RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 A0A096LNI7 61 aa9.14□□□□□ -0.95
SLC6A1-201ENST00000287766 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
SLC6A1-201ENST00000287766 APOC4P55056 127 aa9.14□□□□□ -0.95
SLC6A1-201ENST00000287766 NDUFC1O43677 76 aa9.13□□□□□ -0.95
SLC6A1-201ENST00000287766 ASPMQ8IZT6 3477 aa9.13□□□□□ -0.95
SLC6A1-201ENST00000287766 A6NED7 52 aa9.13□□□□□ -0.95
SLC6A1-201ENST00000287766 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
SLC6A1-201ENST00000287766 Q6JHZ5 121 aa9.12□□□□□ -0.95
SLC6A1-201ENST00000287766 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
SLC6A1-201ENST00000287766 DEFB135Q30KP9 77 aa9.12□□□□□ -0.95
SLC6A1-201ENST00000287766 A0A0J9YWU9 116 aa9.11□□□□□ -0.95
SLC6A1-201ENST00000287766 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
SLC6A1-201ENST00000287766 ADAMTSL4-AS1Q5T5F5 129 aa9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 CELA1Q9UNI1 258 aa9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 HECTD1Q9ULT8 2610 aa9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 IGKV4-1P06312 121 aa9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 MIFP14174 115 aa9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 WFDC10BQ8IUB3 73 aa9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 J3QKU1 62 aa9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 NANOS2P60321 138 aaKnown RBP9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 Q6ZSN1 163 aa9.1□□□□□ -0.95
SLC6A1-201ENST00000287766 SMCPP49901 116 aaPredicted RBP9.09□□□□□ -0.95
SLC6A1-201ENST00000287766 Q9UF83 564 aa9.09□□□□□ -0.95
SLC6A1-201ENST00000287766 PRO0255Q9UI72 69 aa9.09□□□□□ -0.95
SLC6A1-201ENST00000287766 FLNBO75369 2602 aaKnown RBP9.09□□□□□ -0.95
SLC6A1-201ENST00000287766 HIGD2AQ9BW72 106 aa9.09□□□□□ -0.95
SLC6A1-201ENST00000287766 SERP1Q9Y6X1 66 aa9.09□□□□□ -0.95
SLC6A1-201ENST00000287766 SPART-AS1P0CW21 52 aa9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 KIF25-AS1Q9Y6Z4 181 aa9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 FAM222AQ5U5X8 452 aa9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 CHCHD10Q8WYQ3 142 aaPredicted RBP9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 UBE2D4Q9Y2X8 147 aa9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 CCL18P55774 89 aa9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 WFDC13Q8IUB5 93 aa9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 RETNQ9HD89 108 aa9.08□□□□□ -0.96
SLC6A1-201ENST00000287766 COL12A1Q99715 3063 aa9.07□□□□□ -0.96
SLC6A1-201ENST00000287766 REG3AQ06141 175 aa9.07□□□□□ -0.96
SLC6A1-201ENST00000287766 FAM19A1Q7Z5A9 133 aa9.07□□□□□ -0.96
SLC6A1-201ENST00000287766 ATP5EP56381 51 aaPredicted RBP9.07□□□□□ -0.96
SLC6A1-201ENST00000287766 RMI2Q96E14 147 aa9.07□□□□□ -0.96
SLC6A1-201ENST00000287766 DCHS1Q96JQ0 3298 aa9.07□□□□□ -0.96
SLC6A1-201ENST00000287766 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
SLC6A1-201ENST00000287766 ZNF843Q8N446 348 aa9.06□□□□□ -0.96
SLC6A1-201ENST00000287766 LINC00482Q8N8I6 264 aa9.06□□□□□ -0.96
SLC6A1-201ENST00000287766 TRAV7A0A075B6U4 112 aa9.06□□□□□ -0.96
SLC6A1-201ENST00000287766 LINC00315P59091 139 aa9.06□□□□□ -0.96
SLC6A1-201ENST00000287766 NTM-AS1Q6ZSK4 140 aa9.05□□□□□ -0.96
SLC6A1-201ENST00000287766 PSPHP1O15172 72 aa9.05□□□□□ -0.96
SLC6A1-201ENST00000287766 FLNAP21333 2647 aaKnown RBP9.05□□□□□ -0.96
SLC6A1-201ENST00000287766 PLA2G2AP14555 144 aa9.04□□□□□ -0.96
SLC6A1-201ENST00000287766 DMDP11532 3685 aa9.04□□□□□ -0.96
SLC6A1-201ENST00000287766 LINC00846Q9NV44 126 aa9.04□□□□□ -0.96
SLC6A1-201ENST00000287766 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
SLC6A1-201ENST00000287766 HILS1P60008 231 aa9.04□□□□□ -0.96
SLC6A1-201ENST00000287766 Q8N3U1 123 aa9.04□□□□□ -0.96
SLC6A1-201ENST00000287766 LINC00242Q5T6M2 205 aa9.03□□□□□ -0.96
SLC6A1-201ENST00000287766 PRO0461Q9UI25 63 aa9.03□□□□□ -0.96
SLC6A1-201ENST00000287766 CFAP46Q8IYW2 2715 aa9.03□□□□□ -0.96
SLC6A1-201ENST00000287766 TRBV6-8A0A0A6YYG3 113 aa9.03□□□□□ -0.96
SLC6A1-201ENST00000287766 LINC01006Q8NI28 216 aa9.03□□□□□ -0.96
SLC6A1-201ENST00000287766 IGKV2-24A0A0C4DH68 120 aa9.03□□□□□ -0.96
SLC6A1-201ENST00000287766 COX6A2Q02221 97 aa9.03□□□□□ -0.96
SLC6A1-201ENST00000287766 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
SLC6A1-201ENST00000287766 A0A087WYN8 130 aa9.02□□□□□ -0.97
SLC6A1-201ENST00000287766 UBE2AP49459 152 aa9.02□□□□□ -0.97
SLC6A1-201ENST00000287766 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
SLC6A1-201ENST00000287766 CHCHD7Q9BUK0 85 aa9.01□□□□□ -0.97
SLC6A1-201ENST00000287766 KIR2DL5BQ8NHK3 375 aa9.01□□□□□ -0.97
SLC6A1-201ENST00000287766 SMR3AQ99954 134 aa9.01□□□□□ -0.97
SLC6A1-201ENST00000287766 IGKV2-28A0A075B6P5 120 aa9.01□□□□□ -0.97
SLC6A1-201ENST00000287766 IGKV2D-28P01615 120 aa9.01□□□□□ -0.97
SLC6A1-201ENST00000287766 BBC3Q96PG8 261 aaPredicted RBP9□□□□□ -0.97
SLC6A1-201ENST00000287766 ITPR3Q14573 2671 aa9□□□□□ -0.97
SLC6A1-201ENST00000287766 LINC01546A6NGU7 62 aa9□□□□□ -0.97
SLC6A1-201ENST00000287766 USP24Q9UPU5 2620 aa8.99□□□□□ -0.97
SLC6A1-201ENST00000287766 TRBV7-7A0A0K0K1E9 115 aa8.99□□□□□ -0.97
SLC6A1-201ENST00000287766 PRO0628Q9UI54 55 aa8.99□□□□□ -0.97
SLC6A1-201ENST00000287766 FLNCQ14315 2725 aa8.99□□□□□ -0.97
SLC6A1-201ENST00000287766 RPL28P46779 137 aaKnown RBP8.99□□□□□ -0.97
SLC6A1-201ENST00000287766 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
SLC6A1-201ENST00000287766 SMIM1B2RUZ4 78 aa8.98□□□□□ -0.97
SLC6A1-201ENST00000287766 CHD6Q8TD26 2715 aa8.98□□□□□ -0.97
SLC6A1-201ENST00000287766 CDC42SE2Q9NRR3 84 aa8.97□□□□□ -0.97
SLC6A1-201ENST00000287766 BRI3O95415 125 aa8.96□□□□□ -0.97
SLC6A1-201ENST00000287766 ZFHX4Q86UP3 3567 aa8.96□□□□□ -0.97
SLC6A1-201ENST00000287766 LINC00959A0A1B0GUT2 108 aa8.96□□□□□ -0.98
SLC6A1-201ENST00000287766 SEC61GP60059 68 aa8.96□□□□□ -0.98
SLC6A1-201ENST00000287766 AMELXQ99217 191 aa8.96□□□□□ -0.98
SLC6A1-201ENST00000287766 C9orf66Q5T8R8 295 aa8.96□□□□□ -0.98
SLC6A1-201ENST00000287766 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
SLC6A1-201ENST00000287766 Q8N814 137 aa8.95□□□□□ -0.98
SLC6A1-201ENST00000287766 LINC00208Q96KT6 92 aa8.95□□□□□ -0.98
SLC6A1-201ENST00000287766 LAMA5O15230 3695 aa8.95□□□□□ -0.98
SLC6A1-201ENST00000287766 TRBV7-6A0A0J9YX20 115 aa8.95□□□□□ -0.98
SLC6A1-201ENST00000287766 TRBV6-4A0A1B0GX49 114 aa8.95□□□□□ -0.98
SLC6A1-201ENST00000287766 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
SLC6A1-201ENST00000287766 PRR15LQ9BU68 103 aa8.94□□□□□ -0.98
SLC6A1-201ENST00000287766 INAFM1C9JVW0 142 aa8.94□□□□□ -0.98
SLC6A1-201ENST00000287766 TMEM254Q8TBM7 123 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms