RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 NAV3Q8IVL0 2385 aa8.46□□□□□ -1.05
SHPRH-201ENST00000275233 CCDC179H3BU77 68 aa8.46□□□□□ -1.06
SHPRH-201ENST00000275233 SPINK1P00995 79 aa8.46□□□□□ -1.06
SHPRH-201ENST00000275233 LYPD5Q6UWN5 251 aa8.46□□□□□ -1.06
SHPRH-201ENST00000275233 ABCA2Q9BZC7 2435 aa8.45□□□□□ -1.06
SHPRH-201ENST00000275233 ADAMTSL4-AS1Q5T5F5 129 aa8.45□□□□□ -1.06
SHPRH-201ENST00000275233 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
SHPRH-201ENST00000275233 LINC00208Q96KT6 92 aa8.44□□□□□ -1.06
SHPRH-201ENST00000275233 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
SHPRH-201ENST00000275233 Q6Q795 121 aa8.44□□□□□ -1.06
SHPRH-201ENST00000275233 CNFNQ9BYD5 112 aa8.44□□□□□ -1.06
SHPRH-201ENST00000275233 CCDC168Q8NDH2 2452 aa8.43□□□□□ -1.06
SHPRH-201ENST00000275233 LINC01547P58512 204 aaPredicted RBP8.43□□□□□ -1.06
SHPRH-201ENST00000275233 PRLHP81277 87 aa8.43□□□□□ -1.06
SHPRH-201ENST00000275233 EP400Q96L91 3159 aa8.43□□□□□ -1.06
SHPRH-201ENST00000275233 URB1-AS1Q96HZ7 61 aa8.43□□□□□ -1.06
SHPRH-201ENST00000275233 CACNA1AO00555 2505 aa8.43□□□□□ -1.06
SHPRH-201ENST00000275233 A0A087WVE0 104 aa8.43□□□□□ -1.06
SHPRH-201ENST00000275233 SBSPONQ8IVN8 264 aa8.42□□□□□ -1.06
SHPRH-201ENST00000275233 XGP55808 180 aa8.42□□□□□ -1.06
SHPRH-201ENST00000275233 FSHBP01225 129 aa8.41□□□□□ -1.06
SHPRH-201ENST00000275233 Q6ZRU5 148 aa8.41□□□□□ -1.06
SHPRH-201ENST00000275233 NDUFC1O43677 76 aa8.41□□□□□ -1.06
SHPRH-201ENST00000275233 V9GYY9 64 aa8.41□□□□□ -1.06
SHPRH-201ENST00000275233 LINC00575Q6W349 94 aa8.4□□□□□ -1.06
SHPRH-201ENST00000275233 A0A087WSZ3 146 aa8.4□□□□□ -1.06
SHPRH-201ENST00000275233 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.07
SHPRH-201ENST00000275233 TRBV7-6A0A0J9YX20 115 aa8.39□□□□□ -1.07
SHPRH-201ENST00000275233 COX7CP15954 63 aa8.39□□□□□ -1.07
SHPRH-201ENST00000275233 FHL3Q13643 280 aa8.39□□□□□ -1.07
SHPRH-201ENST00000275233 Q6JHZ5 121 aa8.39□□□□□ -1.07
SHPRH-201ENST00000275233 SOSTDC1Q6X4U4 206 aa8.39□□□□□ -1.07
SHPRH-201ENST00000275233 C2orf48Q96LS8 159 aa8.39□□□□□ -1.07
SHPRH-201ENST00000275233 LINC00310P59036 64 aa8.39□□□□□ -1.07
SHPRH-201ENST00000275233 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
SHPRH-201ENST00000275233 MUC7Q8TAX7 377 aa8.38□□□□□ -1.07
SHPRH-201ENST00000275233 IGF2RP11717 2491 aa8.38□□□□□ -1.07
SHPRH-201ENST00000275233 PRYO14603 147 aa8.37□□□□□ -1.07
SHPRH-201ENST00000275233 IMUPQ9GZP8 106 aa8.37□□□□□ -1.07
SHPRH-201ENST00000275233 AMELXQ99217 191 aa8.36□□□□□ -1.07
SHPRH-201ENST00000275233 MDFIQ99750 246 aa8.36□□□□□ -1.07
SHPRH-201ENST00000275233 MUC4Q99102 2169 aa8.36□□□□□ -1.07
SHPRH-201ENST00000275233 BEAN1Q3B7T3 259 aa8.35□□□□□ -1.07
SHPRH-201ENST00000275233 NCOR2Q9Y618 2525 aa8.34□□□□□ -1.07
SHPRH-201ENST00000275233 C22orf24Q9Y442 160 aa8.34□□□□□ -1.07
SHPRH-201ENST00000275233 C10orf142B7Z368 130 aa8.34□□□□□ -1.07
SHPRH-201ENST00000275233 H0Y9P7 68 aa8.33□□□□□ -1.08
SHPRH-201ENST00000275233 SMCR5Q8TEV8 140 aa8.33□□□□□ -1.08
SHPRH-201ENST00000275233 MYO18BQ8IUG5 2567 aa8.33□□□□□ -1.08
SHPRH-201ENST00000275233 CSDC2Q9Y534 153 aaKnown RBP8.33□□□□□ -1.08
SHPRH-201ENST00000275233 TRAV7A0A075B6U4 112 aa8.32□□□□□ -1.08
SHPRH-201ENST00000275233 A0A1B0GUV1 79 aa8.32□□□□□ -1.08
SHPRH-201ENST00000275233 HCG22E2RYF7 251 aa8.32□□□□□ -1.08
SHPRH-201ENST00000275233 Q8N3U1 123 aa8.32□□□□□ -1.08
SHPRH-201ENST00000275233 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
SHPRH-201ENST00000275233 C2CD3Q4AC94 2353 aa8.31□□□□□ -1.08
SHPRH-201ENST00000275233 WDR87Q6ZQQ6 2873 aa8.31□□□□□ -1.08
SHPRH-201ENST00000275233 NHLRC4P0CG21 123 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-201ENST00000275233 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
SHPRH-201ENST00000275233 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
SHPRH-201ENST00000275233 Q9UF83 564 aa8.3□□□□□ -1.08
SHPRH-201ENST00000275233 A0A096LNJ9 63 aa8.3□□□□□ -1.08
SHPRH-201ENST00000275233 PSPHP1O15172 72 aa8.29□□□□□ -1.08
SHPRH-201ENST00000275233 LINC00337Q8N6G1 96 aa8.29□□□□□ -1.08
SHPRH-201ENST00000275233 CHTF8P0CG12 524 aa8.29□□□□□ -1.08
SHPRH-201ENST00000275233 DOPEY1Q5JWR5 2465 aa8.28□□□□□ -1.08
SHPRH-201ENST00000275233 CRYGAP11844 174 aa8.28□□□□□ -1.08
SHPRH-201ENST00000275233 KIAA0087Q14695 138 aa8.28□□□□□ -1.08
SHPRH-201ENST00000275233 TRBV7-7A0A0K0K1E9 115 aa8.28□□□□□ -1.08
SHPRH-201ENST00000275233 MOBPQ13875 183 aa8.28□□□□□ -1.08
SHPRH-201ENST00000275233 LIMD2Q9BT23 127 aa8.27□□□□□ -1.09
SHPRH-201ENST00000275233 C11orf72Q8NBR9 251 aa8.27□□□□□ -1.09
SHPRH-201ENST00000275233 GOLGB1Q14789 3259 aaKnown RBP8.26□□□□□ -1.09
SHPRH-201ENST00000275233 F8WDY8 70 aa8.25□□□□□ -1.09
SHPRH-201ENST00000275233 COL27A1Q8IZC6 1860 aaPredicted RBP8.25□□□□□ -1.09
SHPRH-201ENST00000275233 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
SHPRH-201ENST00000275233 COX8CQ7Z4L0 72 aa8.24□□□□□ -1.09
SHPRH-201ENST00000275233 C7orf65Q6ZTY9 151 aa8.24□□□□□ -1.09
SHPRH-201ENST00000275233 LINC00846Q9NV44 126 aa8.24□□□□□ -1.09
SHPRH-201ENST00000275233 KRTAP24-1Q3LI83 254 aa8.24□□□□□ -1.09
SHPRH-201ENST00000275233 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
SHPRH-201ENST00000275233 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
SHPRH-201ENST00000275233 C1orf195Q5TG92 126 aa8.22□□□□□ -1.09
SHPRH-201ENST00000275233 Q8N2B8 174 aa8.22□□□□□ -1.09
SHPRH-201ENST00000275233 C6orf48Q9UBA6 75 aa8.22□□□□□ -1.09
SHPRH-201ENST00000275233 PMAIP1Q13794 54 aa8.22□□□□□ -1.09
SHPRH-201ENST00000275233 PTPRBP23467 1997 aa8.22□□□□□ -1.09
SHPRH-201ENST00000275233 SMIM29Q86T20 159 aa8.21□□□□□ -1.09
SHPRH-201ENST00000275233 LINC00315P59091 139 aa8.21□□□□□ -1.1
SHPRH-201ENST00000275233 KIF25-AS1Q9Y6Z4 181 aa8.21□□□□□ -1.1
SHPRH-201ENST00000275233 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.1
SHPRH-201ENST00000275233 LRRK2Q5S007 2527 aa8.2□□□□□ -1.1
SHPRH-201ENST00000275233 LINC01561Q8N1V8 128 aa8.2□□□□□ -1.1
SHPRH-201ENST00000275233 RTL8CO15255 209 aa8.19□□□□□ -1.1
SHPRH-201ENST00000275233 C16orf90A8MZG2 172 aa8.18□□□□□ -1.1
SHPRH-201ENST00000275233 CENPFP49454 3210 aa8.17□□□□□ -1.1
SHPRH-201ENST00000275233 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
SHPRH-201ENST00000275233 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
SHPRH-201ENST00000275233 JMJD1CQ15652 2540 aa8.17□□□□□ -1.1
SHPRH-201ENST00000275233 COL4A2P08572 1712 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms