RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 SPAG11BQ08648 103 aa8.89□□□□□ -0.99
ACER3-201ENST00000278544 MIAQ16674 131 aa8.89□□□□□ -0.99
ACER3-201ENST00000278544 NHP2Q9NX24 153 aaKnown RBP8.89□□□□□ -0.99
ACER3-201ENST00000278544 LINC00158P58513 81 aa8.89□□□□□ -0.99
ACER3-201ENST00000278544 CFAP161Q6P656 301 aa8.89□□□□□ -0.99
ACER3-201ENST00000278544 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
ACER3-201ENST00000278544 H7C2G1 150 aa8.88□□□□□ -0.99
ACER3-201ENST00000278544 PSCAO43653 123 aa8.88□□□□□ -0.99
ACER3-201ENST00000278544 BVES-AS1Q5T3Y7 98 aa8.88□□□□□ -0.99
ACER3-201ENST00000278544 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
ACER3-201ENST00000278544 ZNF561-AS1K7EIQ3 104 aa8.86□□□□□ -0.99
ACER3-201ENST00000278544 DNAH1Q9P2D7 4330 aa8.86□□□□□ -0.99
ACER3-201ENST00000278544 WFDC2Q14508 124 aa8.86□□□□□ -0.99
ACER3-201ENST00000278544 MUSTN1Q8IVN3 82 aa8.86□□□□□ -0.99
ACER3-201ENST00000278544 WWC2-AS2Q96NR7 200 aa8.86□□□□□ -0.99
ACER3-201ENST00000278544 DLEU1O43261 78 aa8.85□□□□□ -0.99
ACER3-201ENST00000278544 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
ACER3-201ENST00000278544 HSD52Q0P140 79 aa8.84□□□□□ -0.99
ACER3-201ENST00000278544 FAM19A3Q7Z5A8 133 aa8.84□□□□□ -0.99
ACER3-201ENST00000278544 IBA57-AS1B1ANH7 110 aa8.84□□□□□ -0.99
ACER3-201ENST00000278544 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
ACER3-201ENST00000278544 TRAV8-4A0A0B4J246 113 aa8.84□□□□□ -0.99
ACER3-201ENST00000278544 A0A1B0GV90 55 aa8.83□□□□□ -1
ACER3-201ENST00000278544 NDUFA1O15239 70 aa8.83□□□□□ -1
ACER3-201ENST00000278544 CEND1Q8N111 149 aa8.83□□□□□ -1
ACER3-201ENST00000278544 KIAA0087Q14695 138 aa8.83□□□□□ -1
ACER3-201ENST00000278544 KRTAP26-1Q6PEX3 210 aa8.83□□□□□ -1
ACER3-201ENST00000278544 CAMK2N2Q96S95 79 aa8.83□□□□□ -1
ACER3-201ENST00000278544 USP17L23D6RBM5 183 aa8.82□□□□□ -1
ACER3-201ENST00000278544 XAGE1AQ9HD64 81 aa8.82□□□□□ -1
ACER3-201ENST00000278544 A4D1N5 150 aa8.82□□□□□ -1
ACER3-201ENST00000278544 C15orf56Q8N910 161 aa8.82□□□□□ -1
ACER3-201ENST00000278544 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
ACER3-201ENST00000278544 GAGE2EQ4V326 116 aa8.81□□□□□ -1
ACER3-201ENST00000278544 LITAFQ99732 161 aa8.81□□□□□ -1
ACER3-201ENST00000278544 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
ACER3-201ENST00000278544 TMEM238C9JI98 176 aa8.81□□□□□ -1
ACER3-201ENST00000278544 CIRBPQ14011 172 aaKnown RBP8.81□□□□□ -1
ACER3-201ENST00000278544 UPK3BQ9BT76 320 aa8.81□□□□□ -1
ACER3-201ENST00000278544 NBDYA0A0U1RRE5 68 aa8.8□□□□□ -1
ACER3-201ENST00000278544 SOSTDC1Q6X4U4 206 aa8.8□□□□□ -1
ACER3-201ENST00000278544 Q6ZRU5 148 aa8.8□□□□□ -1
ACER3-201ENST00000278544 HIGD1BQ9P298 99 aa8.8□□□□□ -1
ACER3-201ENST00000278544 ERG28Q9UKR5 140 aa8.8□□□□□ -1
ACER3-201ENST00000278544 Q8IZM0 81 aa8.79□□□□□ -1
ACER3-201ENST00000278544 COL5A1-AS1Q5SY13 56 aa8.78□□□□□ -1
ACER3-201ENST00000278544 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
ACER3-201ENST00000278544 DYNC2H1Q8NCM8 4307 aaKnown RBP8.77□□□□□ -1.01
ACER3-201ENST00000278544 SLPIP03973 132 aa8.77□□□□□ -1.01
ACER3-201ENST00000278544 H3BUT2 72 aa8.76□□□□□ -1.01
ACER3-201ENST00000278544 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
ACER3-201ENST00000278544 VPS13DQ5THJ4 4388 aa8.75□□□□□ -1.01
ACER3-201ENST00000278544 RPL18AQ02543 176 aaKnown RBP8.75□□□□□ -1.01
ACER3-201ENST00000278544 Q1RN00 199 aa8.75□□□□□ -1.01
ACER3-201ENST00000278544 A6NDN8 102 aa8.75□□□□□ -1.01
ACER3-201ENST00000278544 HYDINQ4G0P3 5121 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 CFC1BP0CG36 223 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 CFC1P0CG37 223 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 NTN5Q8WTR8 489 aaPredicted RBP8.74□□□□□ -1.01
ACER3-201ENST00000278544 TAX1BP3O14907 124 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 HERV-K104P63124 156 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 RMI2Q96E14 147 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 TM2D2Q9BX73 214 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 OR13C6PQ8NH95 151 aa8.74□□□□□ -1.01
ACER3-201ENST00000278544 SYCNQ0VAF6 134 aa8.73□□□□□ -1.01
ACER3-201ENST00000278544 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
ACER3-201ENST00000278544 GAGE2BQ13066 116 aa8.73□□□□□ -1.01
ACER3-201ENST00000278544 LOC107984156A0A0G2JMH3 177 aa8.72□□□□□ -1.01
ACER3-201ENST00000278544 RPL24P83731 157 aaKnown RBP8.72□□□□□ -1.01
ACER3-201ENST00000278544 ARL17AQ8IVW1 177 aa8.72□□□□□ -1.01
ACER3-201ENST00000278544 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
ACER3-201ENST00000278544 SND1-IT1Q9HBX3 110 aa8.72□□□□□ -1.01
ACER3-201ENST00000278544 NCR3O14931 201 aa8.72□□□□□ -1.01
ACER3-201ENST00000278544 Q8NDZ9 215 aa8.71□□□□□ -1.01
ACER3-201ENST00000278544 SPANXB1Q9NS25 103 aaPredicted RBP8.71□□□□□ -1.01
ACER3-201ENST00000278544 VAMP3Q15836 100 aa8.71□□□□□ -1.02
ACER3-201ENST00000278544 MTURNQ8N3F0 131 aa8.71□□□□□ -1.02
ACER3-201ENST00000278544 GAGE10A6NGK3 116 aa8.7□□□□□ -1.02
ACER3-201ENST00000278544 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
ACER3-201ENST00000278544 TMEM238LA0A1B0GVL6 79 aa8.7□□□□□ -1.02
ACER3-201ENST00000278544 A6NJY4 79 aa8.7□□□□□ -1.02
ACER3-201ENST00000278544 TTC32Q5I0X7 151 aa8.7□□□□□ -1.02
ACER3-201ENST00000278544 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
ACER3-201ENST00000278544 TAL2Q16559 108 aa8.7□□□□□ -1.02
ACER3-201ENST00000278544 Q6ZRP5 223 aa8.69□□□□□ -1.02
ACER3-201ENST00000278544 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
ACER3-201ENST00000278544 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
ACER3-201ENST00000278544 CXCL5P42830 114 aa8.68□□□□□ -1.02
ACER3-201ENST00000278544 PSMB2P49721 201 aa8.68□□□□□ -1.02
ACER3-201ENST00000278544 GVQW2A0A096LPI5 108 aaPredicted RBP8.68□□□□□ -1.02
ACER3-201ENST00000278544 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
ACER3-201ENST00000278544 FAM168BA1KXE4 195 aa8.67□□□□□ -1.02
ACER3-201ENST00000278544 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
ACER3-201ENST00000278544 DPH3Q96FX2 82 aa8.67□□□□□ -1.02
ACER3-201ENST00000278544 SCGB1C2P0DMR2 95 aa8.67□□□□□ -1.02
ACER3-201ENST00000278544 LINC01561Q8N1V8 128 aa8.66□□□□□ -1.02
ACER3-201ENST00000278544 PRO1854Q9UHT4 67 aa8.66□□□□□ -1.02
ACER3-201ENST00000278544 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
ACER3-201ENST00000278544 TSPAN13O95857 204 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms