RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 KRTAP24-1Q3LI83 254 aa12.83□□□□□ -0.35
PDLIM3-201ENST00000284767 OVOL2Q9BRP0 275 aa12.83□□□□□ -0.35
PDLIM3-201ENST00000284767 DEFB130BP0DP73 79 aa12.83□□□□□ -0.36
PDLIM3-201ENST00000284767 DEFB130AP0DP74 79 aa12.83□□□□□ -0.36
PDLIM3-201ENST00000284767 UBE2L6O14933 153 aa12.82□□□□□ -0.36
PDLIM3-201ENST00000284767 CRPP02741 224 aa12.82□□□□□ -0.36
PDLIM3-201ENST00000284767 CXCL5P42830 114 aa12.82□□□□□ -0.36
PDLIM3-201ENST00000284767 X6R8D5 127 aa12.82□□□□□ -0.36
PDLIM3-201ENST00000284767 MAST4O15021 2626 aa12.82□□□□□ -0.36
PDLIM3-201ENST00000284767 ATP5G1P05496 136 aa12.82□□□□□ -0.36
PDLIM3-201ENST00000284767 DEFB135Q30KP9 77 aa12.82□□□□□ -0.36
PDLIM3-201ENST00000284767 TMEM243Q9BU79 118 aa12.82□□□□□ -0.36
PDLIM3-201ENST00000284767 DEFB4AO15263 64 aa12.81□□□□□ -0.36
PDLIM3-201ENST00000284767 SMIM20Q8N5G0 67 aa12.81□□□□□ -0.36
PDLIM3-201ENST00000284767 MALP21145 153 aa12.8□□□□□ -0.36
PDLIM3-201ENST00000284767 COX7B2Q8TF08 81 aa12.8□□□□□ -0.36
PDLIM3-201ENST00000284767 TRGV4A0A0C4DH28 118 aa12.79□□□□□ -0.36
PDLIM3-201ENST00000284767 WFDC9Q8NEX5 89 aa12.79□□□□□ -0.36
PDLIM3-201ENST00000284767 C5orf38Q86SI9 138 aa12.78□□□□□ -0.36
PDLIM3-201ENST00000284767 OXLD1Q5BKU9 147 aa12.78□□□□□ -0.36
PDLIM3-201ENST00000284767 MIR7-3HGQ8N6C7 128 aa12.78□□□□□ -0.36
PDLIM3-201ENST00000284767 SND1-IT1Q9HBX3 110 aa12.78□□□□□ -0.36
PDLIM3-201ENST00000284767 FHL2Q14192 279 aa12.77□□□□□ -0.36
PDLIM3-201ENST00000284767 LINC00337Q8N6G1 96 aa12.77□□□□□ -0.36
PDLIM3-201ENST00000284767 Q9HAA7 133 aa12.77□□□□□ -0.37
PDLIM3-201ENST00000284767 IGKV2-28A0A075B6P5 120 aa12.76□□□□□ -0.37
PDLIM3-201ENST00000284767 IGKV2D-28P01615 120 aa12.76□□□□□ -0.37
PDLIM3-201ENST00000284767 GAGE2AQ6NT46 116 aa12.76□□□□□ -0.37
PDLIM3-201ENST00000284767 C3orf22Q8N5N4 141 aa12.76□□□□□ -0.37
PDLIM3-201ENST00000284767 UQCRQO14949 82 aa12.75□□□□□ -0.37
PDLIM3-201ENST00000284767 DNAL4O96015 105 aa12.75□□□□□ -0.37
PDLIM3-201ENST00000284767 H0YGX0 51 aa12.75□□□□□ -0.37
PDLIM3-201ENST00000284767 ANK2Q01484 3957 aa12.74□□□□□ -0.37
PDLIM3-201ENST00000284767 TRBV6-4A0A1B0GX49 114 aa12.74□□□□□ -0.37
PDLIM3-201ENST00000284767 COL6A5A8TX70 2615 aa12.73□□□□□ -0.37
PDLIM3-201ENST00000284767 IGHV4-30-4P0DP06 118 aa12.73□□□□□ -0.37
PDLIM3-201ENST00000284767 C9orf153Q5TBE3 101 aa12.73□□□□□ -0.37
PDLIM3-201ENST00000284767 SMIM11BQ8TCY0 68 aa12.73□□□□□ -0.37
PDLIM3-201ENST00000284767 CMYA5Q8N3K9 4069 aa12.72□□□□□ -0.37
PDLIM3-201ENST00000284767 LINC00158P58513 81 aa12.72□□□□□ -0.37
PDLIM3-201ENST00000284767 LINC00526Q96FQ7 95 aa12.72□□□□□ -0.37
PDLIM3-201ENST00000284767 TOMM7Q9P0U1 55 aa12.72□□□□□ -0.37
PDLIM3-201ENST00000284767 IBA57-AS1B1ANH7 110 aa12.72□□□□□ -0.37
PDLIM3-201ENST00000284767 A0A087WYN8 130 aa12.71□□□□□ -0.37
PDLIM3-201ENST00000284767 KIR2DL5BQ8NHK3 375 aa12.71□□□□□ -0.37
PDLIM3-201ENST00000284767 CCL18P55774 89 aa12.71□□□□□ -0.38
PDLIM3-201ENST00000284767 LINC00612Q8N6U2 182 aa12.7□□□□□ -0.38
PDLIM3-201ENST00000284767 C3orf56Q8N813 242 aa12.7□□□□□ -0.38
PDLIM3-201ENST00000284767 OBSCN-AS1Q96MR7 158 aa12.7□□□□□ -0.38
PDLIM3-201ENST00000284767 IGHV3OR16-9A0A0B4J2B5 98 aa12.7□□□□□ -0.38
PDLIM3-201ENST00000284767 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
PDLIM3-201ENST00000284767 APOC4P55056 127 aa12.7□□□□□ -0.38
PDLIM3-201ENST00000284767 KRTAP10-11P60412 298 aa12.7□□□□□ -0.38
PDLIM3-201ENST00000284767 HIST1H4AP62805 103 aaKnown RBP12.7□□□□□ -0.38
PDLIM3-201ENST00000284767 WIPF1O43516 503 aa12.69□□□□□ -0.38
PDLIM3-201ENST00000284767 A0A096LPF7 62 aa12.68□□□□□ -0.38
PDLIM3-201ENST00000284767 SMIM9A6NGZ8 99 aa12.68□□□□□ -0.38
PDLIM3-201ENST00000284767 A0A087WZ39 114 aa12.68□□□□□ -0.38
PDLIM3-201ENST00000284767 CELA1Q9UNI1 258 aa12.68□□□□□ -0.38
PDLIM3-201ENST00000284767 COX7CP15954 63 aa12.67□□□□□ -0.38
PDLIM3-201ENST00000284767 ATOX1O00244 68 aa12.67□□□□□ -0.38
PDLIM3-201ENST00000284767 TRBV6-8A0A0A6YYG3 113 aa12.66□□□□□ -0.38
PDLIM3-201ENST00000284767 IGKV3OR2-268A0A0C4DH90 116 aa12.66□□□□□ -0.38
PDLIM3-201ENST00000284767 GYPEP15421 78 aa12.66□□□□□ -0.38
PDLIM3-201ENST00000284767 KLK5Q9Y337 293 aaPredicted RBP12.66□□□□□ -0.38
PDLIM3-201ENST00000284767 NOTCH1P46531 2555 aa12.66□□□□□ -0.38
PDLIM3-201ENST00000284767 IGLV4-60A0A075B6I1 120 aa12.66□□□□□ -0.38
PDLIM3-201ENST00000284767 C14orf132Q9NPU4 83 aa12.66□□□□□ -0.38
PDLIM3-201ENST00000284767 Q8NAQ8 132 aa12.65□□□□□ -0.39
PDLIM3-201ENST00000284767 C9orf129Q5T035 196 aaKnown RBP12.64□□□□□ -0.39
PDLIM3-201ENST00000284767 Q6JHZ5 121 aa12.64□□□□□ -0.39
PDLIM3-201ENST00000284767 LECT2O14960 151 aa12.64□□□□□ -0.39
PDLIM3-201ENST00000284767 C2orf48Q96LS8 159 aa12.63□□□□□ -0.39
PDLIM3-201ENST00000284767 PAX4O43316 350 aa12.63□□□□□ -0.39
PDLIM3-201ENST00000284767 PFN2P35080 140 aa12.63□□□□□ -0.39
PDLIM3-201ENST00000284767 RETNQ9HD89 108 aa12.62□□□□□ -0.39
PDLIM3-201ENST00000284767 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
PDLIM3-201ENST00000284767 CRYGAP11844 174 aa12.62□□□□□ -0.39
PDLIM3-201ENST00000284767 PRO0255Q9UI72 69 aa12.61□□□□□ -0.39
PDLIM3-201ENST00000284767 DAD1P61803 113 aa12.6□□□□□ -0.39
PDLIM3-201ENST00000284767 RPL18AQ02543 176 aaKnown RBP12.6□□□□□ -0.39
PDLIM3-201ENST00000284767 OR13C6PQ8NH95 151 aa12.6□□□□□ -0.39
PDLIM3-201ENST00000284767 LINC00846Q9NV44 126 aa12.6□□□□□ -0.39
PDLIM3-201ENST00000284767 TENM3Q9P273 2699 aa12.59□□□□□ -0.39
PDLIM3-201ENST00000284767 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
PDLIM3-201ENST00000284767 HTN3P15516 51 aa12.59□□□□□ -0.39
PDLIM3-201ENST00000284767 ORMDL1Q9P0S3 153 aa12.59□□□□□ -0.39
PDLIM3-201ENST00000284767 MIFP14174 115 aa12.59□□□□□ -0.39
PDLIM3-201ENST00000284767 C6orf226Q5I0X4 101 aa12.58□□□□□ -0.4
PDLIM3-201ENST00000284767 NCR3O14931 201 aa12.57□□□□□ -0.4
PDLIM3-201ENST00000284767 IGKV3D-7A0A0C4DH55 119 aa12.56□□□□□ -0.4
PDLIM3-201ENST00000284767 A0A1B0GX51 115 aa12.56□□□□□ -0.4
PDLIM3-201ENST00000284767 LINC00167Q96N53 147 aa12.56□□□□□ -0.4
PDLIM3-201ENST00000284767 Q8IZM0 81 aa12.55□□□□□ -0.4
PDLIM3-201ENST00000284767 NBEAL1Q6ZS30 2694 aa12.55□□□□□ -0.4
PDLIM3-201ENST00000284767 SLPIP03973 132 aa12.54□□□□□ -0.4
PDLIM3-201ENST00000284767 LINC01561Q8N1V8 128 aa12.54□□□□□ -0.4
PDLIM3-201ENST00000284767 SPART-AS1P0CW21 52 aa12.54□□□□□ -0.4
PDLIM3-201ENST00000284767 EGFEM1PQ0D2K5 195 aa12.54□□□□□ -0.4
PDLIM3-201ENST00000284767 SS18Q15532 418 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms