RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 LOC107984156A0A0G2JMH3 177 aa14.24□□□□□ -0.13
YBX3-202ENST00000279550 ARL17AQ8IVW1 177 aa14.24□□□□□ -0.13
YBX3-202ENST00000279550 H7C2G1 150 aa14.23□□□□□ -0.13
YBX3-202ENST00000279550 CD164L2Q6UWJ8 174 aa14.22□□□□□ -0.13
YBX3-202ENST00000279550 ERG28Q9UKR5 140 aa14.22□□□□□ -0.13
YBX3-202ENST00000279550 FBN3Q75N90 2809 aa14.21□□□□□ -0.13
YBX3-202ENST00000279550 H3BMG7 143 aa14.21□□□□□ -0.13
YBX3-202ENST00000279550 LINC01561Q8N1V8 128 aa14.21□□□□□ -0.13
YBX3-202ENST00000279550 C15orf53Q8NAA6 179 aa14.21□□□□□ -0.14
YBX3-202ENST00000279550 KLK12Q9UKR0 248 aa14.21□□□□□ -0.14
YBX3-202ENST00000279550 WFDC10BQ8IUB3 73 aa14.2□□□□□ -0.14
YBX3-202ENST00000279550 COX7A2LO14548 114 aa14.19□□□□□ -0.14
YBX3-202ENST00000279550 FOXI1Q12951 378 aa14.19□□□□□ -0.14
YBX3-202ENST00000279550 PRR34Q9NV39 138 aa14.18□□□□□ -0.14
YBX3-202ENST00000279550 PSMB2P49721 201 aa14.18□□□□□ -0.14
YBX3-202ENST00000279550 ESRGQ1W209 222 aa14.18□□□□□ -0.14
YBX3-202ENST00000279550 ENHOQ6UWT2 76 aa14.18□□□□□ -0.14
YBX3-202ENST00000279550 C6orf226Q5I0X4 101 aa14.17□□□□□ -0.14
YBX3-202ENST00000279550 Q8IZM0 81 aa14.17□□□□□ -0.14
YBX3-202ENST00000279550 GAGE12HA6NDE8 117 aa14.16□□□□□ -0.14
YBX3-202ENST00000279550 KIAA0087Q14695 138 aa14.16□□□□□ -0.14
YBX3-202ENST00000279550 Q1RN00 199 aa14.16□□□□□ -0.14
YBX3-202ENST00000279550 C2orf82Q6UX34 121 aa14.16□□□□□ -0.14
YBX3-202ENST00000279550 MTURNQ8N3F0 131 aa14.16□□□□□ -0.14
YBX3-202ENST00000279550 MIR7-3HGQ8N6C7 128 aa14.16□□□□□ -0.14
YBX3-202ENST00000279550 TCL1BO95988 128 aa14.15□□□□□ -0.14
YBX3-202ENST00000279550 PRO0461Q9UI25 63 aa14.15□□□□□ -0.14
YBX3-202ENST00000279550 IBA57-AS1B1ANH7 110 aa14.14□□□□□ -0.15
YBX3-202ENST00000279550 RPL13AP40429 203 aaKnown RBP14.14□□□□□ -0.15
YBX3-202ENST00000279550 LINC00158P58513 81 aa14.14□□□□□ -0.15
YBX3-202ENST00000279550 LYRM7Q5U5X0 104 aa14.14□□□□□ -0.15
YBX3-202ENST00000279550 WFDC2Q14508 124 aa14.13□□□□□ -0.15
YBX3-202ENST00000279550 TRIAP1O43715 76 aa14.12□□□□□ -0.15
YBX3-202ENST00000279550 SCGB1C2P0DMR2 95 aa14.12□□□□□ -0.15
YBX3-202ENST00000279550 MALP21145 153 aa14.12□□□□□ -0.15
YBX3-202ENST00000279550 PFN2P35080 140 aa14.12□□□□□ -0.15
YBX3-202ENST00000279550 COPS9Q8WXC6 57 aa14.12□□□□□ -0.15
YBX3-202ENST00000279550 UBE2WQ96B02 151 aa14.12□□□□□ -0.15
YBX3-202ENST00000279550 PPDPFQ9H3Y8 114 aa14.12□□□□□ -0.15
YBX3-202ENST00000279550 NUPR2A6NF83 97 aa14.11□□□□□ -0.15
YBX3-202ENST00000279550 OCIAD2Q56VL3 154 aa14.1□□□□□ -0.15
YBX3-202ENST00000279550 TRBV30A0A0K0K1B3 111 aa14.1□□□□□ -0.15
YBX3-202ENST00000279550 F8W1H4 67 aa14.1□□□□□ -0.15
YBX3-202ENST00000279550 TRBV20-1A0A075B6N2 111 aa14.08□□□□□ -0.16
YBX3-202ENST00000279550 SMCPP49901 116 aaPredicted RBP14.08□□□□□ -0.16
YBX3-202ENST00000279550 CCL18P55774 89 aa14.08□□□□□ -0.16
YBX3-202ENST00000279550 CFAP161Q6P656 301 aa14.08□□□□□ -0.16
YBX3-202ENST00000279550 CRPP02741 224 aa14.07□□□□□ -0.16
YBX3-202ENST00000279550 CKS1BP61024 79 aa14.07□□□□□ -0.16
YBX3-202ENST00000279550 KLK5Q9Y337 293 aaPredicted RBP14.07□□□□□ -0.16
YBX3-202ENST00000279550 C6orf223Q8N319 242 aa14.06□□□□□ -0.16
YBX3-202ENST00000279550 APLNQ9ULZ1 77 aa14.06□□□□□ -0.16
YBX3-202ENST00000279550 CSMD3Q7Z407 3707 aa14.05□□□□□ -0.16
YBX3-202ENST00000279550 KRTAP26-1Q6PEX3 210 aa14.05□□□□□ -0.16
YBX3-202ENST00000279550 SND1-IT1Q9HBX3 110 aa14.05□□□□□ -0.16
YBX3-202ENST00000279550 LINC00588Q9Y4M8 146 aa14.05□□□□□ -0.16
YBX3-202ENST00000279550 SPAG11BQ08648 103 aa14.04□□□□□ -0.16
YBX3-202ENST00000279550 LINC00526Q96FQ7 95 aa14.04□□□□□ -0.16
YBX3-202ENST00000279550 DNAH7Q8WXX0 4024 aa14.04□□□□□ -0.16
YBX3-202ENST00000279550 IGKV2-28A0A075B6P5 120 aa14.04□□□□□ -0.16
YBX3-202ENST00000279550 TRAV8-4A0A0B4J246 113 aa14.04□□□□□ -0.16
YBX3-202ENST00000279550 IGKV2D-28P01615 120 aa14.04□□□□□ -0.16
YBX3-202ENST00000279550 CXCL5P42830 114 aa14.04□□□□□ -0.16
YBX3-202ENST00000279550 C9orf116Q5BN46 136 aaPredicted RBP14.03□□□□□ -0.16
YBX3-202ENST00000279550 C10orf25Q5T742 122 aa14.03□□□□□ -0.16
YBX3-202ENST00000279550 LINC01556Q5JQF7 62 aa14.02□□□□□ -0.16
YBX3-202ENST00000279550 LINC00337Q8N6G1 96 aa14.01□□□□□ -0.17
YBX3-202ENST00000279550 ETDBQ3ZM63 59 aa14.01□□□□□ -0.17
YBX3-202ENST00000279550 UNQ6190/PRO20217Q6UXQ8 127 aa14.01□□□□□ -0.17
YBX3-202ENST00000279550 CLEC2BQ92478 149 aa14.01□□□□□ -0.17
YBX3-202ENST00000279550 DYNC2H1Q8NCM8 4307 aaKnown RBP14□□□□□ -0.17
YBX3-202ENST00000279550 ATXN8Q156A1 80 aa13.99□□□□□ -0.17
YBX3-202ENST00000279550 MUC7Q8TAX7 377 aa13.99□□□□□ -0.17
YBX3-202ENST00000279550 UPK3BQ9BT76 320 aa13.98□□□□□ -0.17
YBX3-202ENST00000279550 WWC2-AS2Q96NR7 200 aa13.98□□□□□ -0.17
YBX3-202ENST00000279550 C9JAW5 83 aa13.97□□□□□ -0.17
YBX3-202ENST00000279550 DNAH10OSP0CZ25 163 aa13.97□□□□□ -0.17
YBX3-202ENST00000279550 LINC01620Q4KN68 170 aa13.97□□□□□ -0.17
YBX3-202ENST00000279550 TRAV13-2A0A0B4J235 113 aa13.96□□□□□ -0.17
YBX3-202ENST00000279550 K7ERU9 68 aa13.96□□□□□ -0.17
YBX3-202ENST00000279550 COX6CP09669 75 aa13.96□□□□□ -0.17
YBX3-202ENST00000279550 COX17Q14061 63 aa13.95□□□□□ -0.18
YBX3-202ENST00000279550 RNF151Q2KHN1 245 aa13.95□□□□□ -0.18
YBX3-202ENST00000279550 TGP01266 2768 aa13.95□□□□□ -0.18
YBX3-202ENST00000279550 STARD9Q9P2P6 4700 aa13.95□□□□□ -0.18
YBX3-202ENST00000279550 NTN5Q8WTR8 489 aaPredicted RBP13.95□□□□□ -0.18
YBX3-202ENST00000279550 LYSTQ99698 3801 aa13.94□□□□□ -0.18
YBX3-202ENST00000279550 LST1O00453 97 aa13.93□□□□□ -0.18
YBX3-202ENST00000279550 HIGD2BQ4VC39 106 aa13.93□□□□□ -0.18
YBX3-202ENST00000279550 SLC25A20O43772 301 aa13.93□□□□□ -0.18
YBX3-202ENST00000279550 UBE2DNLQ8IWF7 75 aa13.93□□□□□ -0.18
YBX3-202ENST00000279550 C15orf56Q8N910 161 aa13.93□□□□□ -0.18
YBX3-202ENST00000279550 Q8NDZ9 215 aa13.91□□□□□ -0.18
YBX3-202ENST00000279550 C1orf43Q9BWL3 253 aa13.91□□□□□ -0.18
YBX3-202ENST00000279550 C6orf48Q9UBA6 75 aa13.91□□□□□ -0.18
YBX3-202ENST00000279550 IGKV2D-24A0A075B6R9 120 aa13.9□□□□□ -0.18
YBX3-202ENST00000279550 PRR3P79522 188 aaKnown RBP13.9□□□□□ -0.18
YBX3-202ENST00000279550 PLECQ15149 4684 aaKnown RBP13.9□□□□□ -0.18
YBX3-202ENST00000279550 RPL28P46779 137 aaKnown RBP13.9□□□□□ -0.18
YBX3-202ENST00000279550 SMIM11BQ8TCY0 68 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms