 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 Q6ZUT4 128 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 BAALCQ8WXS3 180 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 CELA1Q9UNI1 258 aa5.95□□□□□ -1.46
PTPDC1-201ENST00000288976 TRAV13-2A0A0B4J235 113 aa5.94□□□□□ -1.46
PTPDC1-201ENST00000288976 SYCNQ0VAF6 134 aa5.94□□□□□ -1.46
PTPDC1-201ENST00000288976 M0QY20 66 aa5.94□□□□□ -1.46
PTPDC1-201ENST00000288976 FHL2Q14192 279 aa5.94□□□□□ -1.46
PTPDC1-201ENST00000288976 LINC00694P0DN24 101 aa5.93□□□□□ -1.46
PTPDC1-201ENST00000288976 UBE2D3P61077 147 aa5.93□□□□□ -1.46
PTPDC1-201ENST00000288976 NRACQ8N912 160 aa5.93□□□□□ -1.46
PTPDC1-201ENST00000288976 C12orf74Q32Q52 190 aa5.93□□□□□ -1.46
PTPDC1-201ENST00000288976 RBX1P62877 108 aa5.92□□□□□ -1.46
PTPDC1-201ENST00000288976 CARD19Q96LW7 228 aa5.92□□□□□ -1.46
PTPDC1-201ENST00000288976 PRKDCP78527 4128 aaKnown RBP5.92□□□□□ -1.46
PTPDC1-201ENST00000288976 NFE4Q86UQ8 179 aa5.92□□□□□ -1.46
PTPDC1-201ENST00000288976 K7ERJ3 54 aa5.91□□□□□ -1.46
PTPDC1-201ENST00000288976 ETDBQ3ZM63 59 aa5.91□□□□□ -1.46
PTPDC1-201ENST00000288976 PRO1854Q9UHT4 67 aa5.91□□□□□ -1.46
PTPDC1-201ENST00000288976 IGKV2D-26A0A0A0MRZ7 120 aa5.91□□□□□ -1.46
PTPDC1-201ENST00000288976 RPL37AP8A6NKH3 93 aa5.91□□□□□ -1.46
PTPDC1-201ENST00000288976 PCP2Q8IVA1 136 aa5.91□□□□□ -1.46
PTPDC1-201ENST00000288976 ODF1Q14990 250 aa5.9□□□□□ -1.46
PTPDC1-201ENST00000288976 COA6Q5JTJ3 125 aaKnown RBP5.9□□□□□ -1.46
PTPDC1-201ENST00000288976 C1orf134Q5TEV5 83 aa5.9□□□□□ -1.46
PTPDC1-201ENST00000288976 UBE2V1Q13404 147 aa5.9□□□□□ -1.46
PTPDC1-201ENST00000288976 NEXN-AS1Q8NBZ9 246 aa5.9□□□□□ -1.46
PTPDC1-201ENST00000288976 IGLV5-52A0A0A0MRZ9 124 aa5.9□□□□□ -1.47
PTPDC1-201ENST00000288976 Q6ZVH6 145 aa5.9□□□□□ -1.47
PTPDC1-201ENST00000288976 DIRC1Q969H9 104 aa5.9□□□□□ -1.47
PTPDC1-201ENST00000288976 Q6ZSN1 163 aa5.9□□□□□ -1.47
PTPDC1-201ENST00000288976 TRBV27A0A0K0K1C4 114 aa5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 TRBV6-8A0A0A6YYG3 113 aa5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 IGLV9-49A0A0B4J1Y8 123 aa5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 POLR2KP53803 58 aaKnown RBP5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 UBE2D2P62837 147 aa5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 C14orf132Q9NPU4 83 aa5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 LINC00173Q6ZV60 143 aa5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 C20orf203Q8NBC4 194 aa5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 CDKN2A-AS1Q9UH64 79 aa5.89□□□□□ -1.47
PTPDC1-201ENST00000288976 A4D1N5 150 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 NUPR1O60356 82 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 NREPQ16612 68 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 ANKRD29Q8N6D5 301 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 H3BMG7 143 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 INAFM2P0DMQ5 153 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 HERV-K104P63124 156 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 BAALC-AS2P0C853 105 aa5.88□□□□□ -1.47
PTPDC1-201ENST00000288976 C11orf86A6NJI1 115 aa5.87□□□□□ -1.47
PTPDC1-201ENST00000288976 MRPL52Q86TS9 123 aaKnown RBP5.87□□□□□ -1.47
PTPDC1-201ENST00000288976 IGHV1-58A0A0C4DH39 117 aa5.87□□□□□ -1.47
PTPDC1-201ENST00000288976 H7C423 109 aa5.87□□□□□ -1.47
PTPDC1-201ENST00000288976 ORMDL1Q9P0S3 153 aa5.87□□□□□ -1.47
PTPDC1-201ENST00000288976 BVES-AS1Q5T3Y7 98 aa5.87□□□□□ -1.47
PTPDC1-201ENST00000288976 GAS8-AS1O95177 125 aa5.86□□□□□ -1.47
PTPDC1-201ENST00000288976 MUSTN1Q8IVN3 82 aa5.86□□□□□ -1.47
PTPDC1-201ENST00000288976 TENM3Q9P273 2699 aa5.86□□□□□ -1.47
PTPDC1-201ENST00000288976 MIAQ16674 131 aa5.86□□□□□ -1.47
PTPDC1-201ENST00000288976 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
PTPDC1-201ENST00000288976 COX6A2Q02221 97 aa5.86□□□□□ -1.47
PTPDC1-201ENST00000288976 DNAH6Q9C0G6 4158 aa5.86□□□□□ -1.47
PTPDC1-201ENST00000288976 IGLC3P0DOY3 106 aa5.85□□□□□ -1.47
PTPDC1-201ENST00000288976 MEGF8Q7Z7M0 2845 aa5.85□□□□□ -1.47
PTPDC1-201ENST00000288976 NTN5Q8WTR8 489 aaPredicted RBP5.85□□□□□ -1.47
PTPDC1-201ENST00000288976 TSHBP01222 138 aa5.85□□□□□ -1.47
PTPDC1-201ENST00000288976 CXCL5P42830 114 aa5.85□□□□□ -1.47
PTPDC1-201ENST00000288976 LGALS9CQ6DKI2 356 aa5.85□□□□□ -1.47
PTPDC1-201ENST00000288976 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
PTPDC1-201ENST00000288976 URB1-AS1Q96HZ7 61 aa5.85□□□□□ -1.47
PTPDC1-201ENST00000288976 CFC1BP0CG36 223 aa5.84□□□□□ -1.47
PTPDC1-201ENST00000288976 CFC1P0CG37 223 aa5.84□□□□□ -1.47
PTPDC1-201ENST00000288976 NBEAL2Q6ZNJ1 2754 aa5.84□□□□□ -1.47
PTPDC1-201ENST00000288976 COX7BP24311 80 aa5.84□□□□□ -1.47
PTPDC1-201ENST00000288976 ANAPC13Q9BS18 74 aa5.84□□□□□ -1.47
PTPDC1-201ENST00000288976 LELP1Q5T871 98 aa5.83□□□□□ -1.48
PTPDC1-201ENST00000288976 CIRBP-AS1Q8TBR5 109 aa5.83□□□□□ -1.48
PTPDC1-201ENST00000288976 XGP55808 180 aa5.83□□□□□ -1.48
PTPDC1-201ENST00000288976 LINC00310P59036 64 aa5.83□□□□□ -1.48
PTPDC1-201ENST00000288976 C6orf223Q8N319 242 aa5.83□□□□□ -1.48
PTPDC1-201ENST00000288976 TOMM6Q96B49 74 aa5.83□□□□□ -1.48
PTPDC1-201ENST00000288976 C5orf47Q569G3 176 aa5.83□□□□□ -1.48
PTPDC1-201ENST00000288976 A0A1B0GX51 115 aa5.82□□□□□ -1.48
PTPDC1-201ENST00000288976 C16orf90A8MZG2 172 aa5.82□□□□□ -1.48
PTPDC1-201ENST00000288976 ANKRD39Q53RE8 183 aa5.82□□□□□ -1.48
PTPDC1-201ENST00000288976 LINC01556Q5JQF7 62 aa5.82□□□□□ -1.48
PTPDC1-201ENST00000288976 CHCHD7Q9BUK0 85 aa5.82□□□□□ -1.48
PTPDC1-201ENST00000288976 IGKV3D-7A0A0C4DH55 119 aa5.82□□□□□ -1.48
PTPDC1-201ENST00000288976 J3QL48 77 aa5.81□□□□□ -1.48
PTPDC1-201ENST00000288976 PYGO1Q9Y3Y4 419 aa5.81□□□□□ -1.48
PTPDC1-201ENST00000288976 WFDC10BQ8IUB3 73 aa5.81□□□□□ -1.48
PTPDC1-201ENST00000288976 WWC2-AS2Q96NR7 200 aa5.81□□□□□ -1.48
PTPDC1-201ENST00000288976 CSDC2Q9Y534 153 aaKnown RBP5.81□□□□□ -1.48
PTPDC1-201ENST00000288976 LINC01620Q4KN68 170 aa5.81□□□□□ -1.48
PTPDC1-201ENST00000288976 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
PTPDC1-201ENST00000288976 MUC7Q8TAX7 377 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms